RNA–Protein interactions for RNA: ENST00000558411.1

PCAT29-201, prostate cancer associated transcript 29, humanhuman

TSL 2 BASIC

Gene PCAT29, Length 2,121 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-201ENST00000558411 PHLDB3Q6NSJ2 640 aa11.96□□□□□ -0.49
PCAT29-201ENST00000558411 AADACL2Q6P093 401 aa11.96□□□□□ -0.49
PCAT29-201ENST00000558411 RFWD3Q6PCD5 774 aa11.96□□□□□ -0.49
PCAT29-201ENST00000558411 DSTYKQ6XUX3 929 aa11.96□□□□□ -0.49
PCAT29-201ENST00000558411 CLNKQ7Z7G1 428 aa11.96□□□□□ -0.49
PCAT29-201ENST00000558411 ZNF384Q8TF68 577 aa11.96□□□□□ -0.49
PCAT29-201ENST00000558411 PPP1R14BQ96C90 147 aa11.96□□□□□ -0.49
PCAT29-201ENST00000558411 SNF8Q96H20 258 aa11.96□□□□□ -0.49
PCAT29-201ENST00000558411 THAP2Q9H0W7 228 aa11.96□□□□□ -0.49
PCAT29-201ENST00000558411 OCEL1Q9H607 264 aa11.96□□□□□ -0.49
PCAT29-201ENST00000558411 ANGPTL2Q9UKU9 493 aa11.96□□□□□ -0.49
PCAT29-201ENST00000558411 SMG5Q9UPR3 1016 aaKnown RBP11.96□□□□□ -0.49
PCAT29-201ENST00000558411 RASA4BC9J798 803 aa11.96□□□□□ -0.5
PCAT29-201ENST00000558411 KLRF2D3W0D1 207 aa11.96□□□□□ -0.5
PCAT29-201ENST00000558411 GSC2O15499 205 aa11.96□□□□□ -0.5
PCAT29-201ENST00000558411 RASA4O43374 803 aa11.96□□□□□ -0.5
PCAT29-201ENST00000558411 KRT36O76013 467 aa11.96□□□□□ -0.5
PCAT29-201ENST00000558411 ABHD2P08910 425 aa11.96□□□□□ -0.5
PCAT29-201ENST00000558411 CYP2D6P10635 497 aa11.96□□□□□ -0.5
PCAT29-201ENST00000558411 TNFAIP3P21580 790 aa11.96□□□□□ -0.5
PCAT29-201ENST00000558411 RPL13P26373 211 aaKnown RBP11.96□□□□□ -0.5
PCAT29-201ENST00000558411 TPP2P29144 1249 aaPredicted RBP11.96□□□□□ -0.5
PCAT29-201ENST00000558411 WDR72Q3MJ13 1102 aa11.96□□□□□ -0.5
PCAT29-201ENST00000558411 DCAF17Q5H9S7 520 aaPredicted RBP11.96□□□□□ -0.5
PCAT29-201ENST00000558411 CEP128Q6ZU80 1094 aa11.96□□□□□ -0.5
PCAT29-201ENST00000558411 HS2ST1Q7LGA3 356 aa11.96□□□□□ -0.5
PCAT29-201ENST00000558411 NLRP9Q7RTR0 991 aa11.96□□□□□ -0.5
PCAT29-201ENST00000558411 DNAJC10Q8IXB1 793 aa11.96□□□□□ -0.5
PCAT29-201ENST00000558411 SYCP3Q8IZU3 236 aa11.96□□□□□ -0.5
PCAT29-201ENST00000558411 MAML1Q92585 1016 aa11.96□□□□□ -0.5
PCAT29-201ENST00000558411 KRT35Q92764 455 aa11.96□□□□□ -0.5
PCAT29-201ENST00000558411 SLC35C1Q96A29 364 aa11.96□□□□□ -0.5
PCAT29-201ENST00000558411 PREBQ9HCU5 417 aa11.96□□□□□ -0.5
PCAT29-201ENST00000558411 NINJ2Q9NZG7 142 aa11.96□□□□□ -0.5
PCAT29-201ENST00000558411 SENP1Q9P0U3 644 aa11.96□□□□□ -0.5
PCAT29-201ENST00000558411 FRMPD4Q14CM0 1322 aa11.96□□□□□ -0.5
PCAT29-201ENST00000558411 SHANK3Q9BYB0 1731 aa11.96□□□□□ -0.5
PCAT29-201ENST00000558411 SORBS3O60504 671 aa11.95□□□□□ -0.5
PCAT29-201ENST00000558411 MTA2O94776 668 aa11.95□□□□□ -0.5
PCAT29-201ENST00000558411 CYP1A1P04798 512 aaPredicted RBP11.95□□□□□ -0.5
PCAT29-201ENST00000558411 PLA2G4BP0C869 781 aa11.95□□□□□ -0.5
PCAT29-201ENST00000558411 PABPC4LP0CB38 370 aaKnown RBP11.95□□□□□ -0.5
PCAT29-201ENST00000558411 DESP17661 470 aa11.95□□□□□ -0.5
PCAT29-201ENST00000558411 ATF3P18847 181 aa11.95□□□□□ -0.5
PCAT29-201ENST00000558411 CHKAP35790 457 aa11.95□□□□□ -0.5
PCAT29-201ENST00000558411 CHRNDQ07001 517 aa11.95□□□□□ -0.5
PCAT29-201ENST00000558411 MAP7Q14244 749 aa11.95□□□□□ -0.5
PCAT29-201ENST00000558411 KYNUQ16719 465 aa11.95□□□□□ -0.5
PCAT29-201ENST00000558411 TMEM63BQ5T3F8 832 aa11.95□□□□□ -0.5
PCAT29-201ENST00000558411 FYB2Q5VWT5 728 aa11.95□□□□□ -0.5
PCAT29-201ENST00000558411 ZNF34Q8IZ26 560 aa11.95□□□□□ -0.5
PCAT29-201ENST00000558411 NME8Q8N427 588 aa11.95□□□□□ -0.5
PCAT29-201ENST00000558411 PTCD3Q96EY7 689 aaKnown RBP11.95□□□□□ -0.5
PCAT29-201ENST00000558411 RBM17Q96I25 401 aaKnown RBP11.95□□□□□ -0.5
PCAT29-201ENST00000558411 KRT82Q9NSB4 513 aa11.95□□□□□ -0.5
PCAT29-201ENST00000558411 BIN2Q9UBW5 565 aaPredicted RBP11.95□□□□□ -0.5
PCAT29-201ENST00000558411 DNAJB4Q9UDY4 337 aa11.95□□□□□ -0.5
PCAT29-201ENST00000558411 PTPN22Q9Y2R2 807 aa11.95□□□□□ -0.5
PCAT29-201ENST00000558411 SPATA31A1Q5TZJ5 1347 aa11.95□□□□□ -0.5
PCAT29-201ENST00000558411 LAMB2P55268 1798 aa11.95□□□□□ -0.5
PCAT29-201ENST00000558411 ZMYM2Q9UBW7 1377 aa11.95□□□□□ -0.5
PCAT29-201ENST00000558411 A0A1W2PRG0 241 aa11.95□□□□□ -0.5
PCAT29-201ENST00000558411 F8W8V4 182 aa11.95□□□□□ -0.5
PCAT29-201ENST00000558411 TDP2O95551 362 aa11.95□□□□□ -0.5
PCAT29-201ENST00000558411 FAM200BP0CF97 657 aa11.95□□□□□ -0.5
PCAT29-201ENST00000558411 PIM1P11309 404 aaPredicted RBP11.95□□□□□ -0.5
PCAT29-201ENST00000558411 CYP11B2P19099 503 aa11.95□□□□□ -0.5
PCAT29-201ENST00000558411 KRT17Q04695 432 aa11.95□□□□□ -0.5
PCAT29-201ENST00000558411 PTK6Q13882 451 aa11.95□□□□□ -0.5
PCAT29-201ENST00000558411 DBN1Q16643 649 aa11.95□□□□□ -0.5
PCAT29-201ENST00000558411 ZC2HC1CQ53FD0 456 aaPredicted RBP11.95□□□□□ -0.5
PCAT29-201ENST00000558411 MARK2Q7KZI7 788 aaKnown RBP11.95□□□□□ -0.5
PCAT29-201ENST00000558411 TRABD2AQ86V40 505 aa11.95□□□□□ -0.5
PCAT29-201ENST00000558411 GPBP1Q86WP2 473 aa11.95□□□□□ -0.5
PCAT29-201ENST00000558411 TDRPQ86YL5 185 aa11.95□□□□□ -0.5
PCAT29-201ENST00000558411 ST13P4Q8IZP2 240 aaPredicted RBP11.95□□□□□ -0.5
PCAT29-201ENST00000558411 ARHGAP24Q8N264 748 aa11.95□□□□□ -0.5
PCAT29-201ENST00000558411 CD101Q93033 1021 aa11.95□□□□□ -0.5
PCAT29-201ENST00000558411 NSUN4Q96CB9 384 aaKnown RBP11.95□□□□□ -0.5
PCAT29-201ENST00000558411 TRAIPQ9BWF2 469 aa11.95□□□□□ -0.5
PCAT29-201ENST00000558411 STK32BQ9NY57 414 aa11.95□□□□□ -0.5
PCAT29-201ENST00000558411 NDUFA13Q9P0J0 144 aa11.95□□□□□ -0.5
PCAT29-201ENST00000558411 ZNF510Q9Y2H8 683 aa11.95□□□□□ -0.5
PCAT29-201ENST00000558411 FAM196BA6NMK8 535 aa11.94□□□□□ -0.5
PCAT29-201ENST00000558411 FOXO6A8MYZ6 492 aa11.94□□□□□ -0.5
PCAT29-201ENST00000558411 ATP9BO43861 1147 aa11.94□□□□□ -0.5
PCAT29-201ENST00000558411 EXOC3O60645 756 aa11.94□□□□□ -0.5
PCAT29-201ENST00000558411 AKAP3O75969 853 aa11.94□□□□□ -0.5
PCAT29-201ENST00000558411 TMCC1O94876 653 aa11.94□□□□□ -0.5
PCAT29-201ENST00000558411 PYGMP11217 842 aa11.94□□□□□ -0.5
PCAT29-201ENST00000558411 CETPP11597 493 aa11.94□□□□□ -0.5
PCAT29-201ENST00000558411 RTP1P59025 263 aa11.94□□□□□ -0.5
PCAT29-201ENST00000558411 KIF22Q14807 665 aa11.94□□□□□ -0.5
PCAT29-201ENST00000558411 DRAP1Q14919 205 aaPredicted RBP11.94□□□□□ -0.5
PCAT29-201ENST00000558411 BMT2Q1RMZ1 405 aa11.94□□□□□ -0.5
PCAT29-201ENST00000558411 C1QTNF12Q5T7M4 302 aa11.94□□□□□ -0.5
PCAT29-201ENST00000558411 GJB7Q6PEY0 223 aa11.94□□□□□ -0.5
PCAT29-201ENST00000558411 RNF207Q6ZRF8 634 aa11.94□□□□□ -0.5
PCAT29-201ENST00000558411 BBOF1Q8ND07 529 aa11.94□□□□□ -0.5
PCAT29-201ENST00000558411 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms