RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 PLXNB2O15031 1838 aa4.74□□□□□ -1.65
HERC1-211ENST00000560983 ARAP2Q8WZ64 1704 aa4.73□□□□□ -1.65
HERC1-211ENST00000560983 PRR23AA6NEV1 266 aa4.73□□□□□ -1.65
HERC1-211ENST00000560983 DDTLA6NHG4 134 aaPredicted RBP4.73□□□□□ -1.65
HERC1-211ENST00000560983 SLC15A5A6NIM6 579 aa4.73□□□□□ -1.65
HERC1-211ENST00000560983 PLIN1O60240 522 aa4.73□□□□□ -1.65
HERC1-211ENST00000560983 FGBP02675 491 aa4.73□□□□□ -1.65
HERC1-211ENST00000560983 C8BP07358 591 aa4.73□□□□□ -1.65
HERC1-211ENST00000560983 NASPP49321 788 aaPredicted RBP4.73□□□□□ -1.65
HERC1-211ENST00000560983 CDK7P50613 346 aa4.73□□□□□ -1.65
HERC1-211ENST00000560983 FAM47AQ5JRC9 791 aa4.73□□□□□ -1.65
HERC1-211ENST00000560983 EPHA10Q5JZY3 1008 aa4.73□□□□□ -1.65
HERC1-211ENST00000560983 OTOP2Q7RTS6 562 aa4.73□□□□□ -1.65
HERC1-211ENST00000560983 TMEM199Q8N511 208 aa4.73□□□□□ -1.65
HERC1-211ENST00000560983 TBC1D22AQ8WUA7 517 aa4.73□□□□□ -1.65
HERC1-211ENST00000560983 ATOH1Q92858 354 aaPredicted RBP4.73□□□□□ -1.65
HERC1-211ENST00000560983 MRGPRX3Q96LB0 322 aa4.73□□□□□ -1.65
HERC1-211ENST00000560983 RBM15Q96T37 977 aaKnown RBP eCLIP4.73□□□□□ -1.65
HERC1-211ENST00000560983 UBE2ZQ9H832 354 aaPredicted RBP4.73□□□□□ -1.65
HERC1-211ENST00000560983 IL23AQ9NPF7 189 aa4.73□□□□□ -1.65
HERC1-211ENST00000560983 USP40Q9NVE5 1235 aa4.73□□□□□ -1.65
HERC1-211ENST00000560983 MAP3K2Q9Y2U5 619 aa4.73□□□□□ -1.65
HERC1-211ENST00000560983 SUGT1Q9Y2Z0 365 aa4.73□□□□□ -1.65
HERC1-211ENST00000560983 ZNF318Q5VUA4 2279 aa4.72□□□□□ -1.65
HERC1-211ENST00000560983 ATRXP46100 2492 aa4.72□□□□□ -1.65
HERC1-211ENST00000560983 LRRC37A2A6NM11 1700 aa4.72□□□□□ -1.65
HERC1-211ENST00000560983 ECM29Q5VYK3 1845 aa4.72□□□□□ -1.65
HERC1-211ENST00000560983 CHD6Q8TD26 2715 aa4.72□□□□□ -1.65
HERC1-211ENST00000560983 NPHP3-ACAD11A0A0J9YXS1 232 aa4.72□□□□□ -1.65
HERC1-211ENST00000560983 ANKRD18BA2A2Z9 1011 aa4.72□□□□□ -1.65
HERC1-211ENST00000560983 NPHS1O60500 1241 aa4.72□□□□□ -1.65
HERC1-211ENST00000560983 PGK1P00558 417 aa4.72□□□□□ -1.65
HERC1-211ENST00000560983 CA3P07451 260 aa4.72□□□□□ -1.65
HERC1-211ENST00000560983 KCNA5P22460 613 aa4.72□□□□□ -1.65
HERC1-211ENST00000560983 PPP2R1AP30153 589 aa4.72□□□□□ -1.65
HERC1-211ENST00000560983 CYP2C18P33260 490 aa4.72□□□□□ -1.65
HERC1-211ENST00000560983 RIPK4P57078 832 aa4.72□□□□□ -1.65
HERC1-211ENST00000560983 TAP1Q03518 808 aa4.72□□□□□ -1.65
HERC1-211ENST00000560983 PLP2Q04941 152 aa4.72□□□□□ -1.65
HERC1-211ENST00000560983 CHAF1AQ13111 956 aaPredicted RBP4.72□□□□□ -1.65
HERC1-211ENST00000560983 UBE4AQ14139 1066 aa4.72□□□□□ -1.65
HERC1-211ENST00000560983 GCKRQ14397 625 aa4.72□□□□□ -1.65
HERC1-211ENST00000560983 GRB14Q14449 540 aa4.72□□□□□ -1.65
HERC1-211ENST00000560983 TESK1Q15569 626 aa4.72□□□□□ -1.65
HERC1-211ENST00000560983 HERC4Q5GLZ8 1057 aaPredicted RBP4.72□□□□□ -1.65
HERC1-211ENST00000560983 CCSAPQ6IQ19 270 aaPredicted RBP4.72□□□□□ -1.65
HERC1-211ENST00000560983 KIAA1211LQ6NV74 962 aa4.72□□□□□ -1.65
HERC1-211ENST00000560983 VHLLQ6RSH7 139 aa4.72□□□□□ -1.65
HERC1-211ENST00000560983 UBE3BQ7Z3V4 1068 aa4.72□□□□□ -1.65
HERC1-211ENST00000560983 ADAT2Q7Z6V5 191 aaKnown RBP4.72□□□□□ -1.65
HERC1-211ENST00000560983 ZNF761Q86XN6 746 aaPredicted RBP4.72□□□□□ -1.65
HERC1-211ENST00000560983 NT5DC4Q86YG4 428 aa4.72□□□□□ -1.65
HERC1-211ENST00000560983 TRIM59Q8IWR1 403 aa4.72□□□□□ -1.65
HERC1-211ENST00000560983 NEK9Q8TD19 979 aa4.72□□□□□ -1.65
HERC1-211ENST00000560983 ARNTL2Q8WYA1 636 aa4.72□□□□□ -1.65
HERC1-211ENST00000560983 EDAQ92838 391 aa4.72□□□□□ -1.65
HERC1-211ENST00000560983 RMDN1Q96DB5 314 aa4.72□□□□□ -1.65
HERC1-211ENST00000560983 BORCS6Q96GS4 357 aa4.72□□□□□ -1.65
HERC1-211ENST00000560983 IDI2Q9BXS1 227 aa4.72□□□□□ -1.65
HERC1-211ENST00000560983 STRIP2Q9ULQ0 834 aa4.72□□□□□ -1.65
HERC1-211ENST00000560983 PRRC2BQ5JSZ5 2229 aaKnown RBP4.72□□□□□ -1.65
HERC1-211ENST00000560983 DMXL1Q9Y485 3027 aa4.71□□□□□ -1.66
HERC1-211ENST00000560983 NCOR2Q9Y618 2525 aa4.71□□□□□ -1.66
HERC1-211ENST00000560983 PI4KAP2A4QPH2 592 aa4.71□□□□□ -1.66
HERC1-211ENST00000560983 TMEM221A6NGB7 291 aa4.71□□□□□ -1.66
HERC1-211ENST00000560983 H0Y858 1186 aa4.71□□□□□ -1.66
HERC1-211ENST00000560983 M0R296 226 aa4.71□□□□□ -1.66
HERC1-211ENST00000560983 ENTPD3O75355 529 aa4.71□□□□□ -1.66
HERC1-211ENST00000560983 ITGB3P05106 788 aa4.71□□□□□ -1.66
HERC1-211ENST00000560983 PLS3P13797 630 aa4.71□□□□□ -1.66
HERC1-211ENST00000560983 SLC6A11P48066 632 aa4.71□□□□□ -1.66
HERC1-211ENST00000560983 RGS3P49796 1198 aa4.71□□□□□ -1.66
HERC1-211ENST00000560983 BACE1P56817 501 aa4.71□□□□□ -1.66
HERC1-211ENST00000560983 IRX3P78415 501 aaPredicted RBP4.71□□□□□ -1.66
HERC1-211ENST00000560983 SCRN1Q12765 414 aa4.71□□□□□ -1.66
HERC1-211ENST00000560983 PRR31Q5SQ13 230 aa4.71□□□□□ -1.66
HERC1-211ENST00000560983 KRTAP5-3Q6L8H2 238 aa4.71□□□□□ -1.66
HERC1-211ENST00000560983 KSR2Q6VAB6 950 aa4.71□□□□□ -1.66
HERC1-211ENST00000560983 DCP2Q8IU60 420 aaKnown RBP4.71□□□□□ -1.66
HERC1-211ENST00000560983 RIOX2Q8IUF8 465 aa4.71□□□□□ -1.66
HERC1-211ENST00000560983 CCAR1Q8IX12 1150 aaKnown RBP4.71□□□□□ -1.66
HERC1-211ENST00000560983 PI4KAP1Q8N8J0 262 aa4.71□□□□□ -1.66
HERC1-211ENST00000560983 BVESQ8NE79 360 aa4.71□□□□□ -1.66
HERC1-211ENST00000560983 KLHDC9Q8NEP7 349 aa4.71□□□□□ -1.66
HERC1-211ENST00000560983 GORASP1Q9BQQ3 440 aa4.71□□□□□ -1.66
HERC1-211ENST00000560983 PAGR1Q9BTK6 254 aa4.71□□□□□ -1.66
HERC1-211ENST00000560983 FSD1Q9BTV5 496 aa4.71□□□□□ -1.66
HERC1-211ENST00000560983 KRTAP3-1Q9BYR8 98 aa4.71□□□□□ -1.66
HERC1-211ENST00000560983 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.71□□□□□ -1.66
HERC1-211ENST00000560983 PCDH18Q9HCL0 1135 aa4.71□□□□□ -1.66
HERC1-211ENST00000560983 XPNPEP3Q9NQH7 507 aa4.71□□□□□ -1.66
HERC1-211ENST00000560983 TLR9Q9NR96 1032 aa4.71□□□□□ -1.66
HERC1-211ENST00000560983 NTMQ9P121 344 aa4.71□□□□□ -1.66
HERC1-211ENST00000560983 CLEC1BQ9P126 229 aa4.71□□□□□ -1.66
HERC1-211ENST00000560983 MUTYHQ9UIF7 546 aa4.71□□□□□ -1.66
HERC1-211ENST00000560983 AKT3Q9Y243 479 aa4.71□□□□□ -1.66
HERC1-211ENST00000560983 SLC4A7Q9Y6M7 1214 aa4.71□□□□□ -1.66
HERC1-211ENST00000560983 RLFQ13129 1914 aa4.71□□□□□ -1.66
HERC1-211ENST00000560983 COL4A6Q14031 1691 aa4.7□□□□□ -1.66
HERC1-211ENST00000560983 ARNTLO00327 626 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms