RNA–Protein interactions for RNA: ENST00000559550.1

CASC4-210, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-210ENST00000559550 DPF2Q92785 391 aa4.47□□□□□ -1.69
CASC4-210ENST00000559550 EXTL1Q92935 676 aa4.47□□□□□ -1.69
CASC4-210ENST00000559550 MIEF2Q96C03 454 aa4.47□□□□□ -1.69
CASC4-210ENST00000559550 PAWRQ96IZ0 340 aaKnown RBP4.47□□□□□ -1.69
CASC4-210ENST00000559550 DNM3Q9UQ16 869 aa4.47□□□□□ -1.69
CASC4-210ENST00000559550 SIK3Q9Y2K2 1263 aa4.47□□□□□ -1.69
CASC4-210ENST00000559550 KLHL33A6NCF5 533 aa4.46□□□□□ -1.7
CASC4-210ENST00000559550 PHF2O75151 1096 aa4.46□□□□□ -1.7
CASC4-210ENST00000559550 GASTP01350 101 aa4.46□□□□□ -1.7
CASC4-210ENST00000559550 HK1P19367 917 aa4.46□□□□□ -1.7
CASC4-210ENST00000559550 LMO1P25800 156 aa4.46□□□□□ -1.7
CASC4-210ENST00000559550 ECHS1P30084 290 aa4.46□□□□□ -1.7
CASC4-210ENST00000559550 SREBF1P36956 1147 aa4.46□□□□□ -1.7
CASC4-210ENST00000559550 SLC6A9P48067 706 aa4.46□□□□□ -1.7
CASC4-210ENST00000559550 PTTG1IPP53801 180 aa4.46□□□□□ -1.7
CASC4-210ENST00000559550 IGBP1P78318 339 aa4.46□□□□□ -1.7
CASC4-210ENST00000559550 APBA1Q02410 837 aa4.46□□□□□ -1.7
CASC4-210ENST00000559550 LSM12Q3MHD2 195 aaKnown RBP4.46□□□□□ -1.7
CASC4-210ENST00000559550 MFSD5Q6N075 450 aa4.46□□□□□ -1.7
CASC4-210ENST00000559550 DPY19L2P1Q6NXN4 242 aa4.46□□□□□ -1.7
CASC4-210ENST00000559550 ANKRD35Q8N283 1001 aa4.46□□□□□ -1.7
CASC4-210ENST00000559550 MDGA1Q8NFP4 955 aa4.46□□□□□ -1.7
CASC4-210ENST00000559550 IL17DQ8TAD2 202 aa4.46□□□□□ -1.7
CASC4-210ENST00000559550 NRG4Q8WWG1 115 aa4.46□□□□□ -1.7
CASC4-210ENST00000559550 ST8SIA2Q92186 375 aa4.46□□□□□ -1.7
CASC4-210ENST00000559550 ZG16BQ96DA0 208 aa4.46□□□□□ -1.7
CASC4-210ENST00000559550 PGBD4Q96DM1 585 aa4.46□□□□□ -1.7
CASC4-210ENST00000559550 TEKT5Q96M29 485 aa4.46□□□□□ -1.7
CASC4-210ENST00000559550 CRAMP1Q96RY5 1269 aa4.46□□□□□ -1.7
CASC4-210ENST00000559550 CDC5LQ99459 802 aaKnown RBP4.46□□□□□ -1.7
CASC4-210ENST00000559550 AGAP2Q99490 1192 aa4.46□□□□□ -1.7
CASC4-210ENST00000559550 ADI1Q9BV57 179 aa4.46□□□□□ -1.7
CASC4-210ENST00000559550 EPC1Q9H2F5 836 aa4.46□□□□□ -1.7
CASC4-210ENST00000559550 LDAHQ9H6V9 325 aa4.46□□□□□ -1.7
CASC4-210ENST00000559550 DDX56Q9NY93 547 aaKnown RBP4.46□□□□□ -1.7
CASC4-210ENST00000559550 ATRNL1Q5VV63 1379 aa4.45□□□□□ -1.7
CASC4-210ENST00000559550 KLRG2A4D1S0 409 aaPredicted RBP4.45□□□□□ -1.7
CASC4-210ENST00000559550 GNAT2P19087 354 aa4.45□□□□□ -1.7
CASC4-210ENST00000559550 ACRV1P26436 265 aa4.45□□□□□ -1.7
CASC4-210ENST00000559550 CRHR1P34998 444 aa4.45□□□□□ -1.7
CASC4-210ENST00000559550 PTPN7P35236 360 aa4.45□□□□□ -1.7
CASC4-210ENST00000559550 KRT85P78386 507 aa4.45□□□□□ -1.7
CASC4-210ENST00000559550 MGAT2Q10469 447 aa4.45□□□□□ -1.7
CASC4-210ENST00000559550 RRP1BQ14684 758 aaKnown RBP4.45□□□□□ -1.7
CASC4-210ENST00000559550 APBB1IPQ7Z5R6 666 aaPredicted RBP4.45□□□□□ -1.7
CASC4-210ENST00000559550 PNMA8AQ86V59 439 aaPredicted RBP4.45□□□□□ -1.7
CASC4-210ENST00000559550 PQLC1Q8N2U9 271 aa4.45□□□□□ -1.7
CASC4-210ENST00000559550 OR7D4Q8NG98 312 aa4.45□□□□□ -1.7
CASC4-210ENST00000559550 SLC35B2Q8TB61 432 aa4.45□□□□□ -1.7
CASC4-210ENST00000559550 ATXN2LQ8WWM7 1075 aaKnown RBP4.45□□□□□ -1.7
CASC4-210ENST00000559550 STON2Q8WXE9 905 aa4.45□□□□□ -1.7
CASC4-210ENST00000559550 CPPED1Q9BRF8 314 aaPredicted RBP4.45□□□□□ -1.7
CASC4-210ENST00000559550 PDCD2LQ9BRP1 358 aa4.45□□□□□ -1.7
CASC4-210ENST00000559550 SLC13A1Q9BZW2 595 aa4.45□□□□□ -1.7
CASC4-210ENST00000559550 KCNH6Q9H252 994 aa4.45□□□□□ -1.7
CASC4-210ENST00000559550 BCO1Q9HAY6 547 aa4.45□□□□□ -1.7
CASC4-210ENST00000559550 SERPINB13Q9UIV8 391 aa4.45□□□□□ -1.7
CASC4-210ENST00000559550 INTUQ9ULD6 942 aa4.45□□□□□ -1.7
CASC4-210ENST00000559550 ZBTB21Q9ULJ3 1066 aa4.45□□□□□ -1.7
CASC4-210ENST00000559550 GIT1Q9Y2X7 761 aa4.45□□□□□ -1.7
CASC4-210ENST00000559550 KRTAP23-1A1A580 65 aa4.44□□□□□ -1.7
CASC4-210ENST00000559550 MFAP3LO75121 409 aa4.44□□□□□ -1.7
CASC4-210ENST00000559550 PPFIA2O75334 1257 aa4.44□□□□□ -1.7
CASC4-210ENST00000559550 IPO13O94829 963 aaKnown RBP4.44□□□□□ -1.7
CASC4-210ENST00000559550 ZRANB2O95218 330 aaKnown RBP eCLIP4.44□□□□□ -1.7
CASC4-210ENST00000559550 AMY1AP04745 511 aa4.44□□□□□ -1.7
CASC4-210ENST00000559550 PDGFRBP09619 1106 aa4.44□□□□□ -1.7
CASC4-210ENST00000559550 ALOX15P16050 662 aaPredicted RBP4.44□□□□□ -1.7
CASC4-210ENST00000559550 NCLP19338 710 aaKnown RBP4.44□□□□□ -1.7
CASC4-210ENST00000559550 FPR1P21462 350 aa4.44□□□□□ -1.7
CASC4-210ENST00000559550 EDNRBP24530 442 aa4.44□□□□□ -1.7
CASC4-210ENST00000559550 GUCY1A2P33402 732 aa4.44□□□□□ -1.7
CASC4-210ENST00000559550 EXOSC10Q01780 885 aaKnown RBP4.44□□□□□ -1.7
CASC4-210ENST00000559550 HTR3DQ70Z44 454 aa4.44□□□□□ -1.7
CASC4-210ENST00000559550 GPRIN1Q7Z2K8 1008 aa4.44□□□□□ -1.7
CASC4-210ENST00000559550 ZNF572Q7Z3I7 529 aaPredicted RBP4.44□□□□□ -1.7
CASC4-210ENST00000559550 C1orf210Q8IVY1 113 aa4.44□□□□□ -1.7
CASC4-210ENST00000559550 GSPT2Q8IYD1 628 aaKnown RBP4.44□□□□□ -1.7
CASC4-210ENST00000559550 THEMISQ8N1K5 641 aaPredicted RBP4.44□□□□□ -1.7
CASC4-210ENST00000559550 ZGPATQ8N5A5 531 aaKnown RBP4.44□□□□□ -1.7
CASC4-210ENST00000559550 OR52N2Q8NGI0 321 aa4.44□□□□□ -1.7
CASC4-210ENST00000559550 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.44□□□□□ -1.7
CASC4-210ENST00000559550 NEU4Q8WWR8 484 aaPredicted RBP4.44□□□□□ -1.7
CASC4-210ENST00000559550 SSH1Q8WYL5 1049 aa4.44□□□□□ -1.7
CASC4-210ENST00000559550 RAB24Q969Q5 203 aa4.44□□□□□ -1.7
CASC4-210ENST00000559550 MNTQ99583 582 aa4.44□□□□□ -1.7
CASC4-210ENST00000559550 GPR87Q9BY21 358 aa4.44□□□□□ -1.7
CASC4-210ENST00000559550 CEP72Q9P209 647 aa4.44□□□□□ -1.7
CASC4-210ENST00000559550 LIMCH1Q9UPQ0 1083 aa4.44□□□□□ -1.7
CASC4-210ENST00000559550 GRXCR1A8MXD5 290 aa4.43□□□□□ -1.7
CASC4-210ENST00000559550 CYP27B1O15528 508 aa4.43□□□□□ -1.7
CASC4-210ENST00000559550 C1SP09871 688 aa4.43□□□□□ -1.7
CASC4-210ENST00000559550 PCSK1P29120 753 aa4.43□□□□□ -1.7
CASC4-210ENST00000559550 WASP42768 502 aa4.43□□□□□ -1.7
CASC4-210ENST00000559550 MAN2A2P49641 1150 aa4.43□□□□□ -1.7
CASC4-210ENST00000559550 PER3P56645 1201 aa4.43□□□□□ -1.7
CASC4-210ENST00000559550 KRTAP10-11P60412 298 aa4.43□□□□□ -1.7
CASC4-210ENST00000559550 KIF23Q02241 960 aaPredicted RBP4.43□□□□□ -1.7
CASC4-210ENST00000559550 CRHR2Q13324 411 aa4.43□□□□□ -1.7
CASC4-210ENST00000559550 C3orf36Q3SXR2 165 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms