RNA–Protein interactions for RNA: ENST00000558036.5

SNRPA1-205, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,108 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-205ENST00000558036 IFNLR1Q8IU57 520 aaPredicted RBP22.13■■□□□ 1.13
SNRPA1-205ENST00000558036 THNSL1Q8IYQ7 743 aa22.13■■□□□ 1.13
SNRPA1-205ENST00000558036 TAS1R2Q8TE23 839 aa22.13■■□□□ 1.13
SNRPA1-205ENST00000558036 SEMA4DQ92854 862 aa22.13■■□□□ 1.13
SNRPA1-205ENST00000558036 MTG1Q9BT17 334 aaPredicted RBP22.13■■□□□ 1.13
SNRPA1-205ENST00000558036 ADAMTS10Q9H324 1103 aa22.13■■□□□ 1.13
SNRPA1-205ENST00000558036 TMEM8AQ9HCN3 771 aa22.13■■□□□ 1.13
SNRPA1-205ENST00000558036 APEX2Q9UBZ4 518 aa22.13■■□□□ 1.13
SNRPA1-205ENST00000558036 CASP8AP2Q9UKL3 1982 aa22.13■■□□□ 1.13
SNRPA1-205ENST00000558036 SMIM35A0A1B0GVV1 85 aa22.12■■□□□ 1.13
SNRPA1-205ENST00000558036 TNNI1P19237 187 aa22.12■■□□□ 1.13
SNRPA1-205ENST00000558036 HGSNATQ68CP4 663 aa22.12■■□□□ 1.13
SNRPA1-205ENST00000558036 FNBP1Q96RU3 617 aa22.12■■□□□ 1.13
SNRPA1-205ENST00000558036 ZSCAN12O43309 604 aa22.12■■□□□ 1.13
SNRPA1-205ENST00000558036 FKTNO75072 461 aa22.12■■□□□ 1.13
SNRPA1-205ENST00000558036 GPR32O75388 356 aa22.12■■□□□ 1.13
SNRPA1-205ENST00000558036 ARF4P18085 180 aaPredicted RBP22.12■■□□□ 1.13
SNRPA1-205ENST00000558036 CETN1Q12798 172 aa22.12■■□□□ 1.13
SNRPA1-205ENST00000558036 NBPF20Q3BBV1 942 aa22.12■■□□□ 1.13
SNRPA1-205ENST00000558036 MAP3K21Q5TCX8 1036 aa22.12■■□□□ 1.13
SNRPA1-205ENST00000558036 USP37Q86T82 979 aa22.12■■□□□ 1.13
SNRPA1-205ENST00000558036 OSMRQ99650 979 aa22.12■■□□□ 1.13
SNRPA1-205ENST00000558036 DNAJC12Q9UKB3 198 aa22.12■■□□□ 1.13
SNRPA1-205ENST00000558036 TNFSF13BQ9Y275 285 aa22.12■■□□□ 1.13
SNRPA1-205ENST00000558036 REXO2Q9Y3B8 237 aaKnown RBP22.12■■□□□ 1.13
SNRPA1-205ENST00000558036 CNTNAP2Q9UHC6 1331 aa22.11■■□□□ 1.13
SNRPA1-205ENST00000558036 KAT6AQ92794 2004 aa22.11■■□□□ 1.13
SNRPA1-205ENST00000558036 OGTO15294 1046 aa22.11■■□□□ 1.13
SNRPA1-205ENST00000558036 EIF4A3P38919 411 aaKnown RBP22.11■■□□□ 1.13
SNRPA1-205ENST00000558036 CDK17Q00537 523 aa22.11■■□□□ 1.13
SNRPA1-205ENST00000558036 KCNA10Q16322 511 aa22.11■■□□□ 1.13
SNRPA1-205ENST00000558036 NYAP1Q6ZVC0 841 aa22.11■■□□□ 1.13
SNRPA1-205ENST00000558036 ARHGEF19Q8IW93 802 aa22.11■■□□□ 1.13
SNRPA1-205ENST00000558036 TMEM192Q8IY95 271 aa22.11■■□□□ 1.13
SNRPA1-205ENST00000558036 FAM212AQ96EL1 285 aa22.11■■□□□ 1.13
SNRPA1-205ENST00000558036 ERO1AQ96HE7 468 aa22.11■■□□□ 1.13
SNRPA1-205ENST00000558036 CDT1Q9H211 546 aa22.11■■□□□ 1.13
SNRPA1-205ENST00000558036 P4HA2O15460 535 aa22.1■■□□□ 1.13
SNRPA1-205ENST00000558036 ASGR1P07306 291 aa22.1■■□□□ 1.13
SNRPA1-205ENST00000558036 JAM2P57087 298 aa22.1■■□□□ 1.13
SNRPA1-205ENST00000558036 FAM187BQ17R55 369 aa22.1■■□□□ 1.13
SNRPA1-205ENST00000558036 TDRD12Q587J7 1177 aaKnown RBP22.1■■□□□ 1.13
SNRPA1-205ENST00000558036 ZNF410Q86VK4 478 aa22.1■■□□□ 1.13
SNRPA1-205ENST00000558036 CCDC42Q96M95 316 aa22.1■■□□□ 1.13
SNRPA1-205ENST00000558036 PDZD7Q9H5P4 517 aa22.1■■□□□ 1.13
SNRPA1-205ENST00000558036 FBXL5Q9UKA1 691 aa22.1■■□□□ 1.13
SNRPA1-205ENST00000558036 TFR2Q9UP52 801 aa22.1■■□□□ 1.13
SNRPA1-205ENST00000558036 TSPAN1O60635 241 aa22.1■■□□□ 1.13
SNRPA1-205ENST00000558036 KPNA6O60684 536 aa22.1■■□□□ 1.13
SNRPA1-205ENST00000558036 TNNT1P13805 278 aa22.1■■□□□ 1.13
SNRPA1-205ENST00000558036 CYP27A1Q02318 531 aa22.1■■□□□ 1.13
SNRPA1-205ENST00000558036 PTPN14Q15678 1187 aa22.1■■□□□ 1.13
SNRPA1-205ENST00000558036 ARHGAP44Q17R89 818 aa22.1■■□□□ 1.13
SNRPA1-205ENST00000558036 FAM47CQ5HY64 1035 aa22.1■■□□□ 1.13
SNRPA1-205ENST00000558036 NUCKS1Q9H1E3 243 aaKnown RBP22.1■■□□□ 1.13
SNRPA1-205ENST00000558036 LZTFL1Q9NQ48 299 aa22.1■■□□□ 1.13
SNRPA1-205ENST00000558036 ERLIN2O94905 339 aa22.09■■□□□ 1.13
SNRPA1-205ENST00000558036 ABL1P00519 1130 aa22.09■■□□□ 1.13
SNRPA1-205ENST00000558036 HOXC8P31273 242 aa22.09■■□□□ 1.13
SNRPA1-205ENST00000558036 CLDN10P78369 228 aa22.09■■□□□ 1.13
SNRPA1-205ENST00000558036 SYN2Q92777 582 aaPredicted RBP22.09■■□□□ 1.13
SNRPA1-205ENST00000558036 PI4K2AQ9BTU6 479 aa22.09■■□□□ 1.13
SNRPA1-205ENST00000558036 UBE2TQ9NPD8 197 aaPredicted RBP22.09■■□□□ 1.13
SNRPA1-205ENST00000558036 AIPL1Q9NZN9 384 aa22.09■■□□□ 1.13
SNRPA1-205ENST00000558036 CPSF3Q9UKF6 684 aaKnown RBP22.09■■□□□ 1.13
SNRPA1-205ENST00000558036 CCP110O43303 1012 aa22.09■■□□□ 1.13
SNRPA1-205ENST00000558036 INHAP05111 366 aa22.09■■□□□ 1.13
SNRPA1-205ENST00000558036 DRAP1Q14919 205 aaPredicted RBP22.09■■□□□ 1.13
SNRPA1-205ENST00000558036 ASIC2Q16515 512 aa22.09■■□□□ 1.13
SNRPA1-205ENST00000558036 TDRD10Q5VZ19 366 aaKnown RBP22.09■■□□□ 1.13
SNRPA1-205ENST00000558036 SCARA3Q6AZY7 606 aa22.09■■□□□ 1.13
SNRPA1-205ENST00000558036 BRSK2Q8IWQ3 736 aa22.09■■□□□ 1.13
SNRPA1-205ENST00000558036 FBXL13Q8NEE6 735 aa22.09■■□□□ 1.13
SNRPA1-205ENST00000558036 OR5B17Q8NGF7 314 aa22.09■■□□□ 1.13
SNRPA1-205ENST00000558036 TMEM40Q8WWA1 233 aa22.09■■□□□ 1.13
SNRPA1-205ENST00000558036 KAT5Q92993 513 aa22.09■■□□□ 1.13
SNRPA1-205ENST00000558036 PRIMPOLQ96LW4 560 aa22.09■■□□□ 1.13
SNRPA1-205ENST00000558036 GPR88Q9GZN0 384 aa22.09■■□□□ 1.13
SNRPA1-205ENST00000558036 DEF6Q9H4E7 631 aa22.09■■□□□ 1.13
SNRPA1-205ENST00000558036 RAB20Q9NX57 234 aa22.09■■□□□ 1.13
SNRPA1-205ENST00000558036 DDX20Q9UHI6 824 aaKnown RBP22.09■■□□□ 1.13
SNRPA1-205ENST00000558036 F8VZ95 297 aa22.08■■□□□ 1.13
SNRPA1-205ENST00000558036 ZNF263O14978 683 aa22.08■■□□□ 1.13
SNRPA1-205ENST00000558036 PMM2O15305 246 aa22.08■■□□□ 1.13
SNRPA1-205ENST00000558036 OFD1O75665 1012 aa22.08■■□□□ 1.13
SNRPA1-205ENST00000558036 GTF2H1P32780 548 aa22.08■■□□□ 1.13
SNRPA1-205ENST00000558036 SLC9C1Q4G0N8 1177 aa22.08■■□□□ 1.13
SNRPA1-205ENST00000558036 GDF6Q6KF10 455 aaPredicted RBP22.08■■□□□ 1.13
SNRPA1-205ENST00000558036 IRF2BP2Q7Z5L9 587 aa22.08■■□□□ 1.13
SNRPA1-205ENST00000558036 SRGAP1Q7Z6B7 1085 aa22.08■■□□□ 1.13
SNRPA1-205ENST00000558036 KLHDC9Q8NEP7 349 aa22.08■■□□□ 1.13
SNRPA1-205ENST00000558036 PXYLP1Q8TE99 480 aa22.08■■□□□ 1.13
SNRPA1-205ENST00000558036 GCOM2Q9BZD3 368 aaPredicted RBP22.08■■□□□ 1.13
SNRPA1-205ENST00000558036 COQ4Q9Y3A0 265 aa22.08■■□□□ 1.13
SNRPA1-205ENST00000558036 GFPT2O94808 682 aa22.07■■□□□ 1.12
SNRPA1-205ENST00000558036 SERPING1P05155 500 aa22.07■■□□□ 1.12
SNRPA1-205ENST00000558036 GNAT1P11488 350 aa22.07■■□□□ 1.12
SNRPA1-205ENST00000558036 CYLC1P35663 651 aaPredicted RBP22.07■■□□□ 1.12
SNRPA1-205ENST00000558036 KIF11P52732 1056 aa22.07■■□□□ 1.12
SNRPA1-205ENST00000558036 NKX3-2P78367 333 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms