RNA–Protein interactions for RNA: ENST00000558223.5

MARK3-212, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 908 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-212ENST00000558223 CUL5Q93034 780 aa7.92□□□□□ -1.14
MARK3-212ENST00000558223 HSPBAP1Q96EW2 488 aa7.92□□□□□ -1.14
MARK3-212ENST00000558223 MAGEB10Q96LZ2 347 aaPredicted RBP7.92□□□□□ -1.14
MARK3-212ENST00000558223 C7orf25Q9BPX7 421 aa7.92□□□□□ -1.14
MARK3-212ENST00000558223 NUP58Q9BVL2 599 aa7.92□□□□□ -1.14
MARK3-212ENST00000558223 NT5C3AQ9H0P0 336 aa7.92□□□□□ -1.14
MARK3-212ENST00000558223 THAP9Q9H5L6 903 aa7.92□□□□□ -1.14
MARK3-212ENST00000558223 RIC8AQ9NPQ8 531 aa7.92□□□□□ -1.14
MARK3-212ENST00000558223 C1orf112Q9NSG2 853 aa7.92□□□□□ -1.14
MARK3-212ENST00000558223 STK32BQ9NY57 414 aa7.92□□□□□ -1.14
MARK3-212ENST00000558223 LIMA1Q9UHB6 759 aaKnown RBP7.92□□□□□ -1.14
MARK3-212ENST00000558223 EVLQ9UI08 416 aaPredicted RBP7.92□□□□□ -1.14
MARK3-212ENST00000558223 HDAC9Q9UKV0 1011 aa7.92□□□□□ -1.14
MARK3-212ENST00000558223 JAG2Q9Y219 1238 aa7.92□□□□□ -1.14
MARK3-212ENST00000558223 SYNRGQ9UMZ2 1314 aa7.92□□□□□ -1.14
MARK3-212ENST00000558223 COL2A1P02458 1487 aaPredicted RBP7.92□□□□□ -1.14
MARK3-212ENST00000558223 NRXN2Q9P2S2 1712 aa7.92□□□□□ -1.14
MARK3-212ENST00000558223 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.91□□□□□ -1.14
MARK3-212ENST00000558223 K7ESF4 209 aa7.91□□□□□ -1.14
MARK3-212ENST00000558223 ZBTB5O15062 677 aa7.91□□□□□ -1.14
MARK3-212ENST00000558223 B3GALT4O96024 378 aa7.91□□□□□ -1.14
MARK3-212ENST00000558223 C6orf222P0C671 652 aaPredicted RBP7.91□□□□□ -1.14
MARK3-212ENST00000558223 AFMP43652 599 aa7.91□□□□□ -1.14
MARK3-212ENST00000558223 IREB2P48200 963 aaKnown RBP7.91□□□□□ -1.14
MARK3-212ENST00000558223 GRIN1Q05586 938 aa7.91□□□□□ -1.14
MARK3-212ENST00000558223 LRMPQ12912 555 aa7.91□□□□□ -1.14
MARK3-212ENST00000558223 AP3B2Q13367 1082 aa7.91□□□□□ -1.14
MARK3-212ENST00000558223 PCBP2Q15366 365 aaKnown RBP eCLIP7.91□□□□□ -1.14
MARK3-212ENST00000558223 GRIK5Q16478 980 aa7.91□□□□□ -1.14
MARK3-212ENST00000558223 INF2Q27J81 1249 aa7.91□□□□□ -1.14
MARK3-212ENST00000558223 EARS2Q5JPH6 523 aaKnown RBP7.91□□□□□ -1.14
MARK3-212ENST00000558223 SPECC1Q5M775 1068 aa7.91□□□□□ -1.14
MARK3-212ENST00000558223 CDKAL1Q5VV42 579 aa7.91□□□□□ -1.14
MARK3-212ENST00000558223 FKBP1CQ5VVH2 108 aa7.91□□□□□ -1.14
MARK3-212ENST00000558223 KRT79Q5XKE5 535 aa7.91□□□□□ -1.14
MARK3-212ENST00000558223 MAP1SQ66K74 1059 aaPredicted RBP7.91□□□□□ -1.14
MARK3-212ENST00000558223 HEATR6Q6AI08 1181 aaKnown RBP7.91□□□□□ -1.14
MARK3-212ENST00000558223 APOBEC3HQ6NTF7 200 aaKnown RBP7.91□□□□□ -1.14
MARK3-212ENST00000558223 CDC42EP5Q6NZY7 148 aa7.91□□□□□ -1.14
MARK3-212ENST00000558223 TATDN1Q6P1N9 297 aa7.91□□□□□ -1.14
MARK3-212ENST00000558223 ARHGAP27Q6ZUM4 889 aa7.91□□□□□ -1.14
MARK3-212ENST00000558223 CABP7Q86V35 215 aa7.91□□□□□ -1.14
MARK3-212ENST00000558223 SUGP1Q8IWZ8 645 aaKnown RBP7.91□□□□□ -1.14
MARK3-212ENST00000558223 CCDC155Q8N6L0 562 aa7.91□□□□□ -1.14
MARK3-212ENST00000558223 GMCL1P1Q8NEA9 526 aa7.91□□□□□ -1.14
MARK3-212ENST00000558223 POF1BQ8WVV4 589 aa7.91□□□□□ -1.14
MARK3-212ENST00000558223 ZNF622Q969S3 477 aaKnown RBP eCLIP7.91□□□□□ -1.148e-8■□□□□ 10.1
MARK3-212ENST00000558223 SHISA4Q96DD7 197 aa7.91□□□□□ -1.14
MARK3-212ENST00000558223 AHCYL2Q96HN2 611 aaKnown RBP7.91□□□□□ -1.14
MARK3-212ENST00000558223 DHRS1Q96LJ7 313 aa7.91□□□□□ -1.14
MARK3-212ENST00000558223 NSUN5Q96P11 429 aaKnown RBP7.91□□□□□ -1.14
MARK3-212ENST00000558223 BAG1Q99933 345 aaPredicted RBP7.91□□□□□ -1.14
MARK3-212ENST00000558223 HSD3B7Q9H2F3 369 aa7.91□□□□□ -1.14
MARK3-212ENST00000558223 TIMMDC1Q9NPL8 285 aa7.91□□□□□ -1.14
MARK3-212ENST00000558223 FAM86C1Q9NVL1 165 aa7.91□□□□□ -1.14
MARK3-212ENST00000558223 KLHL3Q9UH77 587 aa7.91□□□□□ -1.14
MARK3-212ENST00000558223 HERC5Q9UII4 1024 aaKnown RBP7.91□□□□□ -1.14
MARK3-212ENST00000558223 MRFAP1Q9Y605 127 aa7.91□□□□□ -1.14
MARK3-212ENST00000558223 ABCB11O95342 1321 aa7.91□□□□□ -1.14
MARK3-212ENST00000558223 KDM3AQ9Y4C1 1321 aa7.91□□□□□ -1.14
MARK3-212ENST00000558223 SNED1Q8TER0 1413 aa7.91□□□□□ -1.14
MARK3-212ENST00000558223 MYH2Q9UKX2 1941 aa7.91□□□□□ -1.14
MARK3-212ENST00000558223 CASZ1Q86V15 1759 aa7.9□□□□□ -1.14
MARK3-212ENST00000558223 PHLPP2Q6ZVD8 1323 aa7.9□□□□□ -1.14
MARK3-212ENST00000558223 A0A1W2PQC6 194 aa7.9□□□□□ -1.14
MARK3-212ENST00000558223 hCG_1642624A0A1W2PR95 340 aa7.9□□□□□ -1.14
MARK3-212ENST00000558223 SMIM22K7EJ46 135 aa7.9□□□□□ -1.14
MARK3-212ENST00000558223 CCNT1O60563 726 aaKnown RBP7.9□□□□□ -1.14
MARK3-212ENST00000558223 FKBP9O95302 570 aa7.9□□□□□ -1.14
MARK3-212ENST00000558223 CFBP00751 764 aa7.9□□□□□ -1.14
MARK3-212ENST00000558223 RAG1P15918 1043 aa7.9□□□□□ -1.14
MARK3-212ENST00000558223 NFKB1P19838 968 aa7.9□□□□□ -1.14
MARK3-212ENST00000558223 CALRP27797 417 aaKnown RBP7.9□□□□□ -1.14
MARK3-212ENST00000558223 ETF1P62495 437 aaKnown RBP7.9□□□□□ -1.14
MARK3-212ENST00000558223 KRT76Q01546 638 aa7.9□□□□□ -1.14
MARK3-212ENST00000558223 ZNF252P-AS1Q0IIN9 211 aa7.9□□□□□ -1.14
MARK3-212ENST00000558223 KCNMA1Q12791 1236 aa7.9□□□□□ -1.14
MARK3-212ENST00000558223 KLF1Q13351 362 aaPredicted RBP7.9□□□□□ -1.14
MARK3-212ENST00000558223 SUZ12Q15022 739 aaKnown RBP7.9□□□□□ -1.14
MARK3-212ENST00000558223 ELF2Q15723 593 aa7.9□□□□□ -1.14
MARK3-212ENST00000558223 CALCRLQ16602 461 aa7.9□□□□□ -1.14
MARK3-212ENST00000558223 LONRF1Q17RB8 773 aa7.9□□□□□ -1.14
MARK3-212ENST00000558223 LETM2Q2VYF4 491 aa7.9□□□□□ -1.14
MARK3-212ENST00000558223 CERKLQ49MI3 558 aaPredicted RBP7.9□□□□□ -1.14
MARK3-212ENST00000558223 ATP13A4Q4VNC1 1196 aa7.9□□□□□ -1.14
MARK3-212ENST00000558223 CCDC93Q567U6 631 aa7.9□□□□□ -1.14
MARK3-212ENST00000558223 WDR44Q5JSH3 913 aa7.9□□□□□ -1.14
MARK3-212ENST00000558223 WIPI1Q5MNZ9 446 aaPredicted RBP7.9□□□□□ -1.14
MARK3-212ENST00000558223 DACT2Q5SW24 774 aa7.9□□□□□ -1.14
MARK3-212ENST00000558223 ISM2Q6H9L7 571 aa7.9□□□□□ -1.14
MARK3-212ENST00000558223 ARMCX5Q6P1M9 558 aa7.9□□□□□ -1.14
MARK3-212ENST00000558223 PGM2L1Q6PCE3 622 aa7.9□□□□□ -1.14
MARK3-212ENST00000558223 FKBP9P1Q75LS8 142 aa7.9□□□□□ -1.14
MARK3-212ENST00000558223 MAATS1Q7Z4T9 603 aa7.9□□□□□ -1.14
MARK3-212ENST00000558223 ZNF227Q86WZ6 799 aa7.9□□□□□ -1.14
MARK3-212ENST00000558223 TMTC1Q8IUR5 882 aa7.9□□□□□ -1.14
MARK3-212ENST00000558223 SLFN12Q8IYM2 578 aa7.9□□□□□ -1.14
MARK3-212ENST00000558223 ADSSL1Q8N142 457 aa7.9□□□□□ -1.14
MARK3-212ENST00000558223 IGSF22Q8N9C0 903 aa7.9□□□□□ -1.14
MARK3-212ENST00000558223 SLC44A5Q8NCS7 719 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms