RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 DLG4P78352 724 aa10.46□□□□□ -0.73
RTF1-206ENST00000560447 STRN3Q13033 797 aa10.46□□□□□ -0.73
RTF1-206ENST00000560447 NEDD9Q14511 834 aa10.46□□□□□ -0.73
RTF1-206ENST00000560447 PLS1Q14651 629 aa10.46□□□□□ -0.73
RTF1-206ENST00000560447 PSMD6Q15008 389 aa10.46□□□□□ -0.73
RTF1-206ENST00000560447 ARHGAP44Q17R89 818 aa10.46□□□□□ -0.73
RTF1-206ENST00000560447 FAM160B1Q5W0V3 765 aa10.46□□□□□ -0.73
RTF1-206ENST00000560447 SWSAP1Q6NVH7 229 aa10.46□□□□□ -0.73
RTF1-206ENST00000560447 C15orf39Q6ZRI6 1047 aa10.46□□□□□ -0.73
RTF1-206ENST00000560447 SND1Q7KZF4 910 aaKnown RBP eCLIP10.46□□□□□ -0.73
RTF1-206ENST00000560447 MAEAQ7L5Y9 396 aa10.46□□□□□ -0.73
RTF1-206ENST00000560447 ARHGEF19Q8IW93 802 aa10.46□□□□□ -0.73
RTF1-206ENST00000560447 UBL4BQ8N7F7 174 aa10.46□□□□□ -0.73
RTF1-206ENST00000560447 RDH13Q8NBN7 331 aa10.46□□□□□ -0.73
RTF1-206ENST00000560447 TRPM4Q8TD43 1214 aa10.46□□□□□ -0.73
RTF1-206ENST00000560447 PLEKHO2Q8TD55 490 aa10.46□□□□□ -0.73
RTF1-206ENST00000560447 EPS8L1Q8TE68 723 aa10.46□□□□□ -0.73
RTF1-206ENST00000560447 AFAP1L1Q8TED9 768 aa10.46□□□□□ -0.73
RTF1-206ENST00000560447 FBXO41Q8TF61 875 aa10.46□□□□□ -0.73
RTF1-206ENST00000560447 POMGNT1Q8WZA1 660 aa10.46□□□□□ -0.73
RTF1-206ENST00000560447 SEC14L1Q92503 715 aa10.46□□□□□ -0.73
RTF1-206ENST00000560447 LRRC45Q96CN5 670 aa10.46□□□□□ -0.73
RTF1-206ENST00000560447 WNK4Q96J92 1243 aa10.46□□□□□ -0.73
RTF1-206ENST00000560447 RUFY1Q96T51 708 aa10.46□□□□□ -0.73
RTF1-206ENST00000560447 KRT12Q99456 494 aa10.46□□□□□ -0.73
RTF1-206ENST00000560447 FAM129AQ9BZQ8 928 aa10.46□□□□□ -0.73
RTF1-206ENST00000560447 ZMYND15Q9H091 742 aa10.46□□□□□ -0.73
RTF1-206ENST00000560447 WNT8AQ9H1J5 351 aa10.46□□□□□ -0.73
RTF1-206ENST00000560447 PORCNQ9H237 461 aa10.46□□□□□ -0.73
RTF1-206ENST00000560447 IKZF4Q9H2S9 585 aa10.46□□□□□ -0.73
RTF1-206ENST00000560447 TAF1DQ9H5J8 278 aaPredicted RBP10.46□□□□□ -0.73
RTF1-206ENST00000560447 DHX33Q9H6R0 707 aaKnown RBP10.46□□□□□ -0.73
RTF1-206ENST00000560447 SUGCTQ9HAC7 445 aa10.46□□□□□ -0.73
RTF1-206ENST00000560447 GPRC5CQ9NQ84 441 aa10.46□□□□□ -0.73
RTF1-206ENST00000560447 XPNPEP1Q9NQW7 623 aa10.46□□□□□ -0.73
RTF1-206ENST00000560447 ZNF302Q9NR11 478 aa10.46□□□□□ -0.73
RTF1-206ENST00000560447 FAM114A2Q9NRY5 505 aa10.46□□□□□ -0.73
RTF1-206ENST00000560447 NRBP2Q9NSY0 501 aa10.46□□□□□ -0.73
RTF1-206ENST00000560447 RAB20Q9NX57 234 aa10.46□□□□□ -0.73
RTF1-206ENST00000560447 VPS18Q9P253 973 aa10.46□□□□□ -0.73
RTF1-206ENST00000560447 SEPT9Q9UHD8 586 aaPredicted RBP10.46□□□□□ -0.73
RTF1-206ENST00000560447 NOCTQ9UK39 431 aaKnown RBP10.46□□□□□ -0.73
RTF1-206ENST00000560447 GTF3C4Q9UKN8 822 aa10.46□□□□□ -0.73
RTF1-206ENST00000560447 NOC2LQ9Y3T9 749 aaKnown RBP10.46□□□□□ -0.73
RTF1-206ENST00000560447 PCDHGA10Q9Y5H3 936 aa10.46□□□□□ -0.73
RTF1-206ENST00000560447 SNCAIPQ9Y6H5 919 aa10.46□□□□□ -0.73
RTF1-206ENST00000560447 FAM187AA6NFU0 413 aa10.45□□□□□ -0.74
RTF1-206ENST00000560447 ANKRD63C9JTQ0 380 aa10.45□□□□□ -0.74
RTF1-206ENST00000560447 CXCL11O14625 94 aa10.45□□□□□ -0.74
RTF1-206ENST00000560447 HNRNPDLO14979 420 aaKnown RBP10.45□□□□□ -0.74
RTF1-206ENST00000560447 DDX3YO15523 660 aaKnown RBP10.45□□□□□ -0.74
RTF1-206ENST00000560447 BUB1BO60566 1050 aaPredicted RBP10.45□□□□□ -0.74
RTF1-206ENST00000560447 RNF40O75150 1001 aa10.45□□□□□ -0.74
RTF1-206ENST00000560447 USP2O75604 605 aaPredicted RBP10.45□□□□□ -0.74
RTF1-206ENST00000560447 MYBL1P10243 752 aa10.45□□□□□ -0.74
RTF1-206ENST00000560447 MYBL2P10244 700 aa10.45□□□□□ -0.74
RTF1-206ENST00000560447 MATR3P43243 847 aaKnown RBP eCLIP10.45□□□□□ -0.74
RTF1-206ENST00000560447 PDE6CP51160 858 aa10.45□□□□□ -0.74
RTF1-206ENST00000560447 ALDH5A1P51649 535 aaPredicted RBP10.45□□□□□ -0.74
RTF1-206ENST00000560447 CDR2Q01850 454 aa10.45□□□□□ -0.74
RTF1-206ENST00000560447 GRM1Q13255 1194 aa10.45□□□□□ -0.74
RTF1-206ENST00000560447 DGKZQ13574 1117 aa10.45□□□□□ -0.74
RTF1-206ENST00000560447 MTMR3Q13615 1198 aa10.45□□□□□ -0.74
RTF1-206ENST00000560447 DHX34Q14147 1143 aaKnown RBP10.45□□□□□ -0.74
RTF1-206ENST00000560447 EMC2Q15006 297 aa10.45□□□□□ -0.74
RTF1-206ENST00000560447 LRIG3Q6UXM1 1119 aa10.45□□□□□ -0.74
RTF1-206ENST00000560447 TRIM72Q6ZMU5 477 aa10.45□□□□□ -0.74
RTF1-206ENST00000560447 CBWD2Q8IUF1 395 aa10.45□□□□□ -0.74
RTF1-206ENST00000560447 CCDC60Q8IWA6 550 aaPredicted RBP10.45□□□□□ -0.74
RTF1-206ENST00000560447 HELQQ8TDG4 1101 aa10.45□□□□□ -0.74
RTF1-206ENST00000560447 HDAC7Q8WUI4 952 aa10.45□□□□□ -0.74
RTF1-206ENST00000560447 MS4A14Q96JA4 679 aa10.45□□□□□ -0.74
RTF1-206ENST00000560447 PSMB7Q99436 277 aa10.45□□□□□ -0.74
RTF1-206ENST00000560447 JPH2Q9BR39 696 aaPredicted RBP10.45□□□□□ -0.74
RTF1-206ENST00000560447 ZBED2Q9BTP6 218 aa10.45□□□□□ -0.74
RTF1-206ENST00000560447 PLVAPQ9BX97 442 aa10.45□□□□□ -0.74
RTF1-206ENST00000560447 RAB17Q9H0T7 212 aa10.45□□□□□ -0.74
RTF1-206ENST00000560447 POLR3FQ9H1D9 316 aaPredicted RBP10.45□□□□□ -0.74
RTF1-206ENST00000560447 EPB41L5Q9HCM4 733 aa10.45□□□□□ -0.74
RTF1-206ENST00000560447 AVENQ9NQS1 362 aaPredicted RBP10.45□□□□□ -0.74
RTF1-206ENST00000560447 ADARB2Q9NS39 739 aaKnown RBP10.45□□□□□ -0.74
RTF1-206ENST00000560447 CWC15Q9P013 229 aaKnown RBP10.45□□□□□ -0.74
RTF1-206ENST00000560447 LCMT1Q9UIC8 334 aa10.45□□□□□ -0.74
RTF1-206ENST00000560447 FAN1Q9Y2M0 1017 aa10.45□□□□□ -0.74
RTF1-206ENST00000560447 CSADQ9Y600 493 aa10.45□□□□□ -0.74
RTF1-206ENST00000560447 KRIT1O00522 736 aa10.44□□□□□ -0.74
RTF1-206ENST00000560447 RAD51CO43502 376 aa10.44□□□□□ -0.74
RTF1-206ENST00000560447 FTLP02792 175 aaPredicted RBP10.44□□□□□ -0.74
RTF1-206ENST00000560447 CYP1A2P05177 515 aa10.44□□□□□ -0.74
RTF1-206ENST00000560447 IVLP07476 585 aa10.44□□□□□ -0.74
RTF1-206ENST00000560447 GLI1P08151 1106 aa10.44□□□□□ -0.74
RTF1-206ENST00000560447 CTNNA2P26232 953 aa10.44□□□□□ -0.74
RTF1-206ENST00000560447 ARL2P36404 184 aa10.44□□□□□ -0.74
RTF1-206ENST00000560447 HSPA9P38646 679 aaKnown RBP10.44□□□□□ -0.74
RTF1-206ENST00000560447 IREB2P48200 963 aaKnown RBP10.44□□□□□ -0.74
RTF1-206ENST00000560447 LIG4P49917 911 aa10.44□□□□□ -0.74
RTF1-206ENST00000560447 EFNA5P52803 228 aa10.44□□□□□ -0.74
RTF1-206ENST00000560447 POLGP54098 1239 aaPredicted RBP10.44□□□□□ -0.74
RTF1-206ENST00000560447 DRG2P55039 364 aaKnown RBP10.44□□□□□ -0.74
RTF1-206ENST00000560447 PTENP60484 403 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms