RNA–Protein interactions for RNA: ENST00000559485.2

RGPD1-204, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD1, Length 5,247 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-204ENST00000559485 NOVA2Q9UNW9 492 aaKnown RBP2.53□□□□□ -2
RGPD1-204ENST00000559485 HPS5Q9UPZ3 1129 aa2.53□□□□□ -2
RGPD1-204ENST00000559485 RWDD3Q9Y3V2 267 aa2.53□□□□□ -2
RGPD1-204ENST00000559485 LRRC42Q9Y546 428 aa2.53□□□□□ -2
RGPD1-204ENST00000559485 PFASO15067 1338 aa2.53□□□□□ -2
RGPD1-204ENST00000559485 MROH5Q6ZUA9 1318 aa2.53□□□□□ -2
RGPD1-204ENST00000559485 SYNGAP1Q96PV0 1343 aa2.53□□□□□ -2
RGPD1-204ENST00000559485 GOLGA8IPA6NC78 632 aa2.53□□□□□ -2.01
RGPD1-204ENST00000559485 MIF4GDA9UHW6 222 aaKnown RBP2.53□□□□□ -2.01
RGPD1-204ENST00000559485 F8W8V4 182 aa2.53□□□□□ -2.01
RGPD1-204ENST00000559485 GIPC1O14908 333 aa2.53□□□□□ -2.01
RGPD1-204ENST00000559485 TEX28O15482 410 aa2.53□□□□□ -2.01
RGPD1-204ENST00000559485 THAP12O43422 761 aa2.53□□□□□ -2.01
RGPD1-204ENST00000559485 PRLP01236 227 aa2.53□□□□□ -2.01
RGPD1-204ENST00000559485 VAV1P15498 845 aa2.53□□□□□ -2.01
RGPD1-204ENST00000559485 KIF11P52732 1056 aa2.53□□□□□ -2.01
RGPD1-204ENST00000559485 OXCT1P55809 520 aa2.53□□□□□ -2.01
RGPD1-204ENST00000559485 GEMIN4P57678 1058 aaKnown RBP2.53□□□□□ -2.01
RGPD1-204ENST00000559485 GUCY2DQ02846 1103 aa2.53□□□□□ -2.01
RGPD1-204ENST00000559485 FLOT2Q14254 428 aa2.53□□□□□ -2.01
RGPD1-204ENST00000559485 LPIN1Q14693 890 aa2.53□□□□□ -2.01
RGPD1-204ENST00000559485 SNX17Q15036 470 aa2.53□□□□□ -2.01
RGPD1-204ENST00000559485 PTPAQ15257 358 aa2.53□□□□□ -2.01
RGPD1-204ENST00000559485 CNPY1Q3B7I2 92 aa2.53□□□□□ -2.01
RGPD1-204ENST00000559485 MMEL1Q495T6 779 aa2.53□□□□□ -2.01
RGPD1-204ENST00000559485 PPP1R15BQ5SWA1 713 aa2.53□□□□□ -2.01
RGPD1-204ENST00000559485 IL23RQ5VWK5 629 aa2.53□□□□□ -2.01
RGPD1-204ENST00000559485 C16orf89Q6UX73 402 aa2.53□□□□□ -2.01
RGPD1-204ENST00000559485 RAD9BQ6WBX8 426 aa2.53□□□□□ -2.01
RGPD1-204ENST00000559485 LRRC74BQ6ZQY2 392 aa2.53□□□□□ -2.01
RGPD1-204ENST00000559485 SV2BQ7L1I2 683 aa2.53□□□□□ -2.01
RGPD1-204ENST00000559485 CYFIP1Q7L576 1253 aa2.53□□□□□ -2.01
RGPD1-204ENST00000559485 TLK2Q86UE8 772 aa2.53□□□□□ -2.01
RGPD1-204ENST00000559485 ZNF598Q86UK7 904 aaKnown RBP2.53□□□□□ -2.01
RGPD1-204ENST00000559485 TCAIMQ8N3R3 496 aa2.53□□□□□ -2.01
RGPD1-204ENST00000559485 GALNT6Q8NCL4 622 aa2.53□□□□□ -2.01
RGPD1-204ENST00000559485 SPATA20Q8TB22 786 aa2.53□□□□□ -2.01
RGPD1-204ENST00000559485 ACTRT1Q8TDG2 376 aa2.53□□□□□ -2.01
RGPD1-204ENST00000559485 ALKBH8Q96BT7 664 aaKnown RBP2.53□□□□□ -2.01
RGPD1-204ENST00000559485 THAP11Q96EK4 314 aa2.53□□□□□ -2.01
RGPD1-204ENST00000559485 NSL1Q96IY1 281 aa2.53□□□□□ -2.01
RGPD1-204ENST00000559485 B3GALT6Q96L58 329 aa2.53□□□□□ -2.01
RGPD1-204ENST00000559485 BTBD9Q96Q07 612 aa2.53□□□□□ -2.01
RGPD1-204ENST00000559485 PURBQ96QR8 312 aaKnown RBP2.53□□□□□ -2.01
RGPD1-204ENST00000559485 MXD3Q9BW11 206 aa2.53□□□□□ -2.01
RGPD1-204ENST00000559485 FTOQ9C0B1 505 aaKnown RBP eCLIP2.53□□□□□ -2.01
RGPD1-204ENST00000559485 LRMDAQ9H2I8 198 aa2.53□□□□□ -2.01
RGPD1-204ENST00000559485 EPS8L2Q9H6S3 715 aa2.53□□□□□ -2.01
RGPD1-204ENST00000559485 METTL5Q9NRN9 209 aaKnown RBP2.53□□□□□ -2.01
RGPD1-204ENST00000559485 LMCD1Q9NZU5 365 aa2.53□□□□□ -2.01
RGPD1-204ENST00000559485 APPL1Q9UKG1 709 aa2.53□□□□□ -2.01
RGPD1-204ENST00000559485 AMFRQ9UKV5 643 aa2.53□□□□□ -2.01
RGPD1-204ENST00000559485 SORCS3Q9UPU3 1222 aa2.53□□□□□ -2.01
RGPD1-204ENST00000559485 ACTL7BQ9Y614 415 aa2.53□□□□□ -2.01
RGPD1-204ENST00000559485 NOTOA8MTQ0 251 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 FARP2O94887 1054 aaPredicted RBP2.52□□□□□ -2.01
RGPD1-204ENST00000559485 GYPCP04921 128 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 ATP1A1P05023 1023 aaKnown RBP2.52□□□□□ -2.01
RGPD1-204ENST00000559485 FAM58BPP0C7Q3 252 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 FAM228BP0C875 321 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 KRT15P19012 456 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 GNA11P29992 359 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 HNRNPH3P31942 346 aaKnown RBP2.52□□□□□ -2.01
RGPD1-204ENST00000559485 HOXD12P35452 270 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 KRT20P35900 424 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 VPS41P49754 854 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 POLGP54098 1239 aaPredicted RBP2.52□□□□□ -2.01
RGPD1-204ENST00000559485 RAB25P57735 213 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 PDE4BQ07343 736 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 MCL1Q07820 350 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 IFIT5Q13325 482 aaKnown RBP2.52□□□□□ -2.01
RGPD1-204ENST00000559485 IRF5Q13568 498 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 MYBPC3Q14896 1274 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 SLC9C2Q5TAH2 1124 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 TTC27Q6P3X3 843 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 C1orf228Q6PIY5 440 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 APOA5Q6Q788 366 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 EXOC3L1Q86VI1 746 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 RASSF3Q86WH2 238 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 ERI1Q8IV48 349 aaKnown RBP2.52□□□□□ -2.01
RGPD1-204ENST00000559485 RIN3Q8TB24 985 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 PLEKHO2Q8TD55 490 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 PPP4R1Q8TF05 950 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 RAPGEF5Q92565 580 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 KAT2BQ92831 832 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 SH3KBP1Q96B97 665 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 SGF29Q96ES7 293 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 PGM2Q96G03 612 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 SNX27Q96L92 541 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 MMS19Q96T76 1030 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 ELAC2Q9BQ52 826 aaKnown RBP2.52□□□□□ -2.01
RGPD1-204ENST00000559485 CORO1BQ9BR76 489 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 TUBGCP2Q9BSJ2 902 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP2.52□□□□□ -2.01
RGPD1-204ENST00000559485 OSBPL8Q9BZF1 889 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 NT5C3AQ9H0P0 336 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 TMEM168Q9H0V1 697 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 TMEM165Q9HC07 324 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 EPB41L5Q9HCM4 733 aa2.52□□□□□ -2.01
RGPD1-204ENST00000559485 HOMER2Q9NSB8 354 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms