RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 KRT85P78386 507 aa4.79□□□□□ -1.64
SNX1-205ENST00000559339 CREMQ03060 361 aa4.79□□□□□ -1.64
SNX1-205ENST00000559339 GRIN1Q05586 938 aa4.79□□□□□ -1.64
SNX1-205ENST00000559339 HYAL1Q12794 435 aa4.79□□□□□ -1.64
SNX1-205ENST00000559339 MAPK7Q13164 816 aa4.79□□□□□ -1.64
SNX1-205ENST00000559339 TUSC3Q13454 348 aa4.79□□□□□ -1.64
SNX1-205ENST00000559339 CAMK1Q14012 370 aa4.79□□□□□ -1.64
SNX1-205ENST00000559339 NOLC1Q14978 699 aaKnown RBP eCLIP4.79□□□□□ -1.64
SNX1-205ENST00000559339 FOXD4L6Q3SYB3 417 aaPredicted RBP4.79□□□□□ -1.64
SNX1-205ENST00000559339 TPRNQ4KMQ1 711 aa4.79□□□□□ -1.64
SNX1-205ENST00000559339 ARSHQ5FYA8 562 aa4.79□□□□□ -1.64
SNX1-205ENST00000559339 SLFN12LQ6IEE8 588 aa4.79□□□□□ -1.64
SNX1-205ENST00000559339 PTCRAQ6ISU1 281 aaPredicted RBP4.79□□□□□ -1.64
SNX1-205ENST00000559339 MPZL3Q6UWV2 235 aa4.79□□□□□ -1.64
SNX1-205ENST00000559339 FOXD4L3Q6VB84 417 aaPredicted RBP4.79□□□□□ -1.64
SNX1-205ENST00000559339 ZPBP2Q6X784 338 aa4.79□□□□□ -1.64
SNX1-205ENST00000559339 STXBP4Q6ZWJ1 553 aa4.79□□□□□ -1.64
SNX1-205ENST00000559339 HAUS6Q7Z4H7 955 aa4.79□□□□□ -1.64
SNX1-205ENST00000559339 PPFIBP1Q86W92 1011 aa4.79□□□□□ -1.64
SNX1-205ENST00000559339 CDR2LQ86X02 465 aaPredicted RBP4.79□□□□□ -1.64
SNX1-205ENST00000559339 ZNF280BQ86YH2 543 aa4.79□□□□□ -1.64
SNX1-205ENST00000559339 COLGALT2Q8IYK4 626 aa4.79□□□□□ -1.64
SNX1-205ENST00000559339 HS6ST3Q8IZP7 471 aa4.79□□□□□ -1.64
SNX1-205ENST00000559339 DAW1Q8N136 415 aa4.79□□□□□ -1.64
SNX1-205ENST00000559339 EFHBQ8N7U6 833 aa4.79□□□□□ -1.64
SNX1-205ENST00000559339 IQUBQ8NA54 791 aa4.79□□□□□ -1.64
SNX1-205ENST00000559339 TMEM161BQ8NDZ6 487 aa4.79□□□□□ -1.64
SNX1-205ENST00000559339 ADAMTS19Q8TE59 1207 aa4.79□□□□□ -1.64
SNX1-205ENST00000559339 DDX12PQ92771 950 aa4.79□□□□□ -1.64
SNX1-205ENST00000559339 CCDC34Q96HJ3 373 aa4.79□□□□□ -1.64
SNX1-205ENST00000559339 ACAP3Q96P50 834 aa4.79□□□□□ -1.64
SNX1-205ENST00000559339 POP1Q99575 1024 aaKnown RBP4.79□□□□□ -1.64
SNX1-205ENST00000559339 ACO2Q99798 780 aaKnown RBP4.79□□□□□ -1.64
SNX1-205ENST00000559339 TARS2Q9BW92 718 aaKnown RBP4.79□□□□□ -1.64
SNX1-205ENST00000559339 COL25A1Q9BXS0 654 aaPredicted RBP4.79□□□□□ -1.64
SNX1-205ENST00000559339 SCAND2PQ9GZW5 306 aaPredicted RBP4.79□□□□□ -1.64
SNX1-205ENST00000559339 CUEDC2Q9H467 287 aa4.79□□□□□ -1.64
SNX1-205ENST00000559339 MRPL44Q9H9J2 332 aaKnown RBP4.79□□□□□ -1.64
SNX1-205ENST00000559339 BLOC1S4Q9NUP1 217 aa4.79□□□□□ -1.64
SNX1-205ENST00000559339 SNTG2Q9NY99 539 aa4.79□□□□□ -1.64
SNX1-205ENST00000559339 KLK14Q9P0G3 267 aa4.79□□□□□ -1.64
SNX1-205ENST00000559339 HCSTQ9UBK5 93 aa4.79□□□□□ -1.64
SNX1-205ENST00000559339 SEL1LQ9UBV2 794 aa4.79□□□□□ -1.64
SNX1-205ENST00000559339 DNAJB4Q9UDY4 337 aa4.79□□□□□ -1.64
SNX1-205ENST00000559339 TBX20Q9UMR3 447 aa4.79□□□□□ -1.64
SNX1-205ENST00000559339 EXOC7Q9UPT5 735 aa4.79□□□□□ -1.64
SNX1-205ENST00000559339 GDAQ9Y2T3 454 aa4.79□□□□□ -1.64
SNX1-205ENST00000559339 PRG3Q9Y2Y8 225 aaPredicted RBP4.79□□□□□ -1.64
SNX1-205ENST00000559339 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.79□□□□□ -1.64
SNX1-205ENST00000559339 IRAK3Q9Y616 596 aa4.79□□□□□ -1.64
SNX1-205ENST00000559339 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP4.78□□□□□ -1.64
SNX1-205ENST00000559339 NPHP3-ACAD11A0A0J9YXS1 232 aa4.78□□□□□ -1.64
SNX1-205ENST00000559339 GOLGA6L4A6NEF3 574 aa4.78□□□□□ -1.64
SNX1-205ENST00000559339 C2orf71A6NGG8 1288 aa4.78□□□□□ -1.64
SNX1-205ENST00000559339 TNFRSF10AO00220 468 aa4.78□□□□□ -1.64
SNX1-205ENST00000559339 C2CD2LO14523 706 aa4.78□□□□□ -1.64
SNX1-205ENST00000559339 FSCN2O14926 492 aa4.78□□□□□ -1.64
SNX1-205ENST00000559339 XPOTO43592 962 aaKnown RBP4.78□□□□□ -1.64
SNX1-205ENST00000559339 B3GAT3O94766 335 aa4.78□□□□□ -1.64
SNX1-205ENST00000559339 GCNT3O95395 438 aa4.78□□□□□ -1.64
SNX1-205ENST00000559339 BRD1O95696 1058 aa4.78□□□□□ -1.64
SNX1-205ENST00000559339 SOD2P04179 222 aa4.78□□□□□ -1.64
SNX1-205ENST00000559339 ADH1AP07327 375 aa4.78□□□□□ -1.64
SNX1-205ENST00000559339 HARSP12081 509 aaKnown RBP4.78□□□□□ -1.64
SNX1-205ENST00000559339 BMP1P13497 986 aa4.78□□□□□ -1.64
SNX1-205ENST00000559339 HOXB8P17481 243 aaPredicted RBP4.78□□□□□ -1.64
SNX1-205ENST00000559339 GAP43P17677 238 aa4.78□□□□□ -1.64
SNX1-205ENST00000559339 KLRC2P26717 231 aa4.78□□□□□ -1.64
SNX1-205ENST00000559339 SSTR3P32745 418 aaPredicted RBP4.78□□□□□ -1.64
SNX1-205ENST00000559339 GRM5P41594 1212 aa4.78□□□□□ -1.64
SNX1-205ENST00000559339 GLUD2P49448 558 aa4.78□□□□□ -1.64
SNX1-205ENST00000559339 KCNQ1P51787 676 aa4.78□□□□□ -1.64
SNX1-205ENST00000559339 AFF1P51825 1210 aaKnown RBP4.78□□□□□ -1.64
SNX1-205ENST00000559339 NCKAP1LP55160 1127 aa4.78□□□□□ -1.64
SNX1-205ENST00000559339 OSTNP61366 133 aa4.78□□□□□ -1.64
SNX1-205ENST00000559339 NUCB2P80303 420 aa4.78□□□□□ -1.64
SNX1-205ENST00000559339 DNM1Q05193 864 aaKnown RBP4.78□□□□□ -1.64
SNX1-205ENST00000559339 ITIH3Q06033 890 aa4.78□□□□□ -1.64
SNX1-205ENST00000559339 MCL1Q07820 350 aa4.78□□□□□ -1.64
SNX1-205ENST00000559339 DSC1Q08554 894 aa4.78□□□□□ -1.64
SNX1-205ENST00000559339 ELAVL2Q12926 359 aaKnown RBP4.78□□□□□ -1.64
SNX1-205ENST00000559339 ADAM15Q13444 863 aa4.78□□□□□ -1.64
SNX1-205ENST00000559339 ALCAMQ13740 583 aa4.78□□□□□ -1.64
SNX1-205ENST00000559339 HSP90AA2PQ14568 343 aaPredicted RBP4.78□□□□□ -1.64
SNX1-205ENST00000559339 COL19A1Q14993 1142 aa4.78□□□□□ -1.64
SNX1-205ENST00000559339 POSTNQ15063 836 aa4.78□□□□□ -1.64
SNX1-205ENST00000559339 DUSP6Q16828 381 aa4.78□□□□□ -1.64
SNX1-205ENST00000559339 CTC1Q2NKJ3 1217 aa4.78□□□□□ -1.64
SNX1-205ENST00000559339 USP41Q3LFD5 358 aa4.78□□□□□ -1.64
SNX1-205ENST00000559339 HERC4Q5GLZ8 1057 aaPredicted RBP4.78□□□□□ -1.64
SNX1-205ENST00000559339 NT5DC1Q5TFE4 455 aa4.78□□□□□ -1.64
SNX1-205ENST00000559339 CES5AQ6NT32 575 aa4.78□□□□□ -1.64
SNX1-205ENST00000559339 PDXDC1Q6P996 788 aa4.78□□□□□ -1.64
SNX1-205ENST00000559339 TMEM184AQ6ZMB5 413 aa4.78□□□□□ -1.64
SNX1-205ENST00000559339 USP49Q70CQ1 688 aa4.78□□□□□ -1.64
SNX1-205ENST00000559339 DYMQ7RTS9 669 aa4.78□□□□□ -1.64
SNX1-205ENST00000559339 ZBTB33Q86T24 672 aa4.78□□□□□ -1.64
SNX1-205ENST00000559339 TMEM173Q86WV6 379 aaPredicted RBP4.78□□□□□ -1.64
SNX1-205ENST00000559339 CCDC65Q8IXS2 484 aa4.78□□□□□ -1.64
SNX1-205ENST00000559339 CEP57L1Q8IYX8 460 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms