RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 HASPINQ8TF76 798 aa13.35□□□□□ -0.27
SMAD3-206ENST00000558739 DNASE1L2Q92874 299 aa13.35□□□□□ -0.27
SMAD3-206ENST00000558739 MAP3K14Q99558 947 aa13.35□□□□□ -0.27
SMAD3-206ENST00000558739 CLSTN3Q9BQT9 956 aa13.35□□□□□ -0.27
SMAD3-206ENST00000558739 LZTS2Q9BRK4 669 aa13.35□□□□□ -0.27
SMAD3-206ENST00000558739 EIF2AQ9BY44 585 aaKnown RBP13.35□□□□□ -0.27
SMAD3-206ENST00000558739 TCEAL9Q9UHQ7 104 aa13.35□□□□□ -0.27
SMAD3-206ENST00000558739 PIAS3Q9Y6X2 628 aa13.35□□□□□ -0.27
SMAD3-206ENST00000558739 GON4LQ3T8J9 2241 aa13.35□□□□□ -0.27
SMAD3-206ENST00000558739 TMEM8BA6NDV4 472 aa13.34□□□□□ -0.27
SMAD3-206ENST00000558739 CHMP2AO43633 222 aa13.34□□□□□ -0.27
SMAD3-206ENST00000558739 EPN2O95208 641 aa13.34□□□□□ -0.27
SMAD3-206ENST00000558739 HNRNPA1P09651 372 aaKnown RBP eCLIP13.34□□□□□ -0.27
SMAD3-206ENST00000558739 PXNP49023 591 aaPredicted RBP13.34□□□□□ -0.27
SMAD3-206ENST00000558739 CLK2P49760 499 aaKnown RBP13.34□□□□□ -0.27
SMAD3-206ENST00000558739 ADCY7P51828 1080 aa13.34□□□□□ -0.27
SMAD3-206ENST00000558739 JAKMIP3Q5VZ66 844 aa13.34□□□□□ -0.27
SMAD3-206ENST00000558739 RNF43Q68DV7 783 aa13.34□□□□□ -0.27
SMAD3-206ENST00000558739 C19orf48Q6RUI8 117 aa13.34□□□□□ -0.27
SMAD3-206ENST00000558739 TMTC3Q6ZXV5 915 aa13.34□□□□□ -0.27
SMAD3-206ENST00000558739 FAM3CQ92520 227 aa13.34□□□□□ -0.27
SMAD3-206ENST00000558739 BBC3Q96PG8 261 aaPredicted RBP13.34□□□□□ -0.27
SMAD3-206ENST00000558739 BRD9Q9H8M2 597 aa13.34□□□□□ -0.27
SMAD3-206ENST00000558739 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.34□□□□□ -0.27
SMAD3-206ENST00000558739 KANSL3Q9P2N6 904 aa13.34□□□□□ -0.27
SMAD3-206ENST00000558739 SUCLA2Q9P2R7 463 aaPredicted RBP13.34□□□□□ -0.27
SMAD3-206ENST00000558739 ZBTB47Q9UFB7 747 aaPredicted RBP13.34□□□□□ -0.27
SMAD3-206ENST00000558739 SEPT9Q9UHD8 586 aaPredicted RBP13.34□□□□□ -0.27
SMAD3-206ENST00000558739 MRPS23Q9Y3D9 190 aaKnown RBP13.34□□□□□ -0.27
SMAD3-206ENST00000558739 IPPQ9Y573 584 aa13.34□□□□□ -0.27
SMAD3-206ENST00000558739 PCNX2A6NKB5 2137 aa13.34□□□□□ -0.27
SMAD3-206ENST00000558739 CNTNAP5Q8WYK1 1306 aa13.34□□□□□ -0.27
SMAD3-206ENST00000558739 IGKV6-21A0A0C4DH24 114 aa13.33□□□□□ -0.28
SMAD3-206ENST00000558739 MAN2B1O00754 1011 aa13.33□□□□□ -0.28
SMAD3-206ENST00000558739 STBD1O95210 358 aa13.33□□□□□ -0.28
SMAD3-206ENST00000558739 C1RP00736 705 aa13.33□□□□□ -0.28
SMAD3-206ENST00000558739 RAP1GAPP47736 663 aa13.33□□□□□ -0.28
SMAD3-206ENST00000558739 SOX9P48436 509 aa13.33□□□□□ -0.28
SMAD3-206ENST00000558739 PLA2G2CQ5R387 149 aa13.33□□□□□ -0.28
SMAD3-206ENST00000558739 SH3PXD2AQ5TCZ1 1133 aa13.33□□□□□ -0.28
SMAD3-206ENST00000558739 ZNF410Q86VK4 478 aa13.33□□□□□ -0.28
SMAD3-206ENST00000558739 SPEM1Q8N4L4 309 aa13.33□□□□□ -0.28
SMAD3-206ENST00000558739 NCOA7Q8NI08 942 aa13.33□□□□□ -0.28
SMAD3-206ENST00000558739 LENG9Q96B70 501 aa13.33□□□□□ -0.28
SMAD3-206ENST00000558739 TCEAL4Q96EI5 215 aa13.33□□□□□ -0.28
SMAD3-206ENST00000558739 IER2Q9BTL4 223 aa13.33□□□□□ -0.28
SMAD3-206ENST00000558739 APOL6Q9BWW8 343 aa13.33□□□□□ -0.28
SMAD3-206ENST00000558739 DISC1Q9NRI5 854 aa13.33□□□□□ -0.28
SMAD3-206ENST00000558739 ADAM28Q9UKQ2 775 aa13.33□□□□□ -0.28
SMAD3-206ENST00000558739 C4orf47A7E2U8 309 aa13.32□□□□□ -0.28
SMAD3-206ENST00000558739 WDR64B1ANS9 1081 aa13.32□□□□□ -0.28
SMAD3-206ENST00000558739 XYLBO75191 536 aa13.32□□□□□ -0.28
SMAD3-206ENST00000558739 FOSP01100 380 aaPredicted RBP13.32□□□□□ -0.28
SMAD3-206ENST00000558739 RHOP08100 348 aa13.32□□□□□ -0.28
SMAD3-206ENST00000558739 CCNE1P24864 410 aa13.32□□□□□ -0.28
SMAD3-206ENST00000558739 CNR2P34972 360 aa13.32□□□□□ -0.28
SMAD3-206ENST00000558739 PTGDRQ13258 359 aa13.32□□□□□ -0.28
SMAD3-206ENST00000558739 PRR16Q569H4 304 aa13.32□□□□□ -0.28
SMAD3-206ENST00000558739 FAM78AQ5JUQ0 283 aa13.32□□□□□ -0.28
SMAD3-206ENST00000558739 AXDND1Q5T1B0 1012 aaPredicted RBP13.32□□□□□ -0.28
SMAD3-206ENST00000558739 ABCA7Q8IZY2 2146 aa13.32□□□□□ -0.28
SMAD3-206ENST00000558739 GSTCDQ8NEC7 633 aa13.32□□□□□ -0.28
SMAD3-206ENST00000558739 ELSPBP1Q96BH3 223 aa13.32□□□□□ -0.28
SMAD3-206ENST00000558739 EDEM2Q9BV94 578 aa13.32□□□□□ -0.28
SMAD3-206ENST00000558739 ZNF334Q9HCZ1 680 aaPredicted RBP13.32□□□□□ -0.28
SMAD3-206ENST00000558739 NRBP2Q9NSY0 501 aa13.32□□□□□ -0.28
SMAD3-206ENST00000558739 TBC1D22BQ9NU19 505 aa13.32□□□□□ -0.28
SMAD3-206ENST00000558739 NUP205Q92621 2012 aa13.32□□□□□ -0.28
SMAD3-206ENST00000558739 PTPN13Q12923 2485 aa13.31□□□□□ -0.28
SMAD3-206ENST00000558739 SH2B2O14492 632 aaPredicted RBP13.31□□□□□ -0.28
SMAD3-206ENST00000558739 HYAL3O43820 417 aaPredicted RBP13.31□□□□□ -0.28
SMAD3-206ENST00000558739 PAPSS2O95340 614 aaPredicted RBP13.31□□□□□ -0.28
SMAD3-206ENST00000558739 ITGA4P13612 1032 aa13.31□□□□□ -0.28
SMAD3-206ENST00000558739 IGFBP6P24592 240 aaPredicted RBP13.31□□□□□ -0.28
SMAD3-206ENST00000558739 GDI1P31150 447 aa13.31□□□□□ -0.28
SMAD3-206ENST00000558739 HOXA9P31269 272 aa13.31□□□□□ -0.28
SMAD3-206ENST00000558739 MPLP40238 635 aa13.31□□□□□ -0.28
SMAD3-206ENST00000558739 GNAQP50148 359 aa13.31□□□□□ -0.28
SMAD3-206ENST00000558739 AP3B2Q13367 1082 aa13.31□□□□□ -0.28
SMAD3-206ENST00000558739 PSMD5Q16401 504 aa13.31□□□□□ -0.28
SMAD3-206ENST00000558739 TXNDC11Q6PKC3 985 aa13.31□□□□□ -0.28
SMAD3-206ENST00000558739 VITQ6UXI7 678 aa13.31□□□□□ -0.28
SMAD3-206ENST00000558739 MAP4K3Q8IVH8 894 aa13.31□□□□□ -0.28
SMAD3-206ENST00000558739 PLEKHM2Q8IWE5 1019 aa13.31□□□□□ -0.28
SMAD3-206ENST00000558739 LNX1Q8TBB1 728 aaPredicted RBP13.31□□□□□ -0.28
SMAD3-206ENST00000558739 UNC45AQ9H3U1 944 aa13.31□□□□□ -0.28
SMAD3-206ENST00000558739 NXF3Q9H4D5 531 aaKnown RBP13.31□□□□□ -0.28
SMAD3-206ENST00000558739 KLK13Q9UKR3 277 aa13.31□□□□□ -0.28
SMAD3-206ENST00000558739 KCNH3Q9ULD8 1083 aa13.31□□□□□ -0.28
SMAD3-206ENST00000558739 KIF26AQ9ULI4 1882 aaPredicted RBP13.31□□□□□ -0.28
SMAD3-206ENST00000558739 SMCO2A6NFE2 343 aa13.3□□□□□ -0.28
SMAD3-206ENST00000558739 ARNTLO00327 626 aa13.3□□□□□ -0.28
SMAD3-206ENST00000558739 EXTL3O43909 919 aa13.3□□□□□ -0.28
SMAD3-206ENST00000558739 KIF4AO95239 1232 aa13.3□□□□□ -0.28
SMAD3-206ENST00000558739 CYP3A4P08684 503 aa13.3□□□□□ -0.28
SMAD3-206ENST00000558739 CALM1P0DP23 149 aa13.3□□□□□ -0.28
SMAD3-206ENST00000558739 CALM2P0DP24 149 aa13.3□□□□□ -0.28
SMAD3-206ENST00000558739 CALM3P0DP25 149 aa13.3□□□□□ -0.28
SMAD3-206ENST00000558739 VIPR2P41587 438 aa13.3□□□□□ -0.28
SMAD3-206ENST00000558739 CCR2P41597 374 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms