RNA–Protein interactions for RNA: ENST00000559658.5

CHRNA3-206, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 1,889 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-206ENST00000559658 NOC2LQ9Y3T9 749 aaKnown RBP18.83■□□□□ 0.6
CHRNA3-206ENST00000559658 KBTBD13C9JR72 458 aa18.82■□□□□ 0.6
CHRNA3-206ENST00000559658 OGTO15294 1046 aa18.82■□□□□ 0.6
CHRNA3-206ENST00000559658 SFPQP23246 707 aaKnown RBP eCLIP18.82■□□□□ 0.6
CHRNA3-206ENST00000559658 PON1P27169 355 aa18.82■□□□□ 0.6
CHRNA3-206ENST00000559658 TRIM71Q2Q1W2 868 aaKnown RBP18.82■□□□□ 0.6
CHRNA3-206ENST00000559658 E4F1Q66K89 784 aaPredicted RBP18.82■□□□□ 0.6
CHRNA3-206ENST00000559658 FAM228AQ86W67 206 aa18.82■□□□□ 0.6
CHRNA3-206ENST00000559658 PPFIBP1Q86W92 1011 aa18.82■□□□□ 0.6
CHRNA3-206ENST00000559658 C17orf53Q8N3J3 647 aaPredicted RBP18.82■□□□□ 0.6
CHRNA3-206ENST00000559658 SLC43A3Q8NBI5 491 aa18.82■□□□□ 0.6
CHRNA3-206ENST00000559658 ARRDC4Q8NCT1 418 aa18.82■□□□□ 0.6
CHRNA3-206ENST00000559658 EIF2AQ9BY44 585 aaKnown RBP18.82■□□□□ 0.6
CHRNA3-206ENST00000559658 SENP6Q9GZR1 1112 aaPredicted RBP18.82■□□□□ 0.6
CHRNA3-206ENST00000559658 CXCL16Q9H2A7 254 aa18.82■□□□□ 0.6
CHRNA3-206ENST00000559658 OGDHLQ9ULD0 1010 aa18.82■□□□□ 0.6
CHRNA3-206ENST00000559658 A0A1B0GUA9 196 aa18.82■□□□□ 0.6
CHRNA3-206ENST00000559658 DNM1LO00429 736 aa18.82■□□□□ 0.6
CHRNA3-206ENST00000559658 CXCL8P10145 99 aa18.82■□□□□ 0.6
CHRNA3-206ENST00000559658 CRYBB1P53674 252 aaPredicted RBP18.82■□□□□ 0.6
CHRNA3-206ENST00000559658 GSDMDP57764 484 aa18.82■□□□□ 0.6
CHRNA3-206ENST00000559658 MCCD1P59942 119 aaPredicted RBP18.82■□□□□ 0.6
CHRNA3-206ENST00000559658 PPP2R3AQ06190 1150 aa18.82■□□□□ 0.6
CHRNA3-206ENST00000559658 PSMD6Q15008 389 aa18.82■□□□□ 0.6
CHRNA3-206ENST00000559658 ENOX2Q16206 610 aaKnown RBP18.82■□□□□ 0.6
CHRNA3-206ENST00000559658 CCDC150Q8NCX0 1101 aa18.82■□□□□ 0.6
CHRNA3-206ENST00000559658 GANQ9H2C0 597 aa18.82■□□□□ 0.6
CHRNA3-206ENST00000559658 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.82■□□□□ 0.6
CHRNA3-206ENST00000559658 TRPV2Q9Y5S1 764 aa18.82■□□□□ 0.6
CHRNA3-206ENST00000559658 TRIP11Q15643 1979 aa18.81■□□□□ 0.6
CHRNA3-206ENST00000559658 AKR1B15C9JRZ8 316 aaPredicted RBP18.81■□□□□ 0.6
CHRNA3-206ENST00000559658 EXOC3L4Q17RC7 722 aa18.81■□□□□ 0.6
CHRNA3-206ENST00000559658 FBXO46Q6PJ61 603 aaPredicted RBP18.81■□□□□ 0.6
CHRNA3-206ENST00000559658 BRSK2Q8IWQ3 736 aa18.81■□□□□ 0.6
CHRNA3-206ENST00000559658 NME8Q8N427 588 aa18.81■□□□□ 0.6
CHRNA3-206ENST00000559658 LMO3Q8TAP4 145 aa18.81■□□□□ 0.6
CHRNA3-206ENST00000559658 DIS3LQ8TF46 1054 aaKnown RBP18.81■□□□□ 0.6
CHRNA3-206ENST00000559658 SEMA4DQ92854 862 aa18.81■□□□□ 0.6
CHRNA3-206ENST00000559658 HES2Q9Y543 173 aa18.81■□□□□ 0.6
CHRNA3-206ENST00000559658 A0A0U1RQG5 324 aaPredicted RBP18.8■□□□□ 0.6
CHRNA3-206ENST00000559658 NPTXRO95502 500 aa18.8■□□□□ 0.6
CHRNA3-206ENST00000559658 TRIM65Q6PJ69 517 aa18.8■□□□□ 0.6
CHRNA3-206ENST00000559658 OR5B17Q8NGF7 314 aa18.8■□□□□ 0.6
CHRNA3-206ENST00000559658 TMC2Q8TDI7 906 aa18.8■□□□□ 0.6
CHRNA3-206ENST00000559658 FAM212AQ96EL1 285 aa18.8■□□□□ 0.6
CHRNA3-206ENST00000559658 NLRC4Q9NPP4 1024 aa18.8■□□□□ 0.6
CHRNA3-206ENST00000559658 ABHD10Q9NUJ1 306 aa18.8■□□□□ 0.6
CHRNA3-206ENST00000559658 CAPN11Q9UMQ6 739 aa18.8■□□□□ 0.6
CHRNA3-206ENST00000559658 PIN4Q9Y237 131 aaKnown RBP18.8■□□□□ 0.6
CHRNA3-206ENST00000559658 NOD1Q9Y239 953 aa18.8■□□□□ 0.6
CHRNA3-206ENST00000559658 FHOD1Q9Y613 1164 aa18.8■□□□□ 0.6
CHRNA3-206ENST00000559658 CITO14578 2027 aa18.8■□□□□ 0.6
CHRNA3-206ENST00000559658 KIAA0391O15091 583 aaKnown RBP18.8■□□□□ 0.6
CHRNA3-206ENST00000559658 KRT9P35527 623 aa18.8■□□□□ 0.6
CHRNA3-206ENST00000559658 MXI1P50539 228 aa18.8■□□□□ 0.6
CHRNA3-206ENST00000559658 EPC2Q52LR7 807 aa18.8■□□□□ 0.6
CHRNA3-206ENST00000559658 HS1BP3Q53T59 392 aa18.8■□□□□ 0.6
CHRNA3-206ENST00000559658 BAP1Q92560 729 aa18.8■□□□□ 0.6
CHRNA3-206ENST00000559658 INTS2Q9H0H0 1204 aaKnown RBP18.8■□□□□ 0.6
CHRNA3-206ENST00000559658 AGO3Q9H9G7 860 aaKnown RBP18.8■□□□□ 0.6
CHRNA3-206ENST00000559658 KIAA1586Q9HCI6 787 aa18.8■□□□□ 0.6
CHRNA3-206ENST00000559658 ARVCFO00192 962 aa18.79■□□□□ 0.6
CHRNA3-206ENST00000559658 LDHAP00338 332 aaKnown RBP18.79■□□□□ 0.6
CHRNA3-206ENST00000559658 STAG3L1P0CL83 205 aa18.79■□□□□ 0.6
CHRNA3-206ENST00000559658 MCF2P10911 925 aa18.79■□□□□ 0.6
CHRNA3-206ENST00000559658 POLR2FP61218 127 aaKnown RBP18.79■□□□□ 0.6
CHRNA3-206ENST00000559658 CDC42EP1Q00587 391 aa18.79■□□□□ 0.6
CHRNA3-206ENST00000559658 PTK7Q13308 1070 aa18.79■□□□□ 0.6
CHRNA3-206ENST00000559658 ZNF618Q5T7W0 954 aa18.79■□□□□ 0.6
CHRNA3-206ENST00000559658 GBP6Q6ZN66 633 aa18.79■□□□□ 0.6
CHRNA3-206ENST00000559658 SV2AQ7L0J3 742 aa18.79■□□□□ 0.6
CHRNA3-206ENST00000559658 EFCAB13Q8IY85 973 aa18.79■□□□□ 0.6
CHRNA3-206ENST00000559658 TAS1R2Q8TE23 839 aa18.79■□□□□ 0.6
CHRNA3-206ENST00000559658 U2AF1L4Q8WU68 220 aaKnown RBP18.79■□□□□ 0.6
CHRNA3-206ENST00000559658 NXF3Q9H4D5 531 aaKnown RBP18.79■□□□□ 0.6
CHRNA3-206ENST00000559658 ZKSCAN5Q9Y2L8 839 aa18.79■□□□□ 0.6
CHRNA3-206ENST00000559658 RALGAPA2Q2PPJ7 1873 aa18.78■□□□□ 0.6
CHRNA3-206ENST00000559658 PNMA6AP0CW24 399 aaPredicted RBP18.78■□□□□ 0.6
CHRNA3-206ENST00000559658 CLDN10P78369 228 aa18.78■□□□□ 0.6
CHRNA3-206ENST00000559658 TRIM14Q14142 442 aa18.78■□□□□ 0.6
CHRNA3-206ENST00000559658 UBXN11Q5T124 520 aa18.78■□□□□ 0.6
CHRNA3-206ENST00000559658 KLHDC7AQ5VTJ3 777 aa18.78■□□□□ 0.6
CHRNA3-206ENST00000559658 TDRD10Q5VZ19 366 aaKnown RBP18.78■□□□□ 0.6
CHRNA3-206ENST00000559658 TRAF7Q6Q0C0 670 aa18.78■□□□□ 0.6
CHRNA3-206ENST00000559658 NEK11Q8NG66 645 aa18.78■□□□□ 0.6
CHRNA3-206ENST00000559658 TMX1Q9H3N1 280 aa18.78■□□□□ 0.6
CHRNA3-206ENST00000559658 RNF19AQ9NV58 838 aa18.78■□□□□ 0.6
CHRNA3-206ENST00000559658 GTPBP10A4D1E9 387 aaKnown RBP18.77■□□□□ 0.6
CHRNA3-206ENST00000559658 LRRC53A6NM62 1247 aa18.77■□□□□ 0.6
CHRNA3-206ENST00000559658 M0QZ92 97 aa18.77■□□□□ 0.6
CHRNA3-206ENST00000559658 GHRP10912 638 aa18.77■□□□□ 0.6
CHRNA3-206ENST00000559658 SKILP12757 684 aa18.77■□□□□ 0.6
CHRNA3-206ENST00000559658 TNNI1P19237 187 aa18.77■□□□□ 0.6
CHRNA3-206ENST00000559658 ATN1P54259 1190 aaPredicted RBP18.77■□□□□ 0.6
CHRNA3-206ENST00000559658 PTPN11Q06124 597 aaPredicted RBP18.77■□□□□ 0.6
CHRNA3-206ENST00000559658 MBTPS1Q14703 1052 aa18.77■□□□□ 0.6
CHRNA3-206ENST00000559658 MTF1Q14872 753 aa18.77■□□□□ 0.6
CHRNA3-206ENST00000559658 FIGNQ5HY92 759 aa18.77■□□□□ 0.6
CHRNA3-206ENST00000559658 C15orf39Q6ZRI6 1047 aa18.77■□□□□ 0.6
CHRNA3-206ENST00000559658 RPAINQ86UA6 219 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms