RNA–Protein interactions for RNA: ENST00000559566.5

SHF-205, Transcript of Src homology 2 domain containing F, humanhuman

TSL 1 (best)

Gene SHF, Length 884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-205ENST00000559566 LRRC27Q9C0I9 530 aa21.36■■□□□ 1.01
SHF-205ENST00000559566 UBN1Q9NPG3 1134 aa21.36■■□□□ 1.01
SHF-205ENST00000559566 CACNG4Q9UBN1 327 aa21.36■■□□□ 1.01
SHF-205ENST00000559566 EYSQ5T1H1 3165 aa21.36■■□□□ 1.01
SHF-205ENST00000559566 FAM189A1O60320 539 aa21.35■■□□□ 1.01
SHF-205ENST00000559566 FGF18O76093 207 aa21.35■■□□□ 1.01
SHF-205ENST00000559566 PRPF6O94906 941 aaKnown RBP21.35■■□□□ 1.01
SHF-205ENST00000559566 ZNF202O95125 648 aa21.35■■□□□ 1.01
SHF-205ENST00000559566 GALTP07902 379 aa21.35■■□□□ 1.01
SHF-205ENST00000559566 LIG4P49917 911 aa21.35■■□□□ 1.01
SHF-205ENST00000559566 SNW1Q13573 536 aaKnown RBP21.35■■□□□ 1.01
SHF-205ENST00000559566 NOLC1Q14978 699 aaKnown RBP eCLIP21.35■■□□□ 1.01
SHF-205ENST00000559566 KRBA2Q6ZNG9 492 aa21.35■■□□□ 1.01
SHF-205ENST00000559566 HACE1Q8IYU2 909 aa21.35■■□□□ 1.01
SHF-205ENST00000559566 SLC39A11Q8N1S5 342 aa21.35■■□□□ 1.01
SHF-205ENST00000559566 MICALL1Q8N3F8 863 aa21.35■■□□□ 1.01
SHF-205ENST00000559566 ENGASEQ8NFI3 743 aa21.35■■□□□ 1.01
SHF-205ENST00000559566 ZNF558Q96NG5 402 aa21.35■■□□□ 1.01
SHF-205ENST00000559566 IPO9Q96P70 1041 aaKnown RBP21.35■■□□□ 1.01
SHF-205ENST00000559566 TCHPQ9BT92 498 aa21.35■■□□□ 1.01
SHF-205ENST00000559566 USP25Q9UHP3 1055 aa21.35■■□□□ 1.01
SHF-205ENST00000559566 PCDHGC5Q9Y5F6 944 aa21.35■■□□□ 1.01
SHF-205ENST00000559566 TRANK1O15050 2925 aa21.34■■□□□ 1.01
SHF-205ENST00000559566 F8W810 466 aa21.34■■□□□ 1.01
SHF-205ENST00000559566 HNRNPDLO14979 420 aaKnown RBP21.34■■□□□ 1.01
SHF-205ENST00000559566 HOXD13P35453 343 aa21.34■■□□□ 1.01
SHF-205ENST00000559566 IRS1P35568 1242 aa21.34■■□□□ 1.01
SHF-205ENST00000559566 TNFSF9P41273 254 aa21.34■■□□□ 1.01
SHF-205ENST00000559566 RNASELQ05823 741 aaKnown RBP21.34■■□□□ 1.01
SHF-205ENST00000559566 DSC1Q08554 894 aa21.34■■□□□ 1.01
SHF-205ENST00000559566 NAB2Q15742 525 aa21.34■■□□□ 1.01
SHF-205ENST00000559566 L1TD1Q5T7N2 865 aaKnown RBP21.34■■□□□ 1.01
SHF-205ENST00000559566 COLGALT2Q8IYK4 626 aa21.34■■□□□ 1.01
SHF-205ENST00000559566 MAFAQ8NHW3 353 aaPredicted RBP21.34■■□□□ 1.01
SHF-205ENST00000559566 POF1BQ8WVV4 589 aa21.34■■□□□ 1.01
SHF-205ENST00000559566 PCDHB12Q9Y5F1 795 aa21.34■■□□□ 1.01
SHF-205ENST00000559566 CLDN3O15551 220 aa21.33■■□□□ 1.01
SHF-205ENST00000559566 SCP2P22307 547 aa21.33■■□□□ 1.01
SHF-205ENST00000559566 CCDC85BQ15834 202 aaPredicted RBP21.33■■□□□ 1.01
SHF-205ENST00000559566 GLRA4Q5JXX5 417 aa21.33■■□□□ 1.01
SHF-205ENST00000559566 FAM26FQ5R3K3 315 aa21.33■■□□□ 1.01
SHF-205ENST00000559566 EPM2AIP1Q7L775 607 aaPredicted RBP21.33■■□□□ 1.01
SHF-205ENST00000559566 TMEM130Q8N3G9 435 aa21.33■■□□□ 1.01
SHF-205ENST00000559566 SLC17A8Q8NDX2 589 aa21.33■■□□□ 1.01
SHF-205ENST00000559566 PPM1EQ8WY54 764 aa21.33■■□□□ 1.01
SHF-205ENST00000559566 RSPH1Q8WYR4 309 aa21.33■■□□□ 1.01
SHF-205ENST00000559566 RABGGTAQ92696 567 aa21.33■■□□□ 1.01
SHF-205ENST00000559566 HVCN1Q96D96 273 aa21.33■■□□□ 1.01
SHF-205ENST00000559566 MRPL38Q96DV4 380 aaKnown RBP21.33■■□□□ 1.01
SHF-205ENST00000559566 AAASQ9NRG9 546 aa21.33■■□□□ 1.01
SHF-205ENST00000559566 MARCH5Q9NX47 278 aa21.33■■□□□ 1.01
SHF-205ENST00000559566 ZMYM2Q9UBW7 1377 aa21.33■■□□□ 1
SHF-205ENST00000559566 COL6A3P12111 3177 aa21.32■■□□□ 1
SHF-205ENST00000559566 A0A0B4J269 797 aa21.32■■□□□ 1
SHF-205ENST00000559566 GTPBP6O43824 516 aaPredicted RBP21.32■■□□□ 1
SHF-205ENST00000559566 ADSSP30520 456 aa21.32■■□□□ 1
SHF-205ENST00000559566 KMT5BQ4FZB7 885 aa21.32■■□□□ 1
SHF-205ENST00000559566 XKR4Q5GH76 650 aa21.32■■□□□ 1
SHF-205ENST00000559566 ALKAL1Q6UXT8 129 aa21.32■■□□□ 1
SHF-205ENST00000559566 TMEM87AQ8NBN3 555 aa21.32■■□□□ 1
SHF-205ENST00000559566 ZSWIM2Q8NEG5 633 aa21.32■■□□□ 1
SHF-205ENST00000559566 SNX27Q96L92 541 aa21.32■■□□□ 1
SHF-205ENST00000559566 ZMAT2Q96NC0 199 aaKnown RBP21.32■■□□□ 1
SHF-205ENST00000559566 PAAF1Q9BRP4 392 aa21.32■■□□□ 1
SHF-205ENST00000559566 CCDC94Q9BW85 323 aaPredicted RBP21.32■■□□□ 1
SHF-205ENST00000559566 VN1R3Q9BXE9 311 aa21.32■■□□□ 1
SHF-205ENST00000559566 SPG21Q9NZD8 308 aa21.32■■□□□ 1
SHF-205ENST00000559566 KANSL3Q9P2N6 904 aa21.32■■□□□ 1
SHF-205ENST00000559566 STYXL1Q9Y6J8 313 aa21.32■■□□□ 1
SHF-205ENST00000559566 PVALEFA0A1B0GWK0 134 aa21.31■■□□□ 1
SHF-205ENST00000559566 NRP1O14786 923 aa21.31■■□□□ 1
SHF-205ENST00000559566 IGFBP6P24592 240 aaPredicted RBP21.31■■□□□ 1
SHF-205ENST00000559566 MATR3P43243 847 aaKnown RBP eCLIP21.31■■□□□ 1
SHF-205ENST00000559566 ERVFC1P60507 584 aa21.31■■□□□ 1
SHF-205ENST00000559566 PLCB3Q01970 1234 aa21.31■■□□□ 1
SHF-205ENST00000559566 DPYDQ12882 1025 aa21.31■■□□□ 1
SHF-205ENST00000559566 GRIK3Q13003 919 aa21.31■■□□□ 1
SHF-205ENST00000559566 SLC10A6Q3KNW5 377 aa21.31■■□□□ 1
SHF-205ENST00000559566 ACCSQ96QU6 501 aa21.31■■□□□ 1
SHF-205ENST00000559566 RPS6KC1Q96S38 1066 aa21.31■■□□□ 1
SHF-205ENST00000559566 SLC39A2Q9NP94 309 aa21.31■■□□□ 1
SHF-205ENST00000559566 PRDM6Q9NQX0 595 aa21.31■■□□□ 1
SHF-205ENST00000559566 PRG3Q9Y2Y8 225 aaPredicted RBP21.31■■□□□ 1
SHF-205ENST00000559566 PCDHB13Q9Y5F0 798 aa21.31■■□□□ 1
SHF-205ENST00000559566 PLXNA4Q9HCM2 1894 aa21.3■■□□□ 1
SHF-205ENST00000559566 REV3LO60673 3130 aa21.3■■□□□ 1
SHF-205ENST00000559566 GOLGA6L4A6NEF3 574 aa21.3■■□□□ 1
SHF-205ENST00000559566 NR1I2O75469 434 aa21.3■■□□□ 1
SHF-205ENST00000559566 CXCL8P10145 99 aa21.3■■□□□ 1
SHF-205ENST00000559566 APBB1IPQ7Z5R6 666 aaPredicted RBP21.3■■□□□ 1
SHF-205ENST00000559566 KIAA0895Q8NCT3 520 aa21.3■■□□□ 1
SHF-205ENST00000559566 SCFD1Q8WVM8 642 aa21.3■■□□□ 1
SHF-205ENST00000559566 IGSF21Q96ID5 467 aa21.3■■□□□ 1
SHF-205ENST00000559566 ACAP3Q96P50 834 aa21.3■■□□□ 1
SHF-205ENST00000559566 PPP1R10Q96QC0 940 aaKnown RBP21.3■■□□□ 1
SHF-205ENST00000559566 TMEM175Q9BSA9 504 aa21.3■■□□□ 1
SHF-205ENST00000559566 LMAN2LQ9H0V9 348 aa21.3■■□□□ 1
SHF-205ENST00000559566 LMCD1Q9NZU5 365 aa21.3■■□□□ 1
SHF-205ENST00000559566 SMIM28A0A1B0GU29 152 aa21.29■■□□□ 1
SHF-205ENST00000559566 CASTOR2A6NHX0 329 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms