RNA–Protein interactions for RNA: ENST00000561304.5

ZEB1-223, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,383 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-223ENST00000561304 PPP2R3CQ969Q6 453 aa8.22□□□□□ -1.09
ZEB1-223ENST00000561304 IGSF21Q96ID5 467 aa8.22□□□□□ -1.09
ZEB1-223ENST00000561304 ZFP42Q96MM3 310 aa8.22□□□□□ -1.09
ZEB1-223ENST00000561304 CCDC43Q96MW1 224 aaKnown RBP8.22□□□□□ -1.09
ZEB1-223ENST00000561304 POLR3CQ9BUI4 534 aaPredicted RBP8.22□□□□□ -1.09
ZEB1-223ENST00000561304 APOL5Q9BWW9 433 aa8.22□□□□□ -1.09
ZEB1-223ENST00000561304 RSAD1Q9HA92 442 aa8.22□□□□□ -1.09
ZEB1-223ENST00000561304 MARCH5Q9NX47 278 aa8.22□□□□□ -1.09
ZEB1-223ENST00000561304 MIOSQ9NXC5 875 aa8.22□□□□□ -1.09
ZEB1-223ENST00000561304 PRKAG3Q9UGI9 489 aa8.22□□□□□ -1.09
ZEB1-223ENST00000561304 USP20Q9Y2K6 914 aa8.22□□□□□ -1.09
ZEB1-223ENST00000561304 ARL5CA6NH57 179 aa8.21□□□□□ -1.1
ZEB1-223ENST00000561304 LRRIQ4A6NIV6 560 aa8.21□□□□□ -1.1
ZEB1-223ENST00000561304 CFAP99D6REC4 459 aa8.21□□□□□ -1.1
ZEB1-223ENST00000561304 ASAP2O43150 1006 aa8.21□□□□□ -1.1
ZEB1-223ENST00000561304 CLASP2O75122 1294 aaKnown RBP8.21□□□□□ -1.1
ZEB1-223ENST00000561304 NPTXRO95502 500 aa8.21□□□□□ -1.1
ZEB1-223ENST00000561304 SKIP12755 728 aa8.21□□□□□ -1.1
ZEB1-223ENST00000561304 RPA1P27694 616 aa8.21□□□□□ -1.1
ZEB1-223ENST00000561304 MLH1P40692 756 aa8.21□□□□□ -1.1
ZEB1-223ENST00000561304 ALDH7A1P49419 539 aaKnown RBP8.21□□□□□ -1.1
ZEB1-223ENST00000561304 ORC2Q13416 577 aaPredicted RBP8.21□□□□□ -1.1
ZEB1-223ENST00000561304 SMC1AQ14683 1233 aaKnown RBP8.21□□□□□ -1.1
ZEB1-223ENST00000561304 CDCA2Q69YH5 1023 aaPredicted RBP8.21□□□□□ -1.1
ZEB1-223ENST00000561304 PDE12Q6L8Q7 609 aaKnown RBP8.21□□□□□ -1.1
ZEB1-223ENST00000561304 ANKRD54Q6NXT1 300 aa8.21□□□□□ -1.1
ZEB1-223ENST00000561304 KANK3Q6NY19 840 aa8.21□□□□□ -1.1
ZEB1-223ENST00000561304 NOTUMQ6P988 496 aa8.21□□□□□ -1.1
ZEB1-223ENST00000561304 TMEM184AQ6ZMB5 413 aa8.21□□□□□ -1.1
ZEB1-223ENST00000561304 TRIM67Q6ZTA4 783 aa8.21□□□□□ -1.1
ZEB1-223ENST00000561304 TMC7Q7Z402 723 aa8.21□□□□□ -1.1
ZEB1-223ENST00000561304 VPS52Q8N1B4 723 aa8.21□□□□□ -1.1
ZEB1-223ENST00000561304 TMEM169Q96HH4 297 aa8.21□□□□□ -1.1
ZEB1-223ENST00000561304 TMX3Q96JJ7 454 aa8.21□□□□□ -1.1
ZEB1-223ENST00000561304 GAD1Q99259 594 aa8.21□□□□□ -1.1
ZEB1-223ENST00000561304 CDCA3Q99618 268 aaPredicted RBP8.21□□□□□ -1.1
ZEB1-223ENST00000561304 KIFC3Q9BVG8 833 aa8.21□□□□□ -1.1
ZEB1-223ENST00000561304 APOL6Q9BWW8 343 aa8.21□□□□□ -1.1
ZEB1-223ENST00000561304 C1QTNF1Q9BXJ1 281 aa8.21□□□□□ -1.1
ZEB1-223ENST00000561304 NFKBIZQ9BYH8 718 aa8.21□□□□□ -1.1
ZEB1-223ENST00000561304 CSRNP2Q9H175 543 aa8.21□□□□□ -1.1
ZEB1-223ENST00000561304 S1PR5Q9H228 398 aa8.21□□□□□ -1.1
ZEB1-223ENST00000561304 CXCL16Q9H2A7 254 aa8.21□□□□□ -1.1
ZEB1-223ENST00000561304 NGRNQ9NPE2 291 aaKnown RBP8.21□□□□□ -1.1
ZEB1-223ENST00000561304 CACNG4Q9UBN1 327 aa8.21□□□□□ -1.1
ZEB1-223ENST00000561304 MUTYHQ9UIF7 546 aa8.21□□□□□ -1.1
ZEB1-223ENST00000561304 DBR1Q9UK59 544 aaKnown RBP8.21□□□□□ -1.1
ZEB1-223ENST00000561304 FAM50BQ9Y247 325 aa8.21□□□□□ -1.1
ZEB1-223ENST00000561304 HCFC2Q9Y5Z7 792 aa8.21□□□□□ -1.1
ZEB1-223ENST00000561304 DMDP11532 3685 aa8.2□□□□□ -1.1
ZEB1-223ENST00000561304 MYO15AQ9UKN7 3530 aa8.2□□□□□ -1.1
ZEB1-223ENST00000561304 CNTNAP2Q9UHC6 1331 aa8.2□□□□□ -1.1
ZEB1-223ENST00000561304 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.2□□□□□ -1.1
ZEB1-223ENST00000561304 LOC730098B7Z3J9 87 aa8.2□□□□□ -1.1
ZEB1-223ENST00000561304 NRP1O14786 923 aa8.2□□□□□ -1.1
ZEB1-223ENST00000561304 INPPL1O15357 1258 aa8.2□□□□□ -1.1
ZEB1-223ENST00000561304 GDF9O60383 454 aa8.2□□□□□ -1.1
ZEB1-223ENST00000561304 GPR37L1O60883 481 aa8.2□□□□□ -1.1
ZEB1-223ENST00000561304 SSBP05455 408 aaKnown RBP eCLIP8.2□□□□□ -1.1
ZEB1-223ENST00000561304 CTSAP10619 480 aa8.2□□□□□ -1.1
ZEB1-223ENST00000561304 XRCC6P12956 609 aaKnown RBP eCLIP8.2□□□□□ -1.11e-8■■■■■ 35.6
ZEB1-223ENST00000561304 ITGA4P13612 1032 aa8.2□□□□□ -1.1
ZEB1-223ENST00000561304 EPCAMP16422 314 aa8.2□□□□□ -1.1
ZEB1-223ENST00000561304 AKAP5P24588 427 aa8.2□□□□□ -1.1
ZEB1-223ENST00000561304 GJB2P29033 226 aa8.2□□□□□ -1.1
ZEB1-223ENST00000561304 CDC25AP30304 524 aa8.2□□□□□ -1.1
ZEB1-223ENST00000561304 CA8P35219 290 aa8.2□□□□□ -1.1
ZEB1-223ENST00000561304 CCT6AP40227 531 aaKnown RBP8.2□□□□□ -1.1
ZEB1-223ENST00000561304 TRAPPC10P48553 1259 aa8.2□□□□□ -1.1
ZEB1-223ENST00000561304 SCNN1GP51170 649 aa8.2□□□□□ -1.1
ZEB1-223ENST00000561304 KRT17Q04695 432 aa8.2□□□□□ -1.1
ZEB1-223ENST00000561304 RNASELQ05823 741 aaKnown RBP8.2□□□□□ -1.1
ZEB1-223ENST00000561304 POU5F1BQ06416 359 aa8.2□□□□□ -1.1
ZEB1-223ENST00000561304 GNL2Q13823 731 aaKnown RBP8.2□□□□□ -1.1
ZEB1-223ENST00000561304 TFDP1Q14186 410 aa8.2□□□□□ -1.1
ZEB1-223ENST00000561304 PTPN14Q15678 1187 aa8.2□□□□□ -1.1
ZEB1-223ENST00000561304 QPCTQ16769 361 aa8.2□□□□□ -1.1
ZEB1-223ENST00000561304 TMEM31Q5JXX7 168 aa8.2□□□□□ -1.1
ZEB1-223ENST00000561304 USP34Q70CQ2 3546 aa8.2□□□□□ -1.1
ZEB1-223ENST00000561304 KCNK18Q7Z418 384 aa8.2□□□□□ -1.1
ZEB1-223ENST00000561304 DDX53Q86TM3 631 aaKnown RBP8.2□□□□□ -1.1
ZEB1-223ENST00000561304 RNF135Q8IUD6 432 aa8.2□□□□□ -1.1
ZEB1-223ENST00000561304 COLGALT2Q8IYK4 626 aa8.2□□□□□ -1.1
ZEB1-223ENST00000561304 MRPL43Q8N983 215 aaKnown RBP8.2□□□□□ -1.1
ZEB1-223ENST00000561304 IGSF22Q8N9C0 903 aa8.2□□□□□ -1.1
ZEB1-223ENST00000561304 GSTCDQ8NEC7 633 aa8.2□□□□□ -1.1
ZEB1-223ENST00000561304 URGCPQ8TCY9 931 aa8.2□□□□□ -1.1
ZEB1-223ENST00000561304 PGBD4Q96DM1 585 aa8.2□□□□□ -1.1
ZEB1-223ENST00000561304 TBC1D32Q96NH3 1257 aa8.2□□□□□ -1.1
ZEB1-223ENST00000561304 NACC1Q96RE7 527 aa8.2□□□□□ -1.1
ZEB1-223ENST00000561304 NOTCH4Q99466 2003 aa8.2□□□□□ -1.1
ZEB1-223ENST00000561304 MMTAG2Q9BU76 263 aaKnown RBP8.2□□□□□ -1.1
ZEB1-223ENST00000561304 CCDC113Q9H0I3 377 aa8.2□□□□□ -1.1
ZEB1-223ENST00000561304 PDZD7Q9H5P4 517 aa8.2□□□□□ -1.1
ZEB1-223ENST00000561304 PUF60Q9UHX1 559 aaKnown RBP8.2□□□□□ -1.1
ZEB1-223ENST00000561304 NOL7Q9UMY1 257 aaKnown RBP8.2□□□□□ -1.1
ZEB1-223ENST00000561304 VPS13AQ96RL7 3174 aa8.2□□□□□ -1.1
ZEB1-223ENST00000561304 TSC2P49815 1807 aa8.19□□□□□ -1.1
ZEB1-223ENST00000561304 A0A1B0GUA9 196 aa8.19□□□□□ -1.1
ZEB1-223ENST00000561304 ARHGEF35A5YM69 484 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms