RNA–Protein interactions for RNA: ENST00000560320.1

CRTC3-209, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 4

Gene CRTC3, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-209ENST00000560320 SLAIN1Q8ND83 568 aa11.51□□□□□ -0.57
CRTC3-209ENST00000560320 EHBP1Q8NDI1 1231 aa11.51□□□□□ -0.57
CRTC3-209ENST00000560320 ZNF668Q96K58 619 aaPredicted RBP11.51□□□□□ -0.57
CRTC3-209ENST00000560320 ZBTB45Q96K62 511 aaPredicted RBP11.51□□□□□ -0.57
CRTC3-209ENST00000560320 FAM81BQ96LP2 452 aa11.51□□□□□ -0.57
CRTC3-209ENST00000560320 CCDC42Q96M95 316 aa11.51□□□□□ -0.57
CRTC3-209ENST00000560320 PPP1R16BQ96T49 567 aa11.51□□□□□ -0.57
CRTC3-209ENST00000560320 LUC7LQ9NQ29 371 aaKnown RBP11.51□□□□□ -0.57
CRTC3-209ENST00000560320 PRDM6Q9NQX0 595 aa11.51□□□□□ -0.57
CRTC3-209ENST00000560320 PLAGL2Q9UPG8 496 aa11.51□□□□□ -0.57
CRTC3-209ENST00000560320 TNFSF13BQ9Y275 285 aa11.51□□□□□ -0.57
CRTC3-209ENST00000560320 PPP2R2CQ9Y2T4 447 aa11.51□□□□□ -0.57
CRTC3-209ENST00000560320 ANK1P16157 1881 aa11.51□□□□□ -0.57
CRTC3-209ENST00000560320 MBLAC1A4D2B0 266 aaPredicted RBP11.5□□□□□ -0.57
CRTC3-209ENST00000560320 LRRIQ3A6PVS8 624 aaPredicted RBP11.5□□□□□ -0.57
CRTC3-209ENST00000560320 OFD1O75665 1012 aa11.5□□□□□ -0.57
CRTC3-209ENST00000560320 NOL4O94818 638 aa11.5□□□□□ -0.57
CRTC3-209ENST00000560320 PGK1P00558 417 aa11.5□□□□□ -0.57
CRTC3-209ENST00000560320 MYCNP04198 464 aaPredicted RBP11.5□□□□□ -0.57
CRTC3-209ENST00000560320 RPLP2P05387 115 aaKnown RBP11.5□□□□□ -0.57
CRTC3-209ENST00000560320 ACTN1P12814 892 aa11.5□□□□□ -0.57
CRTC3-209ENST00000560320 HNRNPH3P31942 346 aaKnown RBP11.5□□□□□ -0.57
CRTC3-209ENST00000560320 STAT1P42224 750 aa11.5□□□□□ -0.57
CRTC3-209ENST00000560320 ACOT2P49753 483 aa11.5□□□□□ -0.57
CRTC3-209ENST00000560320 DLG4P78352 724 aa11.5□□□□□ -0.57
CRTC3-209ENST00000560320 NKX3-2P78367 333 aa11.5□□□□□ -0.57
CRTC3-209ENST00000560320 MCL1Q07820 350 aa11.5□□□□□ -0.57
CRTC3-209ENST00000560320 SPA17Q15506 151 aa11.5□□□□□ -0.57
CRTC3-209ENST00000560320 CBWD6Q4V339 395 aa11.5□□□□□ -0.57
CRTC3-209ENST00000560320 WDR44Q5JSH3 913 aa11.5□□□□□ -0.57
CRTC3-209ENST00000560320 CBWD3Q5JTY5 395 aa11.5□□□□□ -0.57
CRTC3-209ENST00000560320 CBWD5Q5RIA9 395 aa11.5□□□□□ -0.57
CRTC3-209ENST00000560320 MARCH8Q5T0T0 291 aa11.5□□□□□ -0.57
CRTC3-209ENST00000560320 E4F1Q66K89 784 aaPredicted RBP11.5□□□□□ -0.57
CRTC3-209ENST00000560320 TRIM65Q6PJ69 517 aa11.5□□□□□ -0.57
CRTC3-209ENST00000560320 RNF180Q86T96 592 aa11.5□□□□□ -0.57
CRTC3-209ENST00000560320 VPS36Q86VN1 386 aa11.5□□□□□ -0.57
CRTC3-209ENST00000560320 KIAA0319LQ8IZA0 1049 aa11.5□□□□□ -0.57
CRTC3-209ENST00000560320 NME8Q8N427 588 aa11.5□□□□□ -0.57
CRTC3-209ENST00000560320 ZSWIM2Q8NEG5 633 aa11.5□□□□□ -0.57
CRTC3-209ENST00000560320 BAP1Q92560 729 aa11.5□□□□□ -0.57
CRTC3-209ENST00000560320 ZBTB10Q96DT7 871 aa11.5□□□□□ -0.57
CRTC3-209ENST00000560320 PPP1R13BQ96KQ4 1090 aa11.5□□□□□ -0.57
CRTC3-209ENST00000560320 CGRRF1Q99675 332 aa11.5□□□□□ -0.57
CRTC3-209ENST00000560320 TMEM117Q9H0C3 514 aa11.5□□□□□ -0.57
CRTC3-209ENST00000560320 RPF1Q9H9Y2 349 aaKnown RBP11.5□□□□□ -0.57
CRTC3-209ENST00000560320 HDAC6Q9UBN7 1215 aa11.5□□□□□ -0.57
CRTC3-209ENST00000560320 FHOD1Q9Y613 1164 aa11.5□□□□□ -0.57
CRTC3-209ENST00000560320 BZW2Q9Y6E2 419 aaKnown RBP11.5□□□□□ -0.57
CRTC3-209ENST00000560320 EPN1Q9Y6I3 576 aaPredicted RBP11.5□□□□□ -0.57
CRTC3-209ENST00000560320 CNTNAP2Q9UHC6 1331 aa11.5□□□□□ -0.57
CRTC3-209ENST00000560320 FRMPD3Q5JV73 1810 aa11.49□□□□□ -0.57
CRTC3-209ENST00000560320 EPHB6O15197 1021 aa11.49□□□□□ -0.57
CRTC3-209ENST00000560320 AKR1B10O60218 316 aa11.49□□□□□ -0.57
CRTC3-209ENST00000560320 PHACTR2O75167 634 aa11.49□□□□□ -0.57
CRTC3-209ENST00000560320 CABYRO75952 493 aa11.49□□□□□ -0.57
CRTC3-209ENST00000560320 CLSTN1O94985 981 aa11.49□□□□□ -0.57
CRTC3-209ENST00000560320 IL18RAPO95256 599 aa11.49□□□□□ -0.57
CRTC3-209ENST00000560320 NDUFA10O95299 355 aa11.49□□□□□ -0.57
CRTC3-209ENST00000560320 MCF2P10911 925 aa11.49□□□□□ -0.57
CRTC3-209ENST00000560320 TNNT1P13805 278 aa11.49□□□□□ -0.57
CRTC3-209ENST00000560320 FERP16591 822 aa11.49□□□□□ -0.57
CRTC3-209ENST00000560320 CST5P28325 142 aaPredicted RBP11.49□□□□□ -0.57
CRTC3-209ENST00000560320 CCND3P30281 292 aaPredicted RBP11.49□□□□□ -0.57
CRTC3-209ENST00000560320 MFAP3P55082 362 aa11.49□□□□□ -0.57
CRTC3-209ENST00000560320 MCCD1P59942 119 aaPredicted RBP11.49□□□□□ -0.57
CRTC3-209ENST00000560320 PPP3CAQ08209 521 aa11.49□□□□□ -0.57
CRTC3-209ENST00000560320 KLHL30Q0D2K2 578 aa11.49□□□□□ -0.57
CRTC3-209ENST00000560320 TRIM32Q13049 653 aa11.49□□□□□ -0.57
CRTC3-209ENST00000560320 BIRC3Q13489 604 aa11.49□□□□□ -0.57
CRTC3-209ENST00000560320 EPC2Q52LR7 807 aa11.49□□□□□ -0.57
CRTC3-209ENST00000560320 FAM47CQ5HY64 1035 aa11.49□□□□□ -0.57
CRTC3-209ENST00000560320 TAF2Q6P1X5 1199 aa11.49□□□□□ -0.57
CRTC3-209ENST00000560320 RAD9BQ6WBX8 426 aa11.49□□□□□ -0.57
CRTC3-209ENST00000560320 CATSPER4Q7RTX7 472 aa11.49□□□□□ -0.57
CRTC3-209ENST00000560320 KIAA1328Q86T90 577 aa11.49□□□□□ -0.57
CRTC3-209ENST00000560320 BRSK2Q8IWQ3 736 aa11.49□□□□□ -0.57
CRTC3-209ENST00000560320 FBXL13Q8NEE6 735 aa11.49□□□□□ -0.57
CRTC3-209ENST00000560320 FAM212AQ96EL1 285 aa11.49□□□□□ -0.57
CRTC3-209ENST00000560320 C16orf45Q96MC5 204 aaPredicted RBP11.49□□□□□ -0.57
CRTC3-209ENST00000560320 NT5C1BQ96P26 610 aa11.49□□□□□ -0.57
CRTC3-209ENST00000560320 CHP1Q99653 195 aa11.49□□□□□ -0.57
CRTC3-209ENST00000560320 STK33Q9BYT3 514 aa11.49□□□□□ -0.57
CRTC3-209ENST00000560320 NHEJ1Q9H9Q4 299 aaPredicted RBP11.49□□□□□ -0.57
CRTC3-209ENST00000560320 IFT122Q9HBG6 1241 aa11.49□□□□□ -0.57
CRTC3-209ENST00000560320 AIPL1Q9NZN9 384 aa11.49□□□□□ -0.57
CRTC3-209ENST00000560320 APEX2Q9UBZ4 518 aa11.49□□□□□ -0.57
CRTC3-209ENST00000560320 DDX20Q9UHI6 824 aaKnown RBP11.49□□□□□ -0.57
CRTC3-209ENST00000560320 DNAJC12Q9UKB3 198 aa11.49□□□□□ -0.57
CRTC3-209ENST00000560320 GINS2Q9Y248 185 aa11.49□□□□□ -0.57
CRTC3-209ENST00000560320 USP20Q9Y2K6 914 aa11.49□□□□□ -0.57
CRTC3-209ENST00000560320 ADGRG1Q9Y653 693 aa11.49□□□□□ -0.57
CRTC3-209ENST00000560320 MUC3AQ02505 3323 aa11.49□□□□□ -0.57
CRTC3-209ENST00000560320 SSU72P8A0A1W2PR75 194 aa11.48□□□□□ -0.57
CRTC3-209ENST00000560320 MYADML2A6NDP7 307 aa11.48□□□□□ -0.57
CRTC3-209ENST00000560320 EIF3CLB5ME19 914 aaKnown RBP11.48□□□□□ -0.57
CRTC3-209ENST00000560320 TREHO43280 583 aa11.48□□□□□ -0.57
CRTC3-209ENST00000560320 ZC3H11AO75152 810 aaKnown RBP eCLIP11.48□□□□□ -0.57
CRTC3-209ENST00000560320 TNNC2P02585 160 aa11.48□□□□□ -0.57
CRTC3-209ENST00000560320 CLTAP09496 248 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms