RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 CEP120Q8N960 986 aa17.58■□□□□ 0.4
LMX1B-204ENST00000561065 SNX21Q969T3 373 aa17.58■□□□□ 0.4
LMX1B-204ENST00000561065 IFT74Q96LB3 600 aa17.58■□□□□ 0.4
LMX1B-204ENST00000561065 FBXL18Q96ME1 805 aa17.58■□□□□ 0.4
LMX1B-204ENST00000561065 MRPL17Q9NRX2 175 aaKnown RBP17.58■□□□□ 0.4
LMX1B-204ENST00000561065 CHST7Q9NS84 486 aa17.58■□□□□ 0.4
LMX1B-204ENST00000561065 ARHGAP28Q9P2N2 729 aa17.58■□□□□ 0.4
LMX1B-204ENST00000561065 STK39Q9UEW8 545 aa17.58■□□□□ 0.4
LMX1B-204ENST00000561065 DNM3Q9UQ16 869 aa17.58■□□□□ 0.4
LMX1B-204ENST00000561065 MYO10Q9HD67 2058 aa17.58■□□□□ 0.4
LMX1B-204ENST00000561065 CASTOR2A6NHX0 329 aa17.57■□□□□ 0.4
LMX1B-204ENST00000561065 C2CD4DB7Z1M9 353 aa17.57■□□□□ 0.4
LMX1B-204ENST00000561065 KIF4AO95239 1232 aa17.57■□□□□ 0.4
LMX1B-204ENST00000561065 KLRC2P26717 231 aa17.57■□□□□ 0.4
LMX1B-204ENST00000561065 DSG1Q02413 1049 aa17.57■□□□□ 0.4
LMX1B-204ENST00000561065 ZRSR1Q15695 479 aaKnown RBP17.57■□□□□ 0.4
LMX1B-204ENST00000561065 TMEM132AQ24JP5 1023 aa17.57■□□□□ 0.4
LMX1B-204ENST00000561065 TMEM119Q4V9L6 283 aa17.57■□□□□ 0.4
LMX1B-204ENST00000561065 ATF7IP2Q5U623 682 aa17.57■□□□□ 0.4
LMX1B-204ENST00000561065 CES5AQ6NT32 575 aa17.57■□□□□ 0.4
LMX1B-204ENST00000561065 TMC5Q6UXY8 1006 aa17.57■□□□□ 0.4
LMX1B-204ENST00000561065 HASPINQ8TF76 798 aa17.57■□□□□ 0.4
LMX1B-204ENST00000561065 EDAQ92838 391 aa17.57■□□□□ 0.4
LMX1B-204ENST00000561065 PLIN2Q99541 437 aa17.57■□□□□ 0.4
LMX1B-204ENST00000561065 EMILIN2Q9BXX0 1053 aa17.57■□□□□ 0.4
LMX1B-204ENST00000561065 SFXN1Q9H9B4 322 aa17.57■□□□□ 0.4
LMX1B-204ENST00000561065 KCNG1Q9UIX4 513 aa17.57■□□□□ 0.4
LMX1B-204ENST00000561065 ADAM28Q9UKQ2 775 aa17.57■□□□□ 0.4
LMX1B-204ENST00000561065 GDAQ9Y2T3 454 aa17.57■□□□□ 0.4
LMX1B-204ENST00000561065 HCN4Q9Y3Q4 1203 aa17.57■□□□□ 0.4
LMX1B-204ENST00000561065 VPS37CA5D8V6 355 aaPredicted RBP17.56■□□□□ 0.4
LMX1B-204ENST00000561065 ABLIM1O14639 778 aa17.56■□□□□ 0.4
LMX1B-204ENST00000561065 IGFBP6P24592 240 aaPredicted RBP17.56■□□□□ 0.4
LMX1B-204ENST00000561065 EFNA5P52803 228 aa17.56■□□□□ 0.4
LMX1B-204ENST00000561065 SLC12A3P55017 1021 aa17.56■□□□□ 0.4
LMX1B-204ENST00000561065 ZXDAP98168 799 aa17.56■□□□□ 0.4
LMX1B-204ENST00000561065 GRIN1Q05586 938 aa17.56■□□□□ 0.4
LMX1B-204ENST00000561065 RAD51AP2Q09MP3 1159 aa17.56■□□□□ 0.4
LMX1B-204ENST00000561065 TUSC3Q13454 348 aa17.56■□□□□ 0.4
LMX1B-204ENST00000561065 HSP90AA2PQ14568 343 aaPredicted RBP17.56■□□□□ 0.4
LMX1B-204ENST00000561065 DCAF4L1Q3SXM0 396 aa17.56■□□□□ 0.4
LMX1B-204ENST00000561065 GLRA4Q5JXX5 417 aa17.56■□□□□ 0.4
LMX1B-204ENST00000561065 CABP7Q86V35 215 aa17.56■□□□□ 0.4
LMX1B-204ENST00000561065 PPFIBP1Q86W92 1011 aa17.56■□□□□ 0.4
LMX1B-204ENST00000561065 TMEM87AQ8NBN3 555 aa17.56■□□□□ 0.4
LMX1B-204ENST00000561065 NECTIN4Q96NY8 510 aa17.56■□□□□ 0.4
LMX1B-204ENST00000561065 ADPGKQ9BRR6 497 aa17.56■□□□□ 0.4
LMX1B-204ENST00000561065 CDT1Q9H211 546 aa17.56■□□□□ 0.4
LMX1B-204ENST00000561065 RXFP1Q9HBX9 757 aa17.56■□□□□ 0.4
LMX1B-204ENST00000561065 MAN1C1Q9NR34 630 aa17.56■□□□□ 0.4
LMX1B-204ENST00000561065 TSHZ2Q9NRE2 1034 aa17.56■□□□□ 0.4
LMX1B-204ENST00000561065 MYH15Q9Y2K3 1946 aa17.56■□□□□ 0.4
LMX1B-204ENST00000561065 DOCK8Q8NF50 2099 aa17.55■□□□□ 0.4
LMX1B-204ENST00000561065 CCDC169A6NNP5 214 aa17.55■□□□□ 0.4
LMX1B-204ENST00000561065 SFI1A8K8P3 1242 aa17.55■□□□□ 0.4
LMX1B-204ENST00000561065 SLC26A4O43511 780 aa17.55■□□□□ 0.4
LMX1B-204ENST00000561065 MYBP10242 640 aa17.55■□□□□ 0.4
LMX1B-204ENST00000561065 GUCY2CP25092 1073 aa17.55■□□□□ 0.4
LMX1B-204ENST00000561065 PLA2G5P39877 138 aa17.55■□□□□ 0.4
LMX1B-204ENST00000561065 MTHFRP42898 656 aa17.55■□□□□ 0.4
LMX1B-204ENST00000561065 DMP1Q13316 513 aaPredicted RBP17.55■□□□□ 0.4
LMX1B-204ENST00000561065 PTPN21Q16825 1174 aa17.55■□□□□ 0.4
LMX1B-204ENST00000561065 RTP2Q5QGT7 225 aa17.55■□□□□ 0.4
LMX1B-204ENST00000561065 CDK5RAP3Q96JB5 506 aa17.55■□□□□ 0.4
LMX1B-204ENST00000561065 AK8Q96MA6 479 aa17.55■□□□□ 0.4
LMX1B-204ENST00000561065 ACO2Q99798 780 aaKnown RBP17.55■□□□□ 0.4
LMX1B-204ENST00000561065 COLEC11Q9BWP8 271 aa17.55■□□□□ 0.4
LMX1B-204ENST00000561065 NT5C3AQ9H0P0 336 aa17.55■□□□□ 0.4
LMX1B-204ENST00000561065 PTPRHQ9HD43 1115 aa17.55■□□□□ 0.4
LMX1B-204ENST00000561065 TNFSF13BQ9Y275 285 aa17.55■□□□□ 0.4
LMX1B-204ENST00000561065 K7ERI5 159 aa17.54■□□□□ 0.4
LMX1B-204ENST00000561065 MEFVO15553 781 aaPredicted RBP17.54■□□□□ 0.4
LMX1B-204ENST00000561065 NR1I2O75469 434 aa17.54■□□□□ 0.4
LMX1B-204ENST00000561065 ADH1AP07327 375 aa17.54■□□□□ 0.4
LMX1B-204ENST00000561065 RPL17P18621 184 aaKnown RBP17.54■□□□□ 0.4
LMX1B-204ENST00000561065 CACNB1Q02641 598 aaPredicted RBP17.54■□□□□ 0.4
LMX1B-204ENST00000561065 TRIM67Q6ZTA4 783 aa17.54■□□□□ 0.4
LMX1B-204ENST00000561065 GPR149Q86SP6 731 aa17.54■□□□□ 0.4
LMX1B-204ENST00000561065 SYT2Q8N9I0 419 aaPredicted RBP17.54■□□□□ 0.4
LMX1B-204ENST00000561065 DRC1Q96MC2 740 aa17.54■□□□□ 0.4
LMX1B-204ENST00000561065 RIPOR3Q96MK2 946 aa17.54■□□□□ 0.4
LMX1B-204ENST00000561065 PPP1R10Q96QC0 940 aaKnown RBP17.54■□□□□ 0.4
LMX1B-204ENST00000561065 TARS2Q9BW92 718 aaKnown RBP17.54■□□□□ 0.4
LMX1B-204ENST00000561065 SMOC2Q9H3U7 446 aa17.54■□□□□ 0.4
LMX1B-204ENST00000561065 ZSCAN16Q9H4T2 348 aaPredicted RBP17.54■□□□□ 0.4
LMX1B-204ENST00000561065 KMT5AQ9NQR1 393 aa17.54■□□□□ 0.4
LMX1B-204ENST00000561065 DOCK6Q96HP0 2047 aa17.54■□□□□ 0.4
LMX1B-204ENST00000561065 SF3B1O75533 1304 aaKnown RBP eCLIP17.54■□□□□ 0.4
LMX1B-204ENST00000561065 ZDBF2Q9HCK1 2354 aa17.53■□□□□ 0.4
LMX1B-204ENST00000561065 NPHP3-ACAD11A0A0J9YXS1 232 aa17.53■□□□□ 0.4
LMX1B-204ENST00000561065 SLC16A4O15374 487 aa17.53■□□□□ 0.4
LMX1B-204ENST00000561065 GLUD1P00367 558 aa17.53■□□□□ 0.4
LMX1B-204ENST00000561065 THP07101 528 aa17.53■□□□□ 0.4
LMX1B-204ENST00000561065 PLA2G4BP0C869 781 aa17.53■□□□□ 0.4
LMX1B-204ENST00000561065 PROZP22891 400 aa17.53■□□□□ 0.4
LMX1B-204ENST00000561065 USP41Q3LFD5 358 aa17.53■□□□□ 0.4
LMX1B-204ENST00000561065 ZNF568Q3ZCX4 644 aa17.53■□□□□ 0.4
LMX1B-204ENST00000561065 PRSS55Q6UWB4 352 aaPredicted RBP17.53■□□□□ 0.4
LMX1B-204ENST00000561065 GLYCTKQ8IVS8 523 aa17.53■□□□□ 0.4
LMX1B-204ENST00000561065 RIN2Q8WYP3 895 aaPredicted RBP17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms