RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 BRAPQ7Z569 592 aa15.5■□□□□ 0.07
TPM1-223ENST00000560445 CMASQ8NFW8 434 aaPredicted RBP15.5■□□□□ 0.07
TPM1-223ENST00000560445 AUTS2Q8WXX7 1259 aa15.5■□□□□ 0.07
TPM1-223ENST00000560445 UROC1Q96N76 676 aa15.5■□□□□ 0.07
TPM1-223ENST00000560445 CCDC94Q9BW85 323 aaPredicted RBP15.5■□□□□ 0.07
TPM1-223ENST00000560445 APOL5Q9BWW9 433 aa15.5■□□□□ 0.07
TPM1-223ENST00000560445 MRPL4Q9BYD3 311 aaKnown RBP15.5■□□□□ 0.07
TPM1-223ENST00000560445 CCDC113Q9H0I3 377 aa15.5■□□□□ 0.07
TPM1-223ENST00000560445 PLEKHA4Q9H4M7 779 aa15.5■□□□□ 0.07
TPM1-223ENST00000560445 RXFP1Q9HBX9 757 aa15.5■□□□□ 0.07
TPM1-223ENST00000560445 MARCH5Q9NX47 278 aa15.5■□□□□ 0.07
TPM1-223ENST00000560445 FNIP2Q9P278 1114 aa15.5■□□□□ 0.07
TPM1-223ENST00000560445 A0A087WWV3 80 aa15.49■□□□□ 0.07
TPM1-223ENST00000560445 TMEM221A6NGB7 291 aa15.49■□□□□ 0.07
TPM1-223ENST00000560445 M0R296 226 aa15.49■□□□□ 0.07
TPM1-223ENST00000560445 C2CD2LO14523 706 aa15.49■□□□□ 0.07
TPM1-223ENST00000560445 EPCAMP16422 314 aa15.49■□□□□ 0.07
TPM1-223ENST00000560445 GUCY2CP25092 1073 aa15.49■□□□□ 0.07
TPM1-223ENST00000560445 TOB1P50616 345 aaPredicted RBP15.49■□□□□ 0.07
TPM1-223ENST00000560445 STRN3Q13033 797 aa15.49■□□□□ 0.07
TPM1-223ENST00000560445 NBR1Q14596 966 aa15.49■□□□□ 0.07
TPM1-223ENST00000560445 LARP1BQ659C4 914 aaKnown RBP15.49■□□□□ 0.07
TPM1-223ENST00000560445 FUT10Q6P4F1 479 aa15.49■□□□□ 0.07
TPM1-223ENST00000560445 GPR149Q86SP6 731 aa15.49■□□□□ 0.07
TPM1-223ENST00000560445 ZDHHC14Q8IZN3 488 aa15.49■□□□□ 0.07
TPM1-223ENST00000560445 TBC1D32Q96NH3 1257 aa15.49■□□□□ 0.07
TPM1-223ENST00000560445 VN1R3Q9BXE9 311 aa15.49■□□□□ 0.07
TPM1-223ENST00000560445 TMEM134Q9H6X4 195 aa15.49■□□□□ 0.07
TPM1-223ENST00000560445 SLC38A7Q9NVC3 462 aa15.49■□□□□ 0.07
TPM1-223ENST00000560445 SORCS3Q9UPU3 1222 aa15.49■□□□□ 0.07
TPM1-223ENST00000560445 TNFSF13BQ9Y275 285 aa15.49■□□□□ 0.07
TPM1-223ENST00000560445 TRAPPC3O43617 180 aa15.48■□□□□ 0.07
TPM1-223ENST00000560445 B4GALT3O60512 393 aa15.48■□□□□ 0.07
TPM1-223ENST00000560445 LILRB3O75022 631 aa15.48■□□□□ 0.07
TPM1-223ENST00000560445 RECQL4O94761 1208 aa15.48■□□□□ 0.07
TPM1-223ENST00000560445 AFF1P51825 1210 aaKnown RBP15.48■□□□□ 0.07
TPM1-223ENST00000560445 RNF168Q8IYW5 571 aaPredicted RBP15.48■□□□□ 0.07
TPM1-223ENST00000560445 BSNDQ8WZ55 320 aa15.48■□□□□ 0.07
TPM1-223ENST00000560445 PBXIP1Q96AQ6 731 aa15.48■□□□□ 0.07
TPM1-223ENST00000560445 CALML4Q96GE6 196 aa15.48■□□□□ 0.07
TPM1-223ENST00000560445 POMKQ9H5K3 350 aa15.48■□□□□ 0.07
TPM1-223ENST00000560445 KMT5AQ9NQR1 393 aa15.48■□□□□ 0.07
TPM1-223ENST00000560445 CHST7Q9NS84 486 aa15.48■□□□□ 0.07
TPM1-223ENST00000560445 ZDHHC7Q9NXF8 308 aa15.48■□□□□ 0.07
TPM1-223ENST00000560445 KLK14Q9P0G3 267 aa15.48■□□□□ 0.07
TPM1-223ENST00000560445 TEX28O15482 410 aa15.47■□□□□ 0.07
TPM1-223ENST00000560445 HIP1RO75146 1068 aa15.47■□□□□ 0.07
TPM1-223ENST00000560445 UBA7P41226 1012 aa15.47■□□□□ 0.07
TPM1-223ENST00000560445 PEX3P56589 373 aa15.47■□□□□ 0.07
TPM1-223ENST00000560445 ZRSR1Q15695 479 aaKnown RBP15.47■□□□□ 0.07
TPM1-223ENST00000560445 ZNF568Q3ZCX4 644 aa15.47■□□□□ 0.07
TPM1-223ENST00000560445 HYIQ5T013 277 aa15.47■□□□□ 0.07
TPM1-223ENST00000560445 KIAA0319Q5VV43 1072 aa15.47■□□□□ 0.07
TPM1-223ENST00000560445 TMC5Q6UXY8 1006 aa15.47■□□□□ 0.07
TPM1-223ENST00000560445 HFE2Q6ZVN8 426 aa15.47■□□□□ 0.07
TPM1-223ENST00000560445 CDR2LQ86X02 465 aaPredicted RBP15.47■□□□□ 0.07
TPM1-223ENST00000560445 RASSF8Q8NHQ8 419 aa15.47■□□□□ 0.07
TPM1-223ENST00000560445 TCHPQ9BT92 498 aa15.47■□□□□ 0.07
TPM1-223ENST00000560445 IRF2BPLQ9H1B7 796 aa15.47■□□□□ 0.07
TPM1-223ENST00000560445 MAN1C1Q9NR34 630 aa15.47■□□□□ 0.07
TPM1-223ENST00000560445 SNTG2Q9NY99 539 aa15.47■□□□□ 0.07
TPM1-223ENST00000560445 LARSQ9P2J5 1176 aaKnown RBP15.47■□□□□ 0.07
TPM1-223ENST00000560445 C5orf42Q9H799 3197 aa15.47■□□□□ 0.07
TPM1-223ENST00000560445 VWA3AA6NCI4 1184 aa15.46■□□□□ 0.07
TPM1-223ENST00000560445 TMEM189-UBE2V1I3L0A0 370 aa15.46■□□□□ 0.07
TPM1-223ENST00000560445 MCF2P10911 925 aa15.46■□□□□ 0.07
TPM1-223ENST00000560445 NPTX2P47972 431 aa15.46■□□□□ 0.07
TPM1-223ENST00000560445 NUBP1P53384 320 aa15.46■□□□□ 0.07
TPM1-223ENST00000560445 KYAT1Q16773 422 aa15.46■□□□□ 0.07
TPM1-223ENST00000560445 LIN9Q5TKA1 542 aa15.46■□□□□ 0.07
TPM1-223ENST00000560445 RINT1Q6NUQ1 792 aa15.46■□□□□ 0.07
TPM1-223ENST00000560445 FBXL6Q8N531 539 aa15.46■□□□□ 0.07
TPM1-223ENST00000560445 GSTCDQ8NEC7 633 aa15.46■□□□□ 0.07
TPM1-223ENST00000560445 SPIRE2Q8WWL2 714 aa15.46■□□□□ 0.07
TPM1-223ENST00000560445 RIN2Q8WYP3 895 aaPredicted RBP15.46■□□□□ 0.07
TPM1-223ENST00000560445 DDX27Q96GQ7 796 aaKnown RBP15.46■□□□□ 0.07
TPM1-223ENST00000560445 TTPALQ9BTX7 342 aa15.46■□□□□ 0.07
TPM1-223ENST00000560445 MIOSQ9NXC5 875 aa15.46■□□□□ 0.07
TPM1-223ENST00000560445 ARHGAP28Q9P2N2 729 aa15.46■□□□□ 0.07
TPM1-223ENST00000560445 MUC6Q6W4X9 2439 aa15.46■□□□□ 0.07
TPM1-223ENST00000560445 C2CD4DB7Z1M9 353 aa15.45■□□□□ 0.06
TPM1-223ENST00000560445 E9PMD0 336 aa15.45■□□□□ 0.06
TPM1-223ENST00000560445 EFEMP2O95967 443 aa15.45■□□□□ 0.06
TPM1-223ENST00000560445 PLS3P13797 630 aa15.45■□□□□ 0.06
TPM1-223ENST00000560445 LONP1P36776 959 aaKnown RBP15.45■□□□□ 0.06
TPM1-223ENST00000560445 GRM5P41594 1212 aa15.45■□□□□ 0.06
TPM1-223ENST00000560445 ECM1Q16610 540 aa15.45■□□□□ 0.06
TPM1-223ENST00000560445 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.45■□□□□ 0.06
TPM1-223ENST00000560445 C1orf186Q6ZWK4 172 aa15.45■□□□□ 0.06
TPM1-223ENST00000560445 RTL10Q7L3V2 364 aa15.45■□□□□ 0.06
TPM1-223ENST00000560445 C12orf76Q8N812 135 aaPredicted RBP15.45■□□□□ 0.06
TPM1-223ENST00000560445 SYT2Q8N9I0 419 aaPredicted RBP15.45■□□□□ 0.06
TPM1-223ENST00000560445 KREMEN2Q8NCW0 462 aa15.45■□□□□ 0.06
TPM1-223ENST00000560445 PIK3R5Q8WYR1 880 aa15.45■□□□□ 0.06
TPM1-223ENST00000560445 NTPCRQ9BSD7 190 aaKnown RBP15.45■□□□□ 0.06
TPM1-223ENST00000560445 KIFC3Q9BVG8 833 aa15.45■□□□□ 0.06
TPM1-223ENST00000560445 PIDD1Q9HB75 910 aa15.45■□□□□ 0.06
TPM1-223ENST00000560445 ODF2LQ9ULJ1 636 aa15.45■□□□□ 0.06
TPM1-223ENST00000560445 GDAQ9Y2T3 454 aa15.45■□□□□ 0.06
TPM1-223ENST00000560445 TECTAO75443 2155 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms