RNA–Protein interactions for RNA: ENST00000560236.1

LRRC28-218, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 703 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-218ENST00000560236 BMS1Q14692 1282 aaKnown RBP4.96□□□□□ -1.62
LRRC28-218ENST00000560236 ZBTB41Q5SVQ8 909 aa4.96□□□□□ -1.62
LRRC28-218ENST00000560236 KIF18BQ86Y91 864 aa4.96□□□□□ -1.62
LRRC28-218ENST00000560236 FAM9AQ8IZU1 332 aaPredicted RBP4.96□□□□□ -1.62
LRRC28-218ENST00000560236 NXPE1Q8N323 547 aa4.96□□□□□ -1.62
LRRC28-218ENST00000560236 CHTF18Q8WVB6 975 aa4.96□□□□□ -1.62
LRRC28-218ENST00000560236 DNAJC2Q99543 621 aaKnown RBP4.96□□□□□ -1.62
LRRC28-218ENST00000560236 THG1LQ9NWX6 298 aaKnown RBP4.96□□□□□ -1.62
LRRC28-218ENST00000560236 FHOD3Q2V2M9 1422 aa4.96□□□□□ -1.62
LRRC28-218ENST00000560236 CTTNBP2Q8WZ74 1663 aa4.96□□□□□ -1.62
LRRC28-218ENST00000560236 ASMTLO95671 621 aa4.95□□□□□ -1.62
LRRC28-218ENST00000560236 CLK3P49761 638 aaKnown RBP4.95□□□□□ -1.62
LRRC28-218ENST00000560236 NEK4P51957 841 aa4.95□□□□□ -1.62
LRRC28-218ENST00000560236 RNASE9P60153 205 aaKnown RBP4.95□□□□□ -1.62
LRRC28-218ENST00000560236 MGAT5Q09328 741 aa4.95□□□□□ -1.62
LRRC28-218ENST00000560236 CSRP2Q16527 193 aa4.95□□□□□ -1.62
LRRC28-218ENST00000560236 BEAN1Q3B7T3 259 aa4.95□□□□□ -1.62
LRRC28-218ENST00000560236 CCDC178Q5BJE1 867 aa4.95□□□□□ -1.62
LRRC28-218ENST00000560236 GPRIN1Q7Z2K8 1008 aa4.95□□□□□ -1.62
LRRC28-218ENST00000560236 PLXDC1Q8IUK5 500 aa4.95□□□□□ -1.62
LRRC28-218ENST00000560236 SH3TC2Q8TF17 1288 aa4.95□□□□□ -1.62
LRRC28-218ENST00000560236 CAVIN3Q969G5 261 aa4.95□□□□□ -1.62
LRRC28-218ENST00000560236 NCOA1Q15788 1441 aa4.95□□□□□ -1.62
LRRC28-218ENST00000560236 KIF27Q86VH2 1401 aa4.95□□□□□ -1.62
LRRC28-218ENST00000560236 A0A1W2PR48 441 aa4.94□□□□□ -1.62
LRRC28-218ENST00000560236 ZNF891A8MT65 544 aaPredicted RBP4.94□□□□□ -1.62
LRRC28-218ENST00000560236 DIRC3C9JPN6 131 aa4.94□□□□□ -1.62
LRRC28-218ENST00000560236 ZSCAN20P17040 1043 aaPredicted RBP4.94□□□□□ -1.62
LRRC28-218ENST00000560236 BMPR1AP36894 532 aa4.94□□□□□ -1.62
LRRC28-218ENST00000560236 GUCY1B3Q02153 619 aa4.94□□□□□ -1.62
LRRC28-218ENST00000560236 APBA1Q02410 837 aa4.94□□□□□ -1.62
LRRC28-218ENST00000560236 DSG1Q02413 1049 aa4.94□□□□□ -1.62
LRRC28-218ENST00000560236 UBE3CQ15386 1083 aa4.94□□□□□ -1.62
LRRC28-218ENST00000560236 ZKSCAN2Q63HK3 967 aa4.94□□□□□ -1.62
LRRC28-218ENST00000560236 DRICH1Q6PGQ1 229 aaPredicted RBP4.94□□□□□ -1.62
LRRC28-218ENST00000560236 RD3Q7Z3Z2 195 aa4.94□□□□□ -1.62
LRRC28-218ENST00000560236 CPEB3Q8NE35 698 aaKnown RBP4.94□□□□□ -1.62
LRRC28-218ENST00000560236 OR10H5Q8NGA6 315 aa4.94□□□□□ -1.62
LRRC28-218ENST00000560236 MRFAP1L1Q96HT8 127 aa4.94□□□□□ -1.62
LRRC28-218ENST00000560236 COQ10AQ96MF6 247 aa4.94□□□□□ -1.62
LRRC28-218ENST00000560236 TEX101Q9BY14 249 aa4.94□□□□□ -1.62
LRRC28-218ENST00000560236 KANSL2Q9H9L4 492 aa4.94□□□□□ -1.62
LRRC28-218ENST00000560236 SYBUQ9NX95 663 aa4.94□□□□□ -1.62
LRRC28-218ENST00000560236 GOLGA3Q08378 1498 aa4.94□□□□□ -1.62
LRRC28-218ENST00000560236 CAMSAP1Q5T5Y3 1602 aa4.94□□□□□ -1.62
LRRC28-218ENST00000560236 CARMIL1Q5VZK9 1371 aa4.93□□□□□ -1.62
LRRC28-218ENST00000560236 TGM5O43548 720 aa4.93□□□□□ -1.62
LRRC28-218ENST00000560236 HLA-DOAP06340 250 aa4.93□□□□□ -1.62
LRRC28-218ENST00000560236 CLEC2LP0C7M8 214 aa4.93□□□□□ -1.62
LRRC28-218ENST00000560236 HKR1P10072 659 aa4.93□□□□□ -1.62
LRRC28-218ENST00000560236 ZNF37AP17032 561 aaPredicted RBP4.93□□□□□ -1.62
LRRC28-218ENST00000560236 MGAT1P26572 445 aa4.93□□□□□ -1.62
LRRC28-218ENST00000560236 KPNA1P52294 538 aaPredicted RBP4.93□□□□□ -1.62
LRRC28-218ENST00000560236 PPARAQ07869 468 aa4.93□□□□□ -1.62
LRRC28-218ENST00000560236 PTPRKQ15262 1439 aa4.93□□□□□ -1.62
LRRC28-218ENST00000560236 ERCC6LQ2NKX8 1250 aa4.93□□□□□ -1.62
LRRC28-218ENST00000560236 GPR158Q5T848 1215 aa4.93□□□□□ -1.62
LRRC28-218ENST00000560236 LRCH2Q5VUJ6 765 aa4.93□□□□□ -1.62
LRRC28-218ENST00000560236 EFCAB12Q6NXP0 572 aa4.93□□□□□ -1.62
LRRC28-218ENST00000560236 SYT12Q8IV01 421 aa4.93□□□□□ -1.62
LRRC28-218ENST00000560236 GLB1L2Q8IW92 636 aa4.93□□□□□ -1.62
LRRC28-218ENST00000560236 LINC00476Q8WZB0 136 aa4.93□□□□□ -1.62
LRRC28-218ENST00000560236 CDC5LQ99459 802 aaKnown RBP4.93□□□□□ -1.62
LRRC28-218ENST00000560236 R3HDMLQ9H3Y0 253 aa4.93□□□□□ -1.62
LRRC28-218ENST00000560236 TMEM260Q9NX78 707 aa4.93□□□□□ -1.62
LRRC28-218ENST00000560236 POGKQ9P215 609 aa4.93□□□□□ -1.62
LRRC28-218ENST00000560236 INSL6Q9Y581 213 aa4.93□□□□□ -1.62
LRRC28-218ENST00000560236 EPN1Q9Y6I3 576 aaPredicted RBP4.93□□□□□ -1.62
LRRC28-218ENST00000560236 COX11Q9Y6N1 276 aa4.93□□□□□ -1.62
LRRC28-218ENST00000560236 MROH2AA6NES4 1674 aa4.92□□□□□ -1.62
LRRC28-218ENST00000560236 CPS1P31327 1500 aa4.92□□□□□ -1.62
LRRC28-218ENST00000560236 TRAPPC8Q9Y2L5 1435 aa4.92□□□□□ -1.62
LRRC28-218ENST00000560236 PRSS38A1L453 326 aa4.92□□□□□ -1.62
LRRC28-218ENST00000560236 UNC119BA6NIH7 251 aa4.92□□□□□ -1.62
LRRC28-218ENST00000560236 B5MCH6 92 aa4.92□□□□□ -1.62
LRRC28-218ENST00000560236 ZNF185O15231 689 aa4.92□□□□□ -1.62
LRRC28-218ENST00000560236 PRAMEF4O60810 478 aa4.92□□□□□ -1.62
LRRC28-218ENST00000560236 SPATA31D3P0C874 917 aa4.92□□□□□ -1.62
LRRC28-218ENST00000560236 RBP3P10745 1247 aa4.92□□□□□ -1.62
LRRC28-218ENST00000560236 DDX6P26196 483 aaKnown RBP eCLIP4.92□□□□□ -1.62
LRRC28-218ENST00000560236 SEC24CP53992 1094 aa4.92□□□□□ -1.62
LRRC28-218ENST00000560236 ATXN1P54253 815 aaKnown RBP4.92□□□□□ -1.62
LRRC28-218ENST00000560236 PDCD4Q53EL6 469 aaKnown RBP4.92□□□□□ -1.62
LRRC28-218ENST00000560236 COLEC12Q5KU26 742 aa4.92□□□□□ -1.62
LRRC28-218ENST00000560236 BTNL9Q6UXG8 535 aa4.92□□□□□ -1.62
LRRC28-218ENST00000560236 SPATA31D4Q6ZUB0 917 aa4.92□□□□□ -1.62
LRRC28-218ENST00000560236 SYNPOQ8N3V7 929 aa4.92□□□□□ -1.62
LRRC28-218ENST00000560236 ZNF610Q8N9Z0 462 aa4.92□□□□□ -1.62
LRRC28-218ENST00000560236 WDR26Q9H7D7 661 aa4.92□□□□□ -1.62
LRRC28-218ENST00000560236 DKK2Q9UBU2 259 aa4.92□□□□□ -1.62
LRRC28-218ENST00000560236 NUMBLQ9Y6R0 609 aa4.92□□□□□ -1.62
LRRC28-218ENST00000560236 HECW1Q76N89 1606 aa4.92□□□□□ -1.62
LRRC28-218ENST00000560236 ATP10AO60312 1499 aa4.92□□□□□ -1.62
LRRC28-218ENST00000560236 ZNF142P52746 1687 aaPredicted RBP4.92□□□□□ -1.62
LRRC28-218ENST00000560236 SPATA31A6Q5VVP1 1343 aa4.92□□□□□ -1.62
LRRC28-218ENST00000560236 POLR1AO95602 1720 aaPredicted RBP4.92□□□□□ -1.62
LRRC28-218ENST00000560236 ZMYM3Q14202 1370 aa4.91□□□□□ -1.62
LRRC28-218ENST00000560236 C9orf84Q5VXU9 1444 aa4.91□□□□□ -1.62
LRRC28-218ENST00000560236 PIPSLA2A3N6 862 aa4.91□□□□□ -1.62
LRRC28-218ENST00000560236 LCHNA4D1U4 455 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms