RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 CEP120Q8N960 986 aa8.99□□□□□ -0.97
SNX1-207ENST00000559401 MRPL43Q8N983 215 aaKnown RBP8.99□□□□□ -0.97
SNX1-207ENST00000559401 KRI1Q8N9T8 703 aaKnown RBP8.99□□□□□ -0.97
SNX1-207ENST00000559401 VN1R2Q8NFZ6 395 aa8.99□□□□□ -0.97
SNX1-207ENST00000559401 HASPINQ8TF76 798 aa8.99□□□□□ -0.97
SNX1-207ENST00000559401 SPIRE2Q8WWL2 714 aa8.99□□□□□ -0.97
SNX1-207ENST00000559401 CASP10Q92851 521 aa8.99□□□□□ -0.97
SNX1-207ENST00000559401 ACO2Q99798 780 aaKnown RBP8.99□□□□□ -0.97
SNX1-207ENST00000559401 EMILIN2Q9BXX0 1053 aa8.99□□□□□ -0.97
SNX1-207ENST00000559401 CCSER1Q9C0I3 900 aa8.99□□□□□ -0.97
SNX1-207ENST00000559401 CDT1Q9H211 546 aa8.99□□□□□ -0.97
SNX1-207ENST00000559401 MRPL17Q9NRX2 175 aaKnown RBP8.99□□□□□ -0.97
SNX1-207ENST00000559401 TOPORSQ9NS56 1045 aaPredicted RBP8.99□□□□□ -0.97
SNX1-207ENST00000559401 BLOC1S4Q9NUP1 217 aa8.99□□□□□ -0.97
SNX1-207ENST00000559401 MARCH5Q9NX47 278 aa8.99□□□□□ -0.97
SNX1-207ENST00000559401 CLEC1BQ9P126 229 aa8.99□□□□□ -0.97
SNX1-207ENST00000559401 ARHGAP28Q9P2N2 729 aa8.99□□□□□ -0.97
SNX1-207ENST00000559401 TFIP11Q9UBB9 837 aaKnown RBP8.99□□□□□ -0.97
SNX1-207ENST00000559401 CACNG4Q9UBN1 327 aa8.99□□□□□ -0.97
SNX1-207ENST00000559401 DAXXQ9UER7 740 aaPredicted RBP8.99□□□□□ -0.97
SNX1-207ENST00000559401 STK39Q9UEW8 545 aa8.99□□□□□ -0.97
SNX1-207ENST00000559401 ODF2LQ9ULJ1 636 aa8.99□□□□□ -0.97
SNX1-207ENST00000559401 TNFSF13BQ9Y275 285 aa8.99□□□□□ -0.97
SNX1-207ENST00000559401 SRPRBQ9Y5M8 271 aaKnown RBP8.99□□□□□ -0.97
SNX1-207ENST00000559401 HCFC2Q9Y5Z7 792 aa8.99□□□□□ -0.97
SNX1-207ENST00000559401 TTC28Q96AY4 2481 aa8.99□□□□□ -0.97
SNX1-207ENST00000559401 F8W810 466 aa8.98□□□□□ -0.97
SNX1-207ENST00000559401 PTGESO14684 152 aa8.98□□□□□ -0.97
SNX1-207ENST00000559401 SPTLC2O15270 562 aa8.98□□□□□ -0.97
SNX1-207ENST00000559401 CLASP2O75122 1294 aaKnown RBP8.98□□□□□ -0.97
SNX1-207ENST00000559401 TADA2AO75478 443 aa8.98□□□□□ -0.97
SNX1-207ENST00000559401 SOD2P04179 222 aa8.98□□□□□ -0.97
SNX1-207ENST00000559401 ZSCAN22P10073 491 aaPredicted RBP8.98□□□□□ -0.97
SNX1-207ENST00000559401 KLRC2P26717 231 aa8.98□□□□□ -0.97
SNX1-207ENST00000559401 STAT6P42226 847 aa8.98□□□□□ -0.97
SNX1-207ENST00000559401 GLUD2P49448 558 aa8.98□□□□□ -0.97
SNX1-207ENST00000559401 COASYQ13057 564 aa8.98□□□□□ -0.97
SNX1-207ENST00000559401 TUSC3Q13454 348 aa8.98□□□□□ -0.97
SNX1-207ENST00000559401 HSP90AA2PQ14568 343 aaPredicted RBP8.98□□□□□ -0.97
SNX1-207ENST00000559401 NOLC1Q14978 699 aaKnown RBP eCLIP8.98□□□□□ -0.97
SNX1-207ENST00000559401 SLC39A14Q15043 492 aa8.98□□□□□ -0.97
SNX1-207ENST00000559401 PTPN14Q15678 1187 aa8.98□□□□□ -0.97
SNX1-207ENST00000559401 SMAD2Q15796 467 aaKnown RBP8.98□□□□□ -0.97
SNX1-207ENST00000559401 ANKRD54Q6NXT1 300 aa8.98□□□□□ -0.97
SNX1-207ENST00000559401 FUT10Q6P4F1 479 aa8.98□□□□□ -0.97
SNX1-207ENST00000559401 MPZL3Q6UWV2 235 aa8.98□□□□□ -0.97
SNX1-207ENST00000559401 DYMQ7RTS9 669 aa8.98□□□□□ -0.97
SNX1-207ENST00000559401 TAS1R3Q7RTX0 852 aa8.98□□□□□ -0.97
SNX1-207ENST00000559401 HAUS6Q7Z4H7 955 aa8.98□□□□□ -0.97
SNX1-207ENST00000559401 GJD3Q8N144 294 aa8.98□□□□□ -0.97
SNX1-207ENST00000559401 PDILTQ8N807 584 aa8.98□□□□□ -0.97
SNX1-207ENST00000559401 TMEM161BQ8NDZ6 487 aa8.98□□□□□ -0.97
SNX1-207ENST00000559401 GSTCDQ8NEC7 633 aa8.98□□□□□ -0.97
SNX1-207ENST00000559401 LRRC15Q8TF66 581 aa8.98□□□□□ -0.97
SNX1-207ENST00000559401 MSLNLQ96KJ4 702 aa8.98□□□□□ -0.97
SNX1-207ENST00000559401 POP1Q99575 1024 aaKnown RBP8.98□□□□□ -0.97
SNX1-207ENST00000559401 HERC2P3Q9BVR0 1158 aa8.98□□□□□ -0.97
SNX1-207ENST00000559401 VN1R3Q9BXE9 311 aa8.98□□□□□ -0.97
SNX1-207ENST00000559401 PANK2Q9BZ23 570 aa8.98□□□□□ -0.97
SNX1-207ENST00000559401 PARVGQ9HBI0 331 aa8.98□□□□□ -0.97
SNX1-207ENST00000559401 STK17AQ9UEE5 414 aa8.98□□□□□ -0.97
SNX1-207ENST00000559401 ADAM28Q9UKQ2 775 aa8.98□□□□□ -0.97
SNX1-207ENST00000559401 USP15Q9Y4E8 981 aaPredicted RBP8.98□□□□□ -0.97
SNX1-207ENST00000559401 HNRNPDLO14979 420 aaKnown RBP8.97□□□□□ -0.97
SNX1-207ENST00000559401 CLDN3O15551 220 aa8.97□□□□□ -0.97
SNX1-207ENST00000559401 TRAK2O60296 914 aa8.97□□□□□ -0.97
SNX1-207ENST00000559401 TOM1L1O75674 476 aa8.97□□□□□ -0.97
SNX1-207ENST00000559401 F13A1P00488 732 aa8.97□□□□□ -0.97
SNX1-207ENST00000559401 MAPTP10636 758 aaKnown RBP8.97□□□□□ -0.97
SNX1-207ENST00000559401 MCF2P10911 925 aa8.97□□□□□ -0.97
SNX1-207ENST00000559401 PDIA4P13667 645 aaKnown RBP8.97□□□□□ -0.97
SNX1-207ENST00000559401 IDEP14735 1019 aa8.97□□□□□ -0.97
SNX1-207ENST00000559401 EPCAMP16422 314 aa8.97□□□□□ -0.97
SNX1-207ENST00000559401 DDIT3P35638 169 aa8.97□□□□□ -0.97
SNX1-207ENST00000559401 GRM5P41594 1212 aa8.97□□□□□ -0.97
SNX1-207ENST00000559401 NASPP49321 788 aaPredicted RBP8.97□□□□□ -0.97
SNX1-207ENST00000559401 LIG4P49917 911 aa8.97□□□□□ -0.97
SNX1-207ENST00000559401 NCKAP1LP55160 1127 aa8.97□□□□□ -0.97
SNX1-207ENST00000559401 TPRNQ4KMQ1 711 aa8.97□□□□□ -0.97
SNX1-207ENST00000559401 SEZ6Q53EL9 994 aa8.97□□□□□ -0.97
SNX1-207ENST00000559401 RARS2Q5T160 578 aaKnown RBP8.97□□□□□ -0.97
SNX1-207ENST00000559401 CES5AQ6NT32 575 aa8.97□□□□□ -0.97
SNX1-207ENST00000559401 CCDC73Q6ZRK6 1079 aa8.97□□□□□ -0.97
SNX1-207ENST00000559401 SV2BQ7L1I2 683 aa8.97□□□□□ -0.97
SNX1-207ENST00000559401 CEP57Q86XR8 500 aa8.97□□□□□ -0.97
SNX1-207ENST00000559401 GLYCTKQ8IVS8 523 aa8.97□□□□□ -0.97
SNX1-207ENST00000559401 ADHFE1Q8IWW8 467 aa8.97□□□□□ -0.97
SNX1-207ENST00000559401 SMRP1Q8NCR6 262 aa8.97□□□□□ -0.97
SNX1-207ENST00000559401 ZBTB45Q96K62 511 aaPredicted RBP8.97□□□□□ -0.97
SNX1-207ENST00000559401 B3GALT6Q96L58 329 aa8.97□□□□□ -0.97
SNX1-207ENST00000559401 ACAP3Q96P50 834 aa8.97□□□□□ -0.97
SNX1-207ENST00000559401 PAAF1Q9BRP4 392 aa8.97□□□□□ -0.97
SNX1-207ENST00000559401 NTPCRQ9BSD7 190 aaKnown RBP8.97□□□□□ -0.97
SNX1-207ENST00000559401 CXCL16Q9H2A7 254 aa8.97□□□□□ -0.97
SNX1-207ENST00000559401 DZANK1Q9NVP4 752 aa8.97□□□□□ -0.97
SNX1-207ENST00000559401 PRKAG3Q9UGI9 489 aa8.97□□□□□ -0.97
SNX1-207ENST00000559401 SSX2IPQ9Y2D8 614 aa8.97□□□□□ -0.97
SNX1-207ENST00000559401 PLXNA3P51805 1871 aa8.97□□□□□ -0.97
SNX1-207ENST00000559401 SF3B1O75533 1304 aaKnown RBP eCLIP8.97□□□□□ -0.97
SNX1-207ENST00000559401 PDCD11Q14690 1871 aaKnown RBP8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms