RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 CDCA5Q96FF9 252 aa11.38□□□□□ -0.59
TPM1-210ENST00000558264 HES6Q96HZ4 224 aa11.38□□□□□ -0.59
TPM1-210ENST00000558264 C17orf75Q9HAS0 396 aa11.38□□□□□ -0.59
TPM1-210ENST00000558264 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.38□□□□□ -0.59
TPM1-210ENST00000558264 SUCLA2Q9P2R7 463 aaPredicted RBP11.38□□□□□ -0.59
TPM1-210ENST00000558264 RNF14Q9UBS8 474 aa11.38□□□□□ -0.59
TPM1-210ENST00000558264 OTOFQ9HC10 1997 aa11.38□□□□□ -0.59
TPM1-210ENST00000558264 GOLGA6BA6NDN3 693 aa11.37□□□□□ -0.59
TPM1-210ENST00000558264 MAPK13O15264 365 aa11.37□□□□□ -0.59
TPM1-210ENST00000558264 DDX3YO15523 660 aaKnown RBP11.37□□□□□ -0.59
TPM1-210ENST00000558264 STAT5BP51692 787 aa11.37□□□□□ -0.59
TPM1-210ENST00000558264 TNNC1P63316 161 aa11.37□□□□□ -0.59
TPM1-210ENST00000558264 HLTFQ14527 1009 aaKnown RBP eCLIP11.37□□□□□ -0.59
TPM1-210ENST00000558264 SYCE1Q8N0S2 351 aa11.37□□□□□ -0.59
TPM1-210ENST00000558264 SHC3Q92529 594 aa11.37□□□□□ -0.59
TPM1-210ENST00000558264 HVCN1Q96D96 273 aa11.37□□□□□ -0.59
TPM1-210ENST00000558264 PBKQ96KB5 322 aa11.37□□□□□ -0.59
TPM1-210ENST00000558264 FBXL18Q96ME1 805 aa11.37□□□□□ -0.59
TPM1-210ENST00000558264 FNBP1Q96RU3 617 aa11.37□□□□□ -0.59
TPM1-210ENST00000558264 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.37□□□□□ -0.591e-6■□□□□ 10.6
TPM1-210ENST00000558264 TRIM31Q9BZY9 425 aa11.37□□□□□ -0.59
TPM1-210ENST00000558264 PORCNQ9H237 461 aa11.37□□□□□ -0.59
TPM1-210ENST00000558264 DHX33Q9H6R0 707 aaKnown RBP11.37□□□□□ -0.59
TPM1-210ENST00000558264 FAM204AQ9H8W3 233 aa11.37□□□□□ -0.59
TPM1-210ENST00000558264 AGO2Q9UKV8 859 aaKnown RBP11.37□□□□□ -0.59
TPM1-210ENST00000558264 PTPRFP10586 1907 aa11.37□□□□□ -0.59
TPM1-210ENST00000558264 A0A0G2JLL6 359 aaPredicted RBP11.37□□□□□ -0.59
TPM1-210ENST00000558264 SART1O43290 800 aaKnown RBP11.37□□□□□ -0.59
TPM1-210ENST00000558264 SRGAP2CP0DJJ0 459 aa11.37□□□□□ -0.59
TPM1-210ENST00000558264 ICAM3P32942 547 aa11.37□□□□□ -0.59
TPM1-210ENST00000558264 SNRPFP62306 86 aaKnown RBP11.37□□□□□ -0.59
TPM1-210ENST00000558264 ERVK-9P63128 1117 aa11.37□□□□□ -0.59
TPM1-210ENST00000558264 CAPSQ13938 189 aa11.37□□□□□ -0.59
TPM1-210ENST00000558264 TDRD10Q5VZ19 366 aaKnown RBP11.37□□□□□ -0.59
TPM1-210ENST00000558264 PRRT2Q7Z6L0 340 aaPredicted RBP11.37□□□□□ -0.59
TPM1-210ENST00000558264 CDR2LQ86X02 465 aaPredicted RBP11.37□□□□□ -0.59
TPM1-210ENST00000558264 IFT20Q8IY31 132 aa11.37□□□□□ -0.59
TPM1-210ENST00000558264 OPTNQ96CV9 577 aa11.37□□□□□ -0.59
TPM1-210ENST00000558264 FAM212AQ96EL1 285 aa11.37□□□□□ -0.59
TPM1-210ENST00000558264 ACBD3Q9H3P7 528 aa11.37□□□□□ -0.59
TPM1-210ENST00000558264 ZNF408Q9H9D4 720 aa11.37□□□□□ -0.59
TPM1-210ENST00000558264 ALG6Q9Y672 507 aa11.37□□□□□ -0.59
TPM1-210ENST00000558264 PAPPA2Q9BXP8 1791 aa11.36□□□□□ -0.59
TPM1-210ENST00000558264 ATG7O95352 703 aa11.36□□□□□ -0.59
TPM1-210ENST00000558264 CYP2C8P10632 490 aa11.36□□□□□ -0.59
TPM1-210ENST00000558264 CYP2C19P33261 490 aa11.36□□□□□ -0.59
TPM1-210ENST00000558264 PIK3CAP42336 1068 aa11.36□□□□□ -0.59
TPM1-210ENST00000558264 PDE6CP51160 858 aa11.36□□□□□ -0.59
TPM1-210ENST00000558264 GPC3P51654 580 aa11.36□□□□□ -0.59
TPM1-210ENST00000558264 EPHB4P54760 987 aa11.36□□□□□ -0.59
TPM1-210ENST00000558264 PPARDQ03181 441 aa11.36□□□□□ -0.59
TPM1-210ENST00000558264 GJC2Q5T442 439 aaPredicted RBP11.36□□□□□ -0.59
TPM1-210ENST00000558264 CRELD2Q6UXH1 353 aaPredicted RBP11.36□□□□□ -0.59
TPM1-210ENST00000558264 FAM71BQ8TC56 605 aa11.36□□□□□ -0.59
TPM1-210ENST00000558264 ACTRT1Q8TDG2 376 aa11.36□□□□□ -0.59
TPM1-210ENST00000558264 TMC2Q8TDI7 906 aa11.36□□□□□ -0.59
TPM1-210ENST00000558264 SCFD2Q8WU76 684 aa11.36□□□□□ -0.59
TPM1-210ENST00000558264 TMEM174Q8WUU8 243 aa11.36□□□□□ -0.59
TPM1-210ENST00000558264 UPF1Q92900 1129 aaKnown RBP eCLIP11.36□□□□□ -0.59
TPM1-210ENST00000558264 ZNF653Q96CK0 615 aa11.36□□□□□ -0.59
TPM1-210ENST00000558264 PPP1R16BQ96T49 567 aa11.36□□□□□ -0.59
TPM1-210ENST00000558264 MSTO1Q9BUK6 570 aa11.36□□□□□ -0.59
TPM1-210ENST00000558264 ERVK-5Q9HDB9 667 aa11.36□□□□□ -0.59
TPM1-210ENST00000558264 GDF3Q9NR23 364 aa11.36□□□□□ -0.59
TPM1-210ENST00000558264 RBAKQ9NYW8 714 aaPredicted RBP11.36□□□□□ -0.59
TPM1-210ENST00000558264 TMEM59LQ9UK28 342 aa11.36□□□□□ -0.59
TPM1-210ENST00000558264 UMODL1Q5DID0 1318 aa11.36□□□□□ -0.59
TPM1-210ENST00000558264 TTI1O43156 1089 aa11.36□□□□□ -0.59
TPM1-210ENST00000558264 EXTL3O43909 919 aa11.36□□□□□ -0.59
TPM1-210ENST00000558264 HLA-DRAP01903 254 aa11.36□□□□□ -0.59
TPM1-210ENST00000558264 GARTP22102 1010 aa11.36□□□□□ -0.59
TPM1-210ENST00000558264 TNFSF9P41273 254 aa11.36□□□□□ -0.59
TPM1-210ENST00000558264 GPC5P78333 572 aa11.36□□□□□ -0.59
TPM1-210ENST00000558264 MKRN4PQ13434 485 aaPredicted RBP11.36□□□□□ -0.59
TPM1-210ENST00000558264 DNAJC21Q5F1R6 531 aaKnown RBP11.36□□□□□ -0.59
TPM1-210ENST00000558264 ERO1BQ86YB8 467 aa11.36□□□□□ -0.59
TPM1-210ENST00000558264 PASD1Q8IV76 773 aa11.36□□□□□ -0.59
TPM1-210ENST00000558264 PRPF31Q8WWY3 499 aaKnown RBP11.36□□□□□ -0.59
TPM1-210ENST00000558264 RNPC3Q96LT9 517 aaKnown RBP11.36□□□□□ -0.59
TPM1-210ENST00000558264 FGD4Q96M96 766 aa11.36□□□□□ -0.59
TPM1-210ENST00000558264 CEP89Q96ST8 783 aa11.36□□□□□ -0.59
TPM1-210ENST00000558264 ISCUQ9H1K1 167 aa11.36□□□□□ -0.59
TPM1-210ENST00000558264 DPH5Q9H2P9 285 aa11.36□□□□□ -0.59
TPM1-210ENST00000558264 SPON1Q9HCB6 807 aa11.36□□□□□ -0.59
TPM1-210ENST00000558264 PDGFCQ9NRA1 345 aa11.36□□□□□ -0.59
TPM1-210ENST00000558264 RBPJLQ9UBG7 517 aa11.36□□□□□ -0.59
TPM1-210ENST00000558264 COQ4Q9Y3A0 265 aa11.36□□□□□ -0.59
TPM1-210ENST00000558264 SBF1O95248 1867 aa11.35□□□□□ -0.59
TPM1-210ENST00000558264 RTN2O75298 545 aa11.35□□□□□ -0.59
TPM1-210ENST00000558264 CFHP08603 1231 aa11.35□□□□□ -0.59
TPM1-210ENST00000558264 COMTP21964 271 aa11.35□□□□□ -0.59
TPM1-210ENST00000558264 ARL2P36404 184 aa11.35□□□□□ -0.59
TPM1-210ENST00000558264 GLE1Q53GS7 698 aaKnown RBP11.35□□□□□ -0.59
TPM1-210ENST00000558264 DAB2IPQ5VWQ8 1189 aa11.35□□□□□ -0.59
TPM1-210ENST00000558264 ANKRD13AQ8IZ07 590 aa11.35□□□□□ -0.59
TPM1-210ENST00000558264 TMEM130Q8N3G9 435 aa11.35□□□□□ -0.59
TPM1-210ENST00000558264 OR5B17Q8NGF7 314 aa11.35□□□□□ -0.59
TPM1-210ENST00000558264 PSPC1Q8WXF1 523 aaKnown RBP11.35□□□□□ -0.59
TPM1-210ENST00000558264 CPA5Q8WXQ8 436 aa11.35□□□□□ -0.59
TPM1-210ENST00000558264 TRIM51Q9BSJ1 452 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms