RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 GCP02774 474 aa7.29□□□□□ -1.24
TSPAN3-209ENST00000560715 ESRRAP11474 423 aaPredicted RBP7.29□□□□□ -1.24
TSPAN3-209ENST00000560715 TPP2P29144 1249 aaPredicted RBP7.29□□□□□ -1.24
TSPAN3-209ENST00000560715 MLLT1Q03111 559 aaPredicted RBP7.29□□□□□ -1.24
TSPAN3-209ENST00000560715 TAF7Q15545 349 aaPredicted RBP7.29□□□□□ -1.24
TSPAN3-209ENST00000560715 MTHFD1LQ6UB35 978 aa7.29□□□□□ -1.24
TSPAN3-209ENST00000560715 C6orf89Q6UWU4 347 aa7.29□□□□□ -1.24
TSPAN3-209ENST00000560715 NLRC3Q7RTR2 1065 aa7.29□□□□□ -1.24
TSPAN3-209ENST00000560715 ADAT2Q7Z6V5 191 aaKnown RBP7.29□□□□□ -1.24
TSPAN3-209ENST00000560715 TAX1BP1Q86VP1 789 aa7.29□□□□□ -1.24
TSPAN3-209ENST00000560715 ARHGEF25Q86VW2 580 aa7.29□□□□□ -1.24
TSPAN3-209ENST00000560715 CCDC170Q8IYT3 715 aa7.29□□□□□ -1.24
TSPAN3-209ENST00000560715 ZNF527Q8NB42 609 aa7.29□□□□□ -1.24
TSPAN3-209ENST00000560715 NOA1Q8NC60 698 aaKnown RBP7.29□□□□□ -1.24
TSPAN3-209ENST00000560715 LILRB1Q8NHL6 650 aaPredicted RBP7.29□□□□□ -1.24
TSPAN3-209ENST00000560715 FAM163AQ96GL9 167 aaPredicted RBP7.29□□□□□ -1.24
TSPAN3-209ENST00000560715 MENTQ9BUN1 341 aa7.29□□□□□ -1.24
TSPAN3-209ENST00000560715 TRIT1Q9H3H1 467 aaKnown RBP7.29□□□□□ -1.24
TSPAN3-209ENST00000560715 ELAC1Q9H777 363 aaKnown RBP7.29□□□□□ -1.24
TSPAN3-209ENST00000560715 PHAXQ9H814 394 aaKnown RBP7.29□□□□□ -1.24
TSPAN3-209ENST00000560715 MRPL44Q9H9J2 332 aaKnown RBP7.29□□□□□ -1.24
TSPAN3-209ENST00000560715 HOOK1Q9UJC3 728 aaKnown RBP7.29□□□□□ -1.24
TSPAN3-209ENST00000560715 METRNQ9UJH8 293 aa7.29□□□□□ -1.24
TSPAN3-209ENST00000560715 RCOR1Q9UKL0 485 aa7.29□□□□□ -1.24
TSPAN3-209ENST00000560715 KDM3BQ7LBC6 1761 aa7.29□□□□□ -1.24
TSPAN3-209ENST00000560715 MED1Q15648 1581 aaPredicted RBP7.28□□□□□ -1.24
TSPAN3-209ENST00000560715 MMP20O60882 483 aa7.28□□□□□ -1.24
TSPAN3-209ENST00000560715 ZBED1O96006 694 aa7.28□□□□□ -1.24
TSPAN3-209ENST00000560715 CCDC175P0C221 793 aa7.28□□□□□ -1.24
TSPAN3-209ENST00000560715 ALDH1B1P30837 517 aa7.28□□□□□ -1.24
TSPAN3-209ENST00000560715 SUMO1P63165 101 aaKnown RBP7.28□□□□□ -1.24
TSPAN3-209ENST00000560715 PMS2P11Q13670 270 aa7.28□□□□□ -1.24
TSPAN3-209ENST00000560715 INPP5AQ14642 412 aa7.28□□□□□ -1.24
TSPAN3-209ENST00000560715 NTRK3Q16288 839 aa7.28□□□□□ -1.24
TSPAN3-209ENST00000560715 CCDC178Q5BJE1 867 aa7.28□□□□□ -1.24
TSPAN3-209ENST00000560715 KCNT2Q6UVM3 1135 aa7.28□□□□□ -1.24
TSPAN3-209ENST00000560715 KRT28Q7Z3Y7 464 aa7.28□□□□□ -1.24
TSPAN3-209ENST00000560715 GSTCDQ8NEC7 633 aa7.28□□□□□ -1.24
TSPAN3-209ENST00000560715 HAUS7Q99871 368 aa7.28□□□□□ -1.24
TSPAN3-209ENST00000560715 TTLL2Q9BWV7 592 aa7.28□□□□□ -1.24
TSPAN3-209ENST00000560715 EPN3Q9H201 632 aa7.28□□□□□ -1.24
TSPAN3-209ENST00000560715 HSD3B7Q9H2F3 369 aa7.28□□□□□ -1.24
TSPAN3-209ENST00000560715 MIS18AQ9NYP9 233 aa7.28□□□□□ -1.24
TSPAN3-209ENST00000560715 SUSD2Q9UGT4 822 aa7.28□□□□□ -1.24
TSPAN3-209ENST00000560715 C15orf41Q9Y2V0 281 aa7.28□□□□□ -1.24
TSPAN3-209ENST00000560715 HRH3Q9Y5N1 445 aa7.28□□□□□ -1.24
TSPAN3-209ENST00000560715 RGPD5Q99666 1765 aa7.28□□□□□ -1.24
TSPAN3-209ENST00000560715 CEMIPQ8WUJ3 1361 aa7.28□□□□□ -1.24
TSPAN3-209ENST00000560715 TARSL2A2RTX5 802 aaKnown RBP7.28□□□□□ -1.24
TSPAN3-209ENST00000560715 BUB1BO60566 1050 aaPredicted RBP7.28□□□□□ -1.24
TSPAN3-209ENST00000560715 RNF8O76064 485 aa7.28□□□□□ -1.24
TSPAN3-209ENST00000560715 LINGO3P0C6S8 592 aa7.28□□□□□ -1.24
TSPAN3-209ENST00000560715 DHRS4L1P0CG22 281 aa7.28□□□□□ -1.24
TSPAN3-209ENST00000560715 SRGAP2CP0DJJ0 459 aa7.28□□□□□ -1.24
TSPAN3-209ENST00000560715 EPB41P11171 864 aaKnown RBP7.28□□□□□ -1.24
TSPAN3-209ENST00000560715 JUPP14923 745 aa7.28□□□□□ -1.24
TSPAN3-209ENST00000560715 FOSL1P15407 271 aa7.28□□□□□ -1.24
TSPAN3-209ENST00000560715 IFIT5Q13325 482 aaKnown RBP7.28□□□□□ -1.24
TSPAN3-209ENST00000560715 CRELD2Q6UXH1 353 aaPredicted RBP7.28□□□□□ -1.24
TSPAN3-209ENST00000560715 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.28□□□□□ -1.24
TSPAN3-209ENST00000560715 RAB11FIP4Q86YS3 637 aa7.28□□□□□ -1.24
TSPAN3-209ENST00000560715 ZSCAN18Q8TBC5 510 aaPredicted RBP7.28□□□□□ -1.24
TSPAN3-209ENST00000560715 DPF2Q92785 391 aa7.28□□□□□ -1.24
TSPAN3-209ENST00000560715 TMEM169Q96HH4 297 aa7.28□□□□□ -1.24
TSPAN3-209ENST00000560715 MAGEB10Q96LZ2 347 aaPredicted RBP7.28□□□□□ -1.24
TSPAN3-209ENST00000560715 HAUS2Q9NVX0 235 aa7.28□□□□□ -1.24
TSPAN3-209ENST00000560715 PCDHA11Q9Y5I1 949 aa7.28□□□□□ -1.24
TSPAN3-209ENST00000560715 SNX13Q9Y5W8 968 aa7.28□□□□□ -1.24
TSPAN3-209ENST00000560715 PDLIM1O00151 329 aa7.27□□□□□ -1.25
TSPAN3-209ENST00000560715 MYO1BO43795 1136 aa7.27□□□□□ -1.25
TSPAN3-209ENST00000560715 SERPINC1P01008 464 aa7.27□□□□□ -1.25
TSPAN3-209ENST00000560715 ITGA8P53708 1063 aa7.27□□□□□ -1.25
TSPAN3-209ENST00000560715 NLRP12P59046 1061 aa7.27□□□□□ -1.25
TSPAN3-209ENST00000560715 RELBQ01201 579 aa7.27□□□□□ -1.25
TSPAN3-209ENST00000560715 MYO1EQ12965 1108 aa7.27□□□□□ -1.25
TSPAN3-209ENST00000560715 IFT88Q13099 833 aa7.27□□□□□ -1.25
TSPAN3-209ENST00000560715 PDCLQ13371 301 aa7.27□□□□□ -1.25
TSPAN3-209ENST00000560715 XRCC4Q13426 336 aa7.27□□□□□ -1.25
TSPAN3-209ENST00000560715 UAP1L1Q3KQV9 507 aa7.27□□□□□ -1.25
TSPAN3-209ENST00000560715 TRIM61Q5EBN2 209 aa7.27□□□□□ -1.25
TSPAN3-209ENST00000560715 TMEM240Q5SV17 173 aa7.27□□□□□ -1.25
TSPAN3-209ENST00000560715 CCDC121Q6ZUS5 278 aa7.27□□□□□ -1.25
TSPAN3-209ENST00000560715 GALNT15Q8N3T1 639 aa7.27□□□□□ -1.25
TSPAN3-209ENST00000560715 CCDC33Q8N5R6 958 aa7.27□□□□□ -1.25
TSPAN3-209ENST00000560715 NKAIN3Q8N8D7 197 aa7.27□□□□□ -1.25
TSPAN3-209ENST00000560715 ZNF473Q8WTR7 871 aaKnown RBP7.27□□□□□ -1.25
TSPAN3-209ENST00000560715 KCTD13Q8WZ19 329 aa7.27□□□□□ -1.25
TSPAN3-209ENST00000560715 CUL5Q93034 780 aa7.27□□□□□ -1.25
TSPAN3-209ENST00000560715 RBM41Q96IZ5 413 aaKnown RBP7.27□□□□□ -1.25
TSPAN3-209ENST00000560715 FMNL2Q96PY5 1086 aa7.27□□□□□ -1.25
TSPAN3-209ENST00000560715 ZSCAN10Q96SZ4 725 aaPredicted RBP7.27□□□□□ -1.25
TSPAN3-209ENST00000560715 MEIS3Q99687 375 aa7.27□□□□□ -1.25
TSPAN3-209ENST00000560715 NUP58Q9BVL2 599 aa7.27□□□□□ -1.25
TSPAN3-209ENST00000560715 RMI1Q9H9A7 625 aa7.27□□□□□ -1.25
TSPAN3-209ENST00000560715 VPS9D1Q9Y2B5 631 aa7.27□□□□□ -1.25
TSPAN3-209ENST00000560715 B4DLN1 442 aa7.27□□□□□ -1.25
TSPAN3-209ENST00000560715 CCT4P50991 539 aaKnown RBP7.27□□□□□ -1.25
TSPAN3-209ENST00000560715 AKAP17AQ02040 695 aaKnown RBP7.27□□□□□ -1.25
TSPAN3-209ENST00000560715 AP1B1Q10567 949 aa7.27□□□□□ -1.25
TSPAN3-209ENST00000560715 DOK7Q18PE1 504 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms