RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 SLC10A3P09131 477 aa8.96□□□□□ -0.98
SPG11-209ENST00000558253 TRIM49P0CI25 452 aa8.96□□□□□ -0.98
SPG11-209ENST00000558253 TRIM49CP0CI26 452 aa8.96□□□□□ -0.98
SPG11-209ENST00000558253 ZBTB48P10074 688 aaPredicted RBP8.96□□□□□ -0.98
SPG11-209ENST00000558253 RFC5P40937 340 aa8.96□□□□□ -0.98
SPG11-209ENST00000558253 AP3M2P53677 418 aa8.96□□□□□ -0.98
SPG11-209ENST00000558253 EIF3BP55884 814 aaKnown RBP8.96□□□□□ -0.98
SPG11-209ENST00000558253 PTENP60484 403 aa8.96□□□□□ -0.98
SPG11-209ENST00000558253 CLDN10P78369 228 aa8.96□□□□□ -0.98
SPG11-209ENST00000558253 SKOR1P84550 965 aa8.96□□□□□ -0.98
SPG11-209ENST00000558253 GCNT1Q02742 428 aa8.96□□□□□ -0.98
SPG11-209ENST00000558253 STRN3Q13033 797 aa8.96□□□□□ -0.98
SPG11-209ENST00000558253 BIRC3Q13489 604 aa8.96□□□□□ -0.98
SPG11-209ENST00000558253 STXBP2Q15833 593 aa8.96□□□□□ -0.98
SPG11-209ENST00000558253 SH3D19Q5HYK7 790 aa8.96□□□□□ -0.98
SPG11-209ENST00000558253 NSMFQ6X4W1 530 aa8.96□□□□□ -0.98
SPG11-209ENST00000558253 SLC30A10Q6XR72 485 aa8.96□□□□□ -0.98
SPG11-209ENST00000558253 TRIM72Q6ZMU5 477 aa8.96□□□□□ -0.98
SPG11-209ENST00000558253 GPD1LQ8N335 351 aa8.96□□□□□ -0.98
SPG11-209ENST00000558253 ARFGAP2Q8N6H7 521 aa8.96□□□□□ -0.98
SPG11-209ENST00000558253 FBXL13Q8NEE6 735 aa8.96□□□□□ -0.98
SPG11-209ENST00000558253 PARD3BQ8TEW8 1205 aa8.96□□□□□ -0.98
SPG11-209ENST00000558253 HDAC7Q8WUI4 952 aa8.96□□□□□ -0.98
SPG11-209ENST00000558253 NLRP7Q8WX94 980 aa8.96□□□□□ -0.98
SPG11-209ENST00000558253 PSMB7Q99436 277 aa8.96□□□□□ -0.98
SPG11-209ENST00000558253 NIFKQ9BYG3 293 aaKnown RBP8.96□□□□□ -0.98
SPG11-209ENST00000558253 TMEM117Q9H0C3 514 aa8.96□□□□□ -0.98
SPG11-209ENST00000558253 RAB20Q9NX57 234 aa8.96□□□□□ -0.98
SPG11-209ENST00000558253 SLC9A2Q9UBY0 812 aa8.96□□□□□ -0.98
SPG11-209ENST00000558253 RASAL2Q9UJF2 1139 aa8.96□□□□□ -0.98
SPG11-209ENST00000558253 MTUS1Q9ULD2 1270 aa8.96□□□□□ -0.98
SPG11-209ENST00000558253 NOC2LQ9Y3T9 749 aaKnown RBP8.96□□□□□ -0.98
SPG11-209ENST00000558253 STYXL1Q9Y6J8 313 aa8.96□□□□□ -0.98
SPG11-209ENST00000558253 LOC102724159A0A0B4J2E5 919 aa8.95□□□□□ -0.98
SPG11-209ENST00000558253 DENND3A2RUS2 1198 aa8.95□□□□□ -0.98
SPG11-209ENST00000558253 NFKBIEO00221 500 aa8.95□□□□□ -0.98
SPG11-209ENST00000558253 RAD51CO43502 376 aa8.95□□□□□ -0.98
SPG11-209ENST00000558253 GAS2O43903 313 aaKnown RBP8.95□□□□□ -0.98
SPG11-209ENST00000558253 EXTL3O43909 919 aa8.95□□□□□ -0.98
SPG11-209ENST00000558253 ATP9AO75110 1047 aa8.95□□□□□ -0.98
SPG11-209ENST00000558253 STBD1O95210 358 aa8.95□□□□□ -0.98
SPG11-209ENST00000558253 ATG7O95352 703 aa8.95□□□□□ -0.98
SPG11-209ENST00000558253 PIGRP01833 764 aa8.95□□□□□ -0.98
SPG11-209ENST00000558253 CYP1A2P05177 515 aa8.95□□□□□ -0.98
SPG11-209ENST00000558253 SUPT20HL2P0C7V6 817 aa8.95□□□□□ -0.98
SPG11-209ENST00000558253 MYBL2P10244 700 aa8.95□□□□□ -0.98
SPG11-209ENST00000558253 TGFB3P10600 412 aa8.95□□□□□ -0.98
SPG11-209ENST00000558253 KCNA2P16389 499 aa8.95□□□□□ -0.98
SPG11-209ENST00000558253 CHRNA3P32297 505 aa8.95□□□□□ -0.98
SPG11-209ENST00000558253 GCLMP48507 274 aa8.95□□□□□ -0.98
SPG11-209ENST00000558253 CDR1P51861 262 aa8.95□□□□□ -0.98
SPG11-209ENST00000558253 SLC7A5Q01650 507 aa8.95□□□□□ -0.98
SPG11-209ENST00000558253 CDR2Q01850 454 aa8.95□□□□□ -0.98
SPG11-209ENST00000558253 CYP24A1Q07973 514 aa8.95□□□□□ -0.98
SPG11-209ENST00000558253 PPP3CAQ08209 521 aa8.95□□□□□ -0.98
SPG11-209ENST00000558253 PWP2Q15269 919 aaKnown RBP8.95□□□□□ -0.98
SPG11-209ENST00000558253 ARHGAP44Q17R89 818 aa8.95□□□□□ -0.98
SPG11-209ENST00000558253 WDR44Q5JSH3 913 aa8.95□□□□□ -0.98
SPG11-209ENST00000558253 C1orf220Q5T0J3 134 aa8.95□□□□□ -0.98
SPG11-209ENST00000558253 SNRNP48Q6IEG0 339 aaKnown RBP8.95□□□□□ -0.98
SPG11-209ENST00000558253 GJB7Q6PEY0 223 aa8.95□□□□□ -0.98
SPG11-209ENST00000558253 KCNV1Q6PIU1 500 aa8.95□□□□□ -0.98
SPG11-209ENST00000558253 POTEAQ6S8J7 498 aa8.95□□□□□ -0.98
SPG11-209ENST00000558253 ABHD15Q6UXT9 468 aa8.95□□□□□ -0.98
SPG11-209ENST00000558253 ANO5Q75V66 913 aa8.95□□□□□ -0.98
SPG11-209ENST00000558253 SPATS2Q86XZ4 545 aaKnown RBP8.95□□□□□ -0.98
SPG11-209ENST00000558253 KSR1Q8IVT5 923 aa8.95□□□□□ -0.98
SPG11-209ENST00000558253 OLIG1Q8TAK6 271 aa8.95□□□□□ -0.98
SPG11-209ENST00000558253 IFT81Q8WYA0 676 aa8.95□□□□□ -0.98
SPG11-209ENST00000558253 ATG4CQ96DT6 458 aa8.95□□□□□ -0.98
SPG11-209ENST00000558253 KLRG1Q96E93 195 aa8.95□□□□□ -0.98
SPG11-209ENST00000558253 VCPIP1Q96JH7 1222 aa8.95□□□□□ -0.98
SPG11-209ENST00000558253 CBWD1Q9BRT8 395 aa8.95□□□□□ -0.98
SPG11-209ENST00000558253 TMUB1Q9BVT8 246 aa8.95□□□□□ -0.98
SPG11-209ENST00000558253 CYP26B1Q9NR63 512 aa8.95□□□□□ -0.98
SPG11-209ENST00000558253 HOMER2Q9NSB8 354 aa8.95□□□□□ -0.98
SPG11-209ENST00000558253 HOMER3Q9NSC5 361 aa8.95□□□□□ -0.98
SPG11-209ENST00000558253 NRBP2Q9NSY0 501 aa8.95□□□□□ -0.98
SPG11-209ENST00000558253 CYP39A1Q9NYL5 469 aa8.95□□□□□ -0.98
SPG11-209ENST00000558253 ARHGAP28Q9P2N2 729 aa8.95□□□□□ -0.98
SPG11-209ENST00000558253 GABBR1Q9UBS5 961 aa8.95□□□□□ -0.98
SPG11-209ENST00000558253 FEZ2Q9UHY8 353 aaPredicted RBP8.95□□□□□ -0.98
SPG11-209ENST00000558253 AJAP1Q9UKB5 411 aaPredicted RBP8.95□□□□□ -0.98
SPG11-209ENST00000558253 GTF3C4Q9UKN8 822 aa8.95□□□□□ -0.98
SPG11-209ENST00000558253 ZNF214Q9UL59 606 aaPredicted RBP8.95□□□□□ -0.98
SPG11-209ENST00000558253 DDX3YO15523 660 aaKnown RBP8.94□□□□□ -0.98
SPG11-209ENST00000558253 ZEB2O60315 1214 aa8.94□□□□□ -0.98
SPG11-209ENST00000558253 PPFIA4O75335 1185 aa8.94□□□□□ -0.98
SPG11-209ENST00000558253 CTNNA2P26232 953 aa8.94□□□□□ -0.98
SPG11-209ENST00000558253 MAN1A1P33908 653 aa8.94□□□□□ -0.98
SPG11-209ENST00000558253 SLC1A1P43005 524 aa8.94□□□□□ -0.98
SPG11-209ENST00000558253 NAMPTP43490 491 aa8.94□□□□□ -0.98
SPG11-209ENST00000558253 CARSP49589 748 aaKnown RBP8.94□□□□□ -0.98
SPG11-209ENST00000558253 PDE6CP51160 858 aa8.94□□□□□ -0.98
SPG11-209ENST00000558253 APLP1P51693 650 aa8.94□□□□□ -0.98
SPG11-209ENST00000558253 EFNA5P52803 228 aa8.94□□□□□ -0.98
SPG11-209ENST00000558253 HNRNPH2P55795 449 aaKnown RBP8.94□□□□□ -0.98
SPG11-209ENST00000558253 ACTR2P61160 394 aa8.94□□□□□ -0.98
SPG11-209ENST00000558253 GRM1Q13255 1194 aa8.94□□□□□ -0.98
SPG11-209ENST00000558253 PRPF4BQ13523 1007 aaKnown RBP8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms