RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 GDAQ9Y2T3 454 aa16.74■□□□□ 0.27
SNRPA1-213ENST00000560856 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.73■□□□□ 0.27
SNRPA1-213ENST00000560856 NRP1O14786 923 aa16.73■□□□□ 0.27
SNRPA1-213ENST00000560856 ACTN4O43707 911 aaKnown RBP16.73■□□□□ 0.27
SNRPA1-213ENST00000560856 ALDH2P05091 517 aa16.73■□□□□ 0.27
SNRPA1-213ENST00000560856 HYAL1Q12794 435 aa16.73■□□□□ 0.27
SNRPA1-213ENST00000560856 GRIK3Q13003 919 aa16.73■□□□□ 0.27
SNRPA1-213ENST00000560856 MAP4K3Q8IVH8 894 aa16.73■□□□□ 0.27
SNRPA1-213ENST00000560856 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.73■□□□□ 0.27
SNRPA1-213ENST00000560856 C7orf25Q9BPX7 421 aa16.73■□□□□ 0.27
SNRPA1-213ENST00000560856 FGFBP2Q9BYJ0 223 aa16.73■□□□□ 0.27
SNRPA1-213ENST00000560856 TLR9Q9NR96 1032 aa16.73■□□□□ 0.27
SNRPA1-213ENST00000560856 OLFML3Q9NRN5 406 aa16.73■□□□□ 0.27
SNRPA1-213ENST00000560856 MARCH5Q9NX47 278 aa16.73■□□□□ 0.27
SNRPA1-213ENST00000560856 TRIP11Q15643 1979 aa16.72■□□□□ 0.27
SNRPA1-213ENST00000560856 A0A1B0GVL5 298 aa16.72■□□□□ 0.27
SNRPA1-213ENST00000560856 CARNS1A5YM72 827 aa16.72■□□□□ 0.27
SNRPA1-213ENST00000560856 ANKRD63C9JTQ0 380 aa16.72■□□□□ 0.27
SNRPA1-213ENST00000560856 FAM189A1O60320 539 aa16.72■□□□□ 0.27
SNRPA1-213ENST00000560856 CSPG5O95196 566 aa16.72■□□□□ 0.27
SNRPA1-213ENST00000560856 IDEP14735 1019 aa16.72■□□□□ 0.27
SNRPA1-213ENST00000560856 PFKFB1P16118 471 aa16.72■□□□□ 0.27
SNRPA1-213ENST00000560856 GTF2F1P35269 517 aaKnown RBP eCLIP16.72■□□□□ 0.27
SNRPA1-213ENST00000560856 CASP5P51878 434 aa16.72■□□□□ 0.27
SNRPA1-213ENST00000560856 KRT17Q04695 432 aa16.72■□□□□ 0.27
SNRPA1-213ENST00000560856 NOLC1Q14978 699 aaKnown RBP eCLIP16.72■□□□□ 0.27
SNRPA1-213ENST00000560856 CTC1Q2NKJ3 1217 aa16.72■□□□□ 0.27
SNRPA1-213ENST00000560856 HERC4Q5GLZ8 1057 aaPredicted RBP16.72■□□□□ 0.27
SNRPA1-213ENST00000560856 APBB1IPQ7Z5R6 666 aaPredicted RBP16.72■□□□□ 0.27
SNRPA1-213ENST00000560856 DDX53Q86TM3 631 aaKnown RBP16.72■□□□□ 0.27
SNRPA1-213ENST00000560856 SLC17A8Q8NDX2 589 aa16.72■□□□□ 0.27
SNRPA1-213ENST00000560856 FAM193BQ96PV7 902 aaPredicted RBP16.72■□□□□ 0.27
SNRPA1-213ENST00000560856 TCHPQ9BT92 498 aa16.72■□□□□ 0.27
SNRPA1-213ENST00000560856 IKZF4Q9H2S9 585 aa16.72■□□□□ 0.27
SNRPA1-213ENST00000560856 MAGEF1Q9HAY2 307 aa16.72■□□□□ 0.27
SNRPA1-213ENST00000560856 PANK4Q9NVE7 773 aa16.72■□□□□ 0.27
SNRPA1-213ENST00000560856 TBC1D7Q9P0N9 293 aa16.72■□□□□ 0.27
SNRPA1-213ENST00000560856 SERTAD1Q9UHV2 236 aa16.72■□□□□ 0.27
SNRPA1-213ENST00000560856 PUF60Q9UHX1 559 aaKnown RBP16.72■□□□□ 0.27
SNRPA1-213ENST00000560856 FAN1Q9Y2M0 1017 aa16.72■□□□□ 0.27
SNRPA1-213ENST00000560856 TDRD15B5MCY1 1934 aaKnown RBP16.71■□□□□ 0.27
SNRPA1-213ENST00000560856 A0A1W2PQ27 194 aa16.71■□□□□ 0.27
SNRPA1-213ENST00000560856 A0A1W2PQ64 194 aa16.71■□□□□ 0.27
SNRPA1-213ENST00000560856 A0A1W2PQD8 194 aa16.71■□□□□ 0.27
SNRPA1-213ENST00000560856 F8W810 466 aa16.71■□□□□ 0.27
SNRPA1-213ENST00000560856 CLDN3O15551 220 aa16.71■□□□□ 0.27
SNRPA1-213ENST00000560856 SLFN14P0C7P3 912 aa16.71■□□□□ 0.27
SNRPA1-213ENST00000560856 CASP1P29466 404 aa16.71■□□□□ 0.27
SNRPA1-213ENST00000560856 OSTNP61366 133 aa16.71■□□□□ 0.27
SNRPA1-213ENST00000560856 TFF2Q03403 129 aa16.71■□□□□ 0.27
SNRPA1-213ENST00000560856 EHHADHQ08426 723 aa16.71■□□□□ 0.27
SNRPA1-213ENST00000560856 KCNA1Q09470 495 aa16.71■□□□□ 0.27
SNRPA1-213ENST00000560856 COASYQ13057 564 aa16.71■□□□□ 0.27
SNRPA1-213ENST00000560856 SKIV2LQ15477 1246 aaKnown RBP16.71■□□□□ 0.27
SNRPA1-213ENST00000560856 PDE12Q6L8Q7 609 aaKnown RBP16.71■□□□□ 0.27
SNRPA1-213ENST00000560856 RNF168Q8IYW5 571 aaPredicted RBP16.71■□□□□ 0.27
SNRPA1-213ENST00000560856 HVCN1Q96D96 273 aa16.71■□□□□ 0.27
SNRPA1-213ENST00000560856 TMEM169Q96HH4 297 aa16.71■□□□□ 0.27
SNRPA1-213ENST00000560856 PPP1R10Q96QC0 940 aaKnown RBP16.71■□□□□ 0.27
SNRPA1-213ENST00000560856 RPS6KC1Q96S38 1066 aa16.71■□□□□ 0.27
SNRPA1-213ENST00000560856 PAAF1Q9BRP4 392 aa16.71■□□□□ 0.27
SNRPA1-213ENST00000560856 CCDC94Q9BW85 323 aaPredicted RBP16.71■□□□□ 0.27
SNRPA1-213ENST00000560856 LRRC27Q9C0I9 530 aa16.71■□□□□ 0.27
SNRPA1-213ENST00000560856 ZBP1Q9H171 429 aa16.71■□□□□ 0.27
SNRPA1-213ENST00000560856 ANKFY1Q9P2R3 1169 aa16.71■□□□□ 0.27
SNRPA1-213ENST00000560856 THEGQ9P2T0 379 aa16.71■□□□□ 0.27
SNRPA1-213ENST00000560856 CACNG4Q9UBN1 327 aa16.71■□□□□ 0.27
SNRPA1-213ENST00000560856 COG5Q9UP83 839 aa16.71■□□□□ 0.27
SNRPA1-213ENST00000560856 STYXL1Q9Y6J8 313 aa16.71■□□□□ 0.27
SNRPA1-213ENST00000560856 XIRP2A4UGR9 3374 aa16.71■□□□□ 0.26
SNRPA1-213ENST00000560856 A0A0B4J269 797 aa16.7■□□□□ 0.26
SNRPA1-213ENST00000560856 HIDE1A8MVS5 230 aa16.7■□□□□ 0.26
SNRPA1-213ENST00000560856 TISP43B9A030 160 aa16.7■□□□□ 0.26
SNRPA1-213ENST00000560856 HNRNPDLO14979 420 aaKnown RBP16.7■□□□□ 0.26
SNRPA1-213ENST00000560856 THP07101 528 aa16.7■□□□□ 0.26
SNRPA1-213ENST00000560856 MYBP10242 640 aa16.7■□□□□ 0.26
SNRPA1-213ENST00000560856 ABCD1P33897 745 aa16.7■□□□□ 0.26
SNRPA1-213ENST00000560856 LTBRP36941 435 aa16.7■□□□□ 0.26
SNRPA1-213ENST00000560856 LIG4P49917 911 aa16.7■□□□□ 0.26
SNRPA1-213ENST00000560856 AMPD3Q01432 767 aa16.7■□□□□ 0.26
SNRPA1-213ENST00000560856 TUSC3Q13454 348 aa16.7■□□□□ 0.26
SNRPA1-213ENST00000560856 SLC10A6Q3KNW5 377 aa16.7■□□□□ 0.26
SNRPA1-213ENST00000560856 SEZ6Q53EL9 994 aa16.7■□□□□ 0.26
SNRPA1-213ENST00000560856 CCDC65Q8IXS2 484 aa16.7■□□□□ 0.26
SNRPA1-213ENST00000560856 GRAMD1CQ8IYS0 662 aa16.7■□□□□ 0.26
SNRPA1-213ENST00000560856 VPS52Q8N1B4 723 aa16.7■□□□□ 0.26
SNRPA1-213ENST00000560856 GLIS3Q8NEA6 775 aa16.7■□□□□ 0.26
SNRPA1-213ENST00000560856 HLA-CQ95604 372 aa16.7■□□□□ 0.26
SNRPA1-213ENST00000560856 HPS3Q969F9 1004 aa16.7■□□□□ 0.26
SNRPA1-213ENST00000560856 PABPC5Q96DU9 382 aaKnown RBP16.7■□□□□ 0.26
SNRPA1-213ENST00000560856 BICD1Q96G01 975 aa16.7■□□□□ 0.26
SNRPA1-213ENST00000560856 SNX27Q96L92 541 aa16.7■□□□□ 0.26
SNRPA1-213ENST00000560856 ZMAT2Q96NC0 199 aaKnown RBP16.7■□□□□ 0.26
SNRPA1-213ENST00000560856 ACAP3Q96P50 834 aa16.7■□□□□ 0.26
SNRPA1-213ENST00000560856 TCF25Q9BQ70 676 aa16.7■□□□□ 0.26
SNRPA1-213ENST00000560856 PYM1Q9BRP8 204 aaKnown RBP16.7■□□□□ 0.26
SNRPA1-213ENST00000560856 GOLPH3LQ9H4A5 285 aa16.7■□□□□ 0.26
SNRPA1-213ENST00000560856 UBE2ZQ9H832 354 aaPredicted RBP16.7■□□□□ 0.26
SNRPA1-213ENST00000560856 MRPL44Q9H9J2 332 aaKnown RBP16.7■□□□□ 0.26
SNRPA1-213ENST00000560856 NGRNQ9NPE2 291 aaKnown RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms