RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 ATP6V1C1P21283 382 aa14.97□□□□□ -0.01
RABGGTA-220ENST00000560998 DYNC1I2Q13409 638 aaKnown RBP14.97□□□□□ -0.01
RABGGTA-220ENST00000560998 TNFAIP1Q13829 316 aa14.97□□□□□ -0.01
RABGGTA-220ENST00000560998 ZC2HC1CQ53FD0 456 aaPredicted RBP14.97□□□□□ -0.01
RABGGTA-220ENST00000560998 C6orf118Q5T5N4 469 aa14.97□□□□□ -0.01
RABGGTA-220ENST00000560998 DDX42Q86XP3 938 aaKnown RBP eCLIP14.97□□□□□ -0.01
RABGGTA-220ENST00000560998 MCF2L2Q86YR7 1114 aa14.97□□□□□ -0.01
RABGGTA-220ENST00000560998 NEK9Q8TD19 979 aa14.97□□□□□ -0.01
RABGGTA-220ENST00000560998 BORCS6Q96GS4 357 aa14.97□□□□□ -0.01
RABGGTA-220ENST00000560998 LXNQ9BS40 222 aa14.97□□□□□ -0.01
RABGGTA-220ENST00000560998 GINM1Q9NU53 330 aa14.97□□□□□ -0.01
RABGGTA-220ENST00000560998 NOC2LQ9Y3T9 749 aaKnown RBP14.97□□□□□ -0.01
RABGGTA-220ENST00000560998 DPPA5A6NC42 116 aa14.96□□□□□ -0.01
RABGGTA-220ENST00000560998 CEP104O60308 925 aa14.96□□□□□ -0.01
RABGGTA-220ENST00000560998 GJB6O95452 261 aa14.96□□□□□ -0.01
RABGGTA-220ENST00000560998 CCNB1P14635 433 aa14.96□□□□□ -0.01
RABGGTA-220ENST00000560998 ACADSP16219 412 aa14.96□□□□□ -0.01
RABGGTA-220ENST00000560998 GNAZP19086 355 aa14.96□□□□□ -0.01
RABGGTA-220ENST00000560998 PON1P27169 355 aa14.96□□□□□ -0.01
RABGGTA-220ENST00000560998 FLT3P36888 993 aa14.96□□□□□ -0.01
RABGGTA-220ENST00000560998 DNA2P51530 1060 aa14.96□□□□□ -0.01
RABGGTA-220ENST00000560998 CCDC15Q0P6D6 951 aa14.96□□□□□ -0.01
RABGGTA-220ENST00000560998 SNX1Q13596 522 aa14.96□□□□□ -0.01
RABGGTA-220ENST00000560998 DCAF17Q5H9S7 520 aaPredicted RBP14.96□□□□□ -0.01
RABGGTA-220ENST00000560998 TAOK1Q7L7X3 1001 aa14.96□□□□□ -0.01
RABGGTA-220ENST00000560998 ZNF720Q7Z2F6 126 aa14.96□□□□□ -0.01
RABGGTA-220ENST00000560998 FAM133AQ8N9E0 248 aa14.96□□□□□ -0.01
RABGGTA-220ENST00000560998 SH3TC2Q8TF17 1288 aa14.96□□□□□ -0.01
RABGGTA-220ENST00000560998 EZH1Q92800 747 aaPredicted RBP14.96□□□□□ -0.01
RABGGTA-220ENST00000560998 SLC35C1Q96A29 364 aa14.96□□□□□ -0.01
RABGGTA-220ENST00000560998 TRAPPC9Q96Q05 1148 aa14.96□□□□□ -0.01
RABGGTA-220ENST00000560998 IKZF4Q9H2S9 585 aa14.96□□□□□ -0.01
RABGGTA-220ENST00000560998 PABPC3Q9H361 631 aaKnown RBP14.96□□□□□ -0.01
RABGGTA-220ENST00000560998 SLC38A10Q9HBR0 1119 aa14.96□□□□□ -0.01
RABGGTA-220ENST00000560998 RXFP1Q9HBX9 757 aa14.96□□□□□ -0.01
RABGGTA-220ENST00000560998 KCNH7Q9NS40 1196 aa14.96□□□□□ -0.01
RABGGTA-220ENST00000560998 CNOT7Q9UIV1 285 aaKnown RBP14.96□□□□□ -0.01
RABGGTA-220ENST00000560998 NFKBIEO00221 500 aa14.96□□□□□ -0.01
RABGGTA-220ENST00000560998 KRIT1O00522 736 aa14.96□□□□□ -0.01
RABGGTA-220ENST00000560998 RGS16O15492 202 aaPredicted RBP14.96□□□□□ -0.01
RABGGTA-220ENST00000560998 RPS12P25398 132 aaKnown RBP14.96□□□□□ -0.01
RABGGTA-220ENST00000560998 CDC25CP30307 473 aa14.96□□□□□ -0.01
RABGGTA-220ENST00000560998 KLHL30Q0D2K2 578 aa14.96□□□□□ -0.01
RABGGTA-220ENST00000560998 EXOC3L4Q17RC7 722 aa14.96□□□□□ -0.01
RABGGTA-220ENST00000560998 PARP6Q2NL67 630 aa14.96□□□□□ -0.01
RABGGTA-220ENST00000560998 GNPTABQ3T906 1256 aa14.96□□□□□ -0.01
RABGGTA-220ENST00000560998 DENND2CQ68D51 928 aa14.96□□□□□ -0.01
RABGGTA-220ENST00000560998 ANO7Q6IWH7 933 aa14.96□□□□□ -0.01
RABGGTA-220ENST00000560998 ARHGAP22Q7Z5H3 698 aa14.96□□□□□ -0.01
RABGGTA-220ENST00000560998 KLHL23Q8NBE8 558 aa14.96□□□□□ -0.01
RABGGTA-220ENST00000560998 PRCCQ92733 491 aaPredicted RBP14.96□□□□□ -0.01
RABGGTA-220ENST00000560998 GORASP1Q9BQQ3 440 aa14.96□□□□□ -0.01
RABGGTA-220ENST00000560998 FAM167BQ9BTA0 163 aa14.96□□□□□ -0.01
RABGGTA-220ENST00000560998 VCXQ9H320 206 aa14.96□□□□□ -0.01
RABGGTA-220ENST00000560998 WDR35Q9P2L0 1181 aa14.96□□□□□ -0.01
RABGGTA-220ENST00000560998 ARL2BPQ9Y2Y0 163 aa14.96□□□□□ -0.01
RABGGTA-220ENST00000560998 UBIAD1Q9Y5Z9 338 aa14.96□□□□□ -0.01
RABGGTA-220ENST00000560998 ARHGEF35A5YM69 484 aa14.95□□□□□ -0.02
RABGGTA-220ENST00000560998 DDX39AO00148 427 aaKnown RBP14.95□□□□□ -0.02
RABGGTA-220ENST00000560998 DHX15O43143 795 aaKnown RBP14.95□□□□□ -0.02
RABGGTA-220ENST00000560998 ALAS1P13196 640 aa14.95□□□□□ -0.02
RABGGTA-220ENST00000560998 UCHL3P15374 230 aa14.95□□□□□ -0.02
RABGGTA-220ENST00000560998 ARID5AQ03989 594 aa14.95□□□□□ -0.02
RABGGTA-220ENST00000560998 DGKZQ13574 1117 aa14.95□□□□□ -0.02
RABGGTA-220ENST00000560998 CUL3Q13618 768 aa14.95□□□□□ -0.02
RABGGTA-220ENST00000560998 TSNAXIP1Q2TAA8 658 aa14.95□□□□□ -0.02
RABGGTA-220ENST00000560998 TKFCQ3LXA3 575 aa14.95□□□□□ -0.02
RABGGTA-220ENST00000560998 PCNX4Q63HM2 1172 aa14.95□□□□□ -0.02
RABGGTA-220ENST00000560998 STXBP4Q6ZWJ1 553 aa14.95□□□□□ -0.02
RABGGTA-220ENST00000560998 MIER3Q7Z3K6 550 aa14.95□□□□□ -0.02
RABGGTA-220ENST00000560998 FAM178BQ8IXR5 827 aa14.95□□□□□ -0.02
RABGGTA-220ENST00000560998 CPXCR1Q8N123 301 aa14.95□□□□□ -0.02
RABGGTA-220ENST00000560998 SYTL5Q8TDW5 730 aaPredicted RBP14.95□□□□□ -0.02
RABGGTA-220ENST00000560998 PRMT1Q99873 361 aaKnown RBP14.95□□□□□ -0.02
RABGGTA-220ENST00000560998 RNPEPL1Q9HAU8 725 aa14.95□□□□□ -0.02
RABGGTA-220ENST00000560998 RAVER2Q9HCJ3 691 aaKnown RBP14.95□□□□□ -0.02
RABGGTA-220ENST00000560998 AGO4Q9HCK5 861 aaKnown RBP14.95□□□□□ -0.02
RABGGTA-220ENST00000560998 SIX2Q9NPC8 291 aa14.95□□□□□ -0.02
RABGGTA-220ENST00000560998 TTC7AQ9ULT0 858 aaPredicted RBP14.95□□□□□ -0.02
RABGGTA-220ENST00000560998 PACSIN2Q9UNF0 486 aaPredicted RBP14.95□□□□□ -0.02
RABGGTA-220ENST00000560998 PCDHB13Q9Y5F0 798 aa14.95□□□□□ -0.02
RABGGTA-220ENST00000560998 GTPBP10A4D1E9 387 aaKnown RBP14.94□□□□□ -0.02
RABGGTA-220ENST00000560998 TULP1O00294 542 aaPredicted RBP14.94□□□□□ -0.02
RABGGTA-220ENST00000560998 ATP5HO75947 161 aa14.94□□□□□ -0.02
RABGGTA-220ENST00000560998 ANXA13P27216 316 aa14.94□□□□□ -0.02
RABGGTA-220ENST00000560998 PSMC2P35998 433 aaKnown RBP14.94□□□□□ -0.02
RABGGTA-220ENST00000560998 RNASE9P60153 205 aaKnown RBP14.94□□□□□ -0.02
RABGGTA-220ENST00000560998 MKRN3Q13064 507 aaKnown RBP14.94□□□□□ -0.02
RABGGTA-220ENST00000560998 MAPK7Q13164 816 aa14.94□□□□□ -0.02
RABGGTA-220ENST00000560998 CLUL1Q15846 466 aa14.94□□□□□ -0.02
RABGGTA-220ENST00000560998 ODR4Q5SWX8 454 aa14.94□□□□□ -0.02
RABGGTA-220ENST00000560998 TCERG1LQ5VWI1 586 aa14.94□□□□□ -0.02
RABGGTA-220ENST00000560998 IRF2BP2Q7Z5L9 587 aa14.94□□□□□ -0.02
RABGGTA-220ENST00000560998 KSR1Q8IVT5 923 aa14.94□□□□□ -0.02
RABGGTA-220ENST00000560998 FAM186BQ8IYM0 893 aa14.94□□□□□ -0.02
RABGGTA-220ENST00000560998 B4GALNT2Q8NHY0 566 aa14.94□□□□□ -0.02
RABGGTA-220ENST00000560998 MKNK1Q9BUB5 465 aa14.94□□□□□ -0.02
RABGGTA-220ENST00000560998 TRIM4Q9C037 500 aa14.94□□□□□ -0.02
RABGGTA-220ENST00000560998 DDX47Q9H0S4 455 aaKnown RBP14.94□□□□□ -0.02
RABGGTA-220ENST00000560998 CHCHD3Q9NX63 227 aaKnown RBP14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms