RNA–Protein interactions for RNA: ENST00000558611.1

MARK3-213, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 5

Gene MARK3, Length 687 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-213ENST00000558611 ZSCAN25Q6NSZ9 544 aa11.53□□□□□ -0.56
MARK3-213ENST00000558611 OGFOD3Q6PK18 319 aa11.53□□□□□ -0.56
MARK3-213ENST00000558611 SVIPQ8NHG7 77 aa11.53□□□□□ -0.56
MARK3-213ENST00000558611 MPHOSPH6Q99547 160 aaKnown RBP11.53□□□□□ -0.56
MARK3-213ENST00000558611 CHST12Q9NRB3 414 aa11.53□□□□□ -0.56
MARK3-213ENST00000558611 HERC5Q9UII4 1024 aaKnown RBP11.53□□□□□ -0.56
MARK3-213ENST00000558611 PCDHA2Q9Y5H9 948 aa11.53□□□□□ -0.56
MARK3-213ENST00000558611 LAMA4Q16363 1823 aa11.52□□□□□ -0.57
MARK3-213ENST00000558611 FGF10O15520 208 aaPredicted RBP11.52□□□□□ -0.57
MARK3-213ENST00000558611 IGHDP01880 384 aa11.52□□□□□ -0.57
MARK3-213ENST00000558611 ENDOUP21128 410 aaKnown RBP11.52□□□□□ -0.57
MARK3-213ENST00000558611 TPP2P29144 1249 aaPredicted RBP11.52□□□□□ -0.57
MARK3-213ENST00000558611 GTF2A2P52657 109 aa11.52□□□□□ -0.57
MARK3-213ENST00000558611 PCBP3P57721 371 aaKnown RBP11.52□□□□□ -0.57
MARK3-213ENST00000558611 PURAQ00577 322 aaKnown RBP11.52□□□□□ -0.57
MARK3-213ENST00000558611 PPATQ06203 517 aa11.52□□□□□ -0.57
MARK3-213ENST00000558611 UBE3CQ15386 1083 aa11.52□□□□□ -0.57
MARK3-213ENST00000558611 CRY1Q16526 586 aa11.52□□□□□ -0.57
MARK3-213ENST00000558611 INF2Q27J81 1249 aa11.52□□□□□ -0.57
MARK3-213ENST00000558611 TPH2Q8IWU9 490 aa11.52□□□□□ -0.57
MARK3-213ENST00000558611 SCYL3Q8IZE3 742 aa11.52□□□□□ -0.57
MARK3-213ENST00000558611 LCORLQ8N3X6 602 aa11.52□□□□□ -0.57
MARK3-213ENST00000558611 KBTBD3Q8NAB2 608 aa11.52□□□□□ -0.57
MARK3-213ENST00000558611 FAXDC2Q96IV6 333 aa11.52□□□□□ -0.57
MARK3-213ENST00000558611 CRNKL1Q9BZJ0 848 aaKnown RBP11.52□□□□□ -0.57
MARK3-213ENST00000558611 KCNF1Q9H3M0 494 aa11.52□□□□□ -0.57
MARK3-213ENST00000558611 PI4KBQ9UBF8 816 aa11.52□□□□□ -0.57
MARK3-213ENST00000558611 SAP30BPQ9UHR5 308 aaKnown RBP11.52□□□□□ -0.57
MARK3-213ENST00000558611 PALD1Q9ULE6 856 aa11.52□□□□□ -0.57
MARK3-213ENST00000558611 GREB1LQ9C091 1923 aaPredicted RBP11.52□□□□□ -0.57
MARK3-213ENST00000558611 PARP14Q460N5 1801 aa11.51□□□□□ -0.57
MARK3-213ENST00000558611 CCL15-CCL14A0A0B4J2E2 113 aa11.51□□□□□ -0.57
MARK3-213ENST00000558611 VSTM5A8MXK1 200 aa11.51□□□□□ -0.57
MARK3-213ENST00000558611 CTNND1O60716 968 aaKnown RBP11.51□□□□□ -0.57
MARK3-213ENST00000558611 MBD4O95243 580 aa11.51□□□□□ -0.57
MARK3-213ENST00000558611 CHGBP05060 677 aa11.51□□□□□ -0.57
MARK3-213ENST00000558611 HLA-DOAP06340 250 aa11.51□□□□□ -0.57
MARK3-213ENST00000558611 CYP2C19P33261 490 aa11.51□□□□□ -0.57
MARK3-213ENST00000558611 CCL15Q16663 113 aa11.51□□□□□ -0.57
MARK3-213ENST00000558611 LONRF3Q496Y0 759 aa11.51□□□□□ -0.57
MARK3-213ENST00000558611 TSHZ1Q6ZSZ6 1077 aa11.51□□□□□ -0.57
MARK3-213ENST00000558611 BEND4Q6ZU67 534 aa11.51□□□□□ -0.57
MARK3-213ENST00000558611 TSPYL5Q86VY4 417 aaPredicted RBP11.51□□□□□ -0.57
MARK3-213ENST00000558611 PTPN18Q99952 460 aa11.51□□□□□ -0.57
MARK3-213ENST00000558611 DNAJC18Q9H819 358 aa11.51□□□□□ -0.57
MARK3-213ENST00000558611 C14orf119Q9NWQ9 140 aa11.51□□□□□ -0.57
MARK3-213ENST00000558611 SYPP08247 313 aa11.5□□□□□ -0.57
MARK3-213ENST00000558611 PF4V1P10720 104 aa11.5□□□□□ -0.57
MARK3-213ENST00000558611 CETPP11597 493 aa11.5□□□□□ -0.57
MARK3-213ENST00000558611 VCAM1P19320 739 aa11.5□□□□□ -0.57
MARK3-213ENST00000558611 LSAMPQ13449 338 aa11.5□□□□□ -0.57
MARK3-213ENST00000558611 SNAPC2Q13487 334 aa11.5□□□□□ -0.57
MARK3-213ENST00000558611 GTF2H3Q13889 308 aa11.5□□□□□ -0.57
MARK3-213ENST00000558611 ADGRE1Q14246 886 aa11.5□□□□□ -0.57
MARK3-213ENST00000558611 PCBP2Q15366 365 aaKnown RBP eCLIP11.5□□□□□ -0.57
MARK3-213ENST00000558611 SLC4A8Q2Y0W8 1093 aa11.5□□□□□ -0.57
MARK3-213ENST00000558611 CYP27C1Q4G0S4 372 aa11.5□□□□□ -0.57
MARK3-213ENST00000558611 OTUD7BQ6GQQ9 843 aa11.5□□□□□ -0.57
MARK3-213ENST00000558611 FOXP4Q8IVH2 680 aaPredicted RBP11.5□□□□□ -0.57
MARK3-213ENST00000558611 CISD2Q8N5K1 135 aaKnown RBP11.5□□□□□ -0.57
MARK3-213ENST00000558611 BRI3BPQ8WY22 251 aa11.5□□□□□ -0.57
MARK3-213ENST00000558611 GATA6Q92908 595 aa11.5□□□□□ -0.57
MARK3-213ENST00000558611 PTCHD1Q96NR3 888 aa11.5□□□□□ -0.57
MARK3-213ENST00000558611 BOCQ9BWV1 1114 aa11.5□□□□□ -0.57
MARK3-213ENST00000558611 ARMT1Q9H993 441 aa11.5□□□□□ -0.57
MARK3-213ENST00000558611 CATSPERZQ9NTU4 200 aa11.5□□□□□ -0.57
MARK3-213ENST00000558611 H2AFY2Q9P0M6 372 aaPredicted RBP11.5□□□□□ -0.57
MARK3-213ENST00000558611 STAP2Q9UGK3 403 aa11.5□□□□□ -0.57
MARK3-213ENST00000558611 CBLCQ9ULV8 474 aa11.5□□□□□ -0.57
MARK3-213ENST00000558611 TRIM75PA6NK02 468 aa11.49□□□□□ -0.57
MARK3-213ENST00000558611 TGM5O43548 720 aa11.49□□□□□ -0.57
MARK3-213ENST00000558611 TBC1D8O95759 1140 aa11.49□□□□□ -0.57
MARK3-213ENST00000558611 ZFYP08048 801 aaPredicted RBP11.49□□□□□ -0.57
MARK3-213ENST00000558611 PDE1AP54750 535 aa11.49□□□□□ -0.57
MARK3-213ENST00000558611 PHC1P78364 1004 aa11.49□□□□□ -0.57
MARK3-213ENST00000558611 NUCB1Q02818 461 aa11.49□□□□□ -0.57
MARK3-213ENST00000558611 BROXQ5VW32 411 aa11.49□□□□□ -0.57
MARK3-213ENST00000558611 MBLAC2Q68D91 279 aa11.49□□□□□ -0.57
MARK3-213ENST00000558611 CHD1LQ86WJ1 897 aa11.49□□□□□ -0.57
MARK3-213ENST00000558611 CLEC10AQ8IUN9 316 aa11.49□□□□□ -0.57
MARK3-213ENST00000558611 SDR42E1Q8WUS8 393 aa11.49□□□□□ -0.57
MARK3-213ENST00000558611 NUP88Q99567 741 aaPredicted RBP11.49□□□□□ -0.57
MARK3-213ENST00000558611 CDIP1Q9H305 208 aa11.49□□□□□ -0.57
MARK3-213ENST00000558611 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.49□□□□□ -0.57
MARK3-213ENST00000558611 TCFL5Q9UL49 500 aa11.49□□□□□ -0.57
MARK3-213ENST00000558611 TIMM13Q9Y5L4 95 aaPredicted RBP11.49□□□□□ -0.57
MARK3-213ENST00000558611 MRFAP1Q9Y605 127 aa11.49□□□□□ -0.57
MARK3-213ENST00000558611 DOCK3Q8IZD9 2030 aa11.48□□□□□ -0.57
MARK3-213ENST00000558611 RNF113AO15541 343 aaKnown RBP11.48□□□□□ -0.57
MARK3-213ENST00000558611 DHX15O43143 795 aaKnown RBP11.48□□□□□ -0.57
MARK3-213ENST00000558611 LDHAP00338 332 aaKnown RBP11.48□□□□□ -0.57
MARK3-213ENST00000558611 RBM10P98175 930 aaKnown RBP11.48□□□□□ -0.57
MARK3-213ENST00000558611 RRP1BQ14684 758 aaKnown RBP11.48□□□□□ -0.57
MARK3-213ENST00000558611 TERF2Q15554 542 aa11.48□□□□□ -0.57
MARK3-213ENST00000558611 LCE2CQ5TA81 110 aa11.48□□□□□ -0.57
MARK3-213ENST00000558611 PGM2L1Q6PCE3 622 aa11.48□□□□□ -0.57
MARK3-213ENST00000558611 RASSF3Q86WH2 238 aa11.48□□□□□ -0.57
MARK3-213ENST00000558611 FAM43AQ8N2R8 423 aa11.48□□□□□ -0.57
MARK3-213ENST00000558611 AIFM3Q96NN9 605 aa11.48□□□□□ -0.57
MARK3-213ENST00000558611 FAM83CQ9BQN1 747 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms