RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 WNT16Q9UBV4 365 aa17.66■□□□□ 0.42
SCFD1-224ENST00000557713 FBXL21Q9UKT6 434 aa17.66■□□□□ 0.42
SCFD1-224ENST00000557713 PRR23AA6NEV1 266 aa17.65■□□□□ 0.42
SCFD1-224ENST00000557713 TTLL13PA6NNM8 815 aa17.65■□□□□ 0.42
SCFD1-224ENST00000557713 RPL17P18621 184 aaKnown RBP17.65■□□□□ 0.42
SCFD1-224ENST00000557713 ATP2B1P20020 1258 aa17.65■□□□□ 0.42
SCFD1-224ENST00000557713 FOSBP53539 338 aa17.65■□□□□ 0.42
SCFD1-224ENST00000557713 CREMQ03060 361 aa17.65■□□□□ 0.42
SCFD1-224ENST00000557713 TRIM29Q14134 588 aa17.65■□□□□ 0.42
SCFD1-224ENST00000557713 HSP90AA2PQ14568 343 aaPredicted RBP17.65■□□□□ 0.42
SCFD1-224ENST00000557713 RTP2Q5QGT7 225 aa17.65■□□□□ 0.42
SCFD1-224ENST00000557713 GLYCTKQ8IVS8 523 aa17.65■□□□□ 0.42
SCFD1-224ENST00000557713 CCDC105Q8IYK2 499 aa17.65■□□□□ 0.42
SCFD1-224ENST00000557713 NACC1Q96RE7 527 aa17.65■□□□□ 0.42
SCFD1-224ENST00000557713 POLR3CQ9BUI4 534 aaPredicted RBP17.65■□□□□ 0.42
SCFD1-224ENST00000557713 PIDD1Q9HB75 910 aa17.65■□□□□ 0.42
SCFD1-224ENST00000557713 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.65■□□□□ 0.42
SCFD1-224ENST00000557713 CACNG4Q9UBN1 327 aa17.65■□□□□ 0.42
SCFD1-224ENST00000557713 KRBA1A5PL33 1030 aa17.64■□□□□ 0.41
SCFD1-224ENST00000557713 PTGESO14684 152 aa17.64■□□□□ 0.41
SCFD1-224ENST00000557713 ZMYND10O75800 440 aa17.64■□□□□ 0.41
SCFD1-224ENST00000557713 CFHP08603 1231 aa17.64■□□□□ 0.41
SCFD1-224ENST00000557713 LAMP2P13473 410 aa17.64■□□□□ 0.41
SCFD1-224ENST00000557713 MCM7P33993 719 aa17.64■□□□□ 0.41
SCFD1-224ENST00000557713 NEK4P51957 841 aa17.64■□□□□ 0.41
SCFD1-224ENST00000557713 ST3GAL1Q11201 340 aa17.64■□□□□ 0.41
SCFD1-224ENST00000557713 TUSC3Q13454 348 aa17.64■□□□□ 0.41
SCFD1-224ENST00000557713 NAB2Q15742 525 aa17.64■□□□□ 0.41
SCFD1-224ENST00000557713 PRSS55Q6UWB4 352 aaPredicted RBP17.64■□□□□ 0.41
SCFD1-224ENST00000557713 FRMD5Q7Z6J6 570 aa17.64■□□□□ 0.41
SCFD1-224ENST00000557713 ZBTB8OSQ8IWT0 167 aa17.64■□□□□ 0.41
SCFD1-224ENST00000557713 DTWD2Q8NBA8 298 aa17.64■□□□□ 0.41
SCFD1-224ENST00000557713 BSNDQ8WZ55 320 aa17.64■□□□□ 0.41
SCFD1-224ENST00000557713 CXCL16Q9H2A7 254 aa17.64■□□□□ 0.41
SCFD1-224ENST00000557713 PDZD7Q9H5P4 517 aa17.64■□□□□ 0.41
SCFD1-224ENST00000557713 SNTG2Q9NY99 539 aa17.64■□□□□ 0.41
SCFD1-224ENST00000557713 MTCL1Q9Y4B5 1905 aaKnown RBP17.63■□□□□ 0.41
SCFD1-224ENST00000557713 ANHXE9PGG2 379 aa17.63■□□□□ 0.41
SCFD1-224ENST00000557713 N4BP3O15049 544 aa17.63■□□□□ 0.41
SCFD1-224ENST00000557713 LNX1Q8TBB1 728 aaPredicted RBP17.63■□□□□ 0.41
SCFD1-224ENST00000557713 CLSTN3Q9BQT9 956 aa17.63■□□□□ 0.41
SCFD1-224ENST00000557713 CCDC113Q9H0I3 377 aa17.63■□□□□ 0.41
SCFD1-224ENST00000557713 C2orf40Q9H1Z8 148 aa17.63■□□□□ 0.41
SCFD1-224ENST00000557713 SF3B1O75533 1304 aaKnown RBP eCLIP17.63■□□□□ 0.414e-8■■■■■ 68.9
SCFD1-224ENST00000557713 CFAP54Q96N23 3096 aa17.62■□□□□ 0.41
SCFD1-224ENST00000557713 ACKR2O00590 384 aa17.62■□□□□ 0.41
SCFD1-224ENST00000557713 EDN1P05305 212 aa17.62■□□□□ 0.41
SCFD1-224ENST00000557713 THP07101 528 aa17.62■□□□□ 0.41
SCFD1-224ENST00000557713 SRFP11831 508 aa17.62■□□□□ 0.41
SCFD1-224ENST00000557713 CYP11B2P19099 503 aa17.62■□□□□ 0.41
SCFD1-224ENST00000557713 RPA1P27694 616 aa17.62■□□□□ 0.41
SCFD1-224ENST00000557713 GUCY1B3Q02153 619 aa17.62■□□□□ 0.41
SCFD1-224ENST00000557713 PRPF4BQ13523 1007 aaKnown RBP17.62■□□□□ 0.41
SCFD1-224ENST00000557713 ANGPT1Q15389 498 aa17.62■□□□□ 0.41
SCFD1-224ENST00000557713 FAM171A1Q5VUB5 890 aa17.62■□□□□ 0.41
SCFD1-224ENST00000557713 PADI6Q6TGC4 694 aa17.62■□□□□ 0.41
SCFD1-224ENST00000557713 PIK3R5Q8WYR1 880 aa17.62■□□□□ 0.41
SCFD1-224ENST00000557713 NKD2Q969F2 451 aaPredicted RBP17.62■□□□□ 0.41
SCFD1-224ENST00000557713 TTPALQ9BTX7 342 aa17.62■□□□□ 0.41
SCFD1-224ENST00000557713 FBXW11Q9UKB1 542 aa17.62■□□□□ 0.41
SCFD1-224ENST00000557713 USP20Q9Y2K6 914 aa17.62■□□□□ 0.41
SCFD1-224ENST00000557713 CASTOR2A6NHX0 329 aa17.61■□□□□ 0.41
SCFD1-224ENST00000557713 KIF4AO95239 1232 aa17.61■□□□□ 0.41
SCFD1-224ENST00000557713 NAMPTP43490 491 aa17.61■□□□□ 0.41
SCFD1-224ENST00000557713 HTR4Q13639 388 aa17.61■□□□□ 0.41
SCFD1-224ENST00000557713 MAPK6Q16659 721 aa17.61■□□□□ 0.41
SCFD1-224ENST00000557713 NOSTRINQ8IVI9 506 aa17.61■□□□□ 0.41
SCFD1-224ENST00000557713 HASPINQ8TF76 798 aa17.61■□□□□ 0.41
SCFD1-224ENST00000557713 RECQL4O94761 1208 aa17.6■□□□□ 0.41
SCFD1-224ENST00000557713 PRKCBP05771 671 aa17.6■□□□□ 0.41
SCFD1-224ENST00000557713 MUTP22033 750 aa17.6■□□□□ 0.41
SCFD1-224ENST00000557713 ORC2Q13416 577 aaPredicted RBP17.6■□□□□ 0.41
SCFD1-224ENST00000557713 SAFBQ15424 915 aaKnown RBP eCLIP17.6■□□□□ 0.41
SCFD1-224ENST00000557713 ZNF174Q15697 407 aa17.6■□□□□ 0.41
SCFD1-224ENST00000557713 PSMD5Q16401 504 aa17.6■□□□□ 0.41
SCFD1-224ENST00000557713 EEF1DP3Q658K8 133 aa17.6■□□□□ 0.41
SCFD1-224ENST00000557713 GET4Q7L5D6 327 aaPredicted RBP17.6■□□□□ 0.41
SCFD1-224ENST00000557713 CEP57Q86XR8 500 aa17.6■□□□□ 0.41
SCFD1-224ENST00000557713 ERMNQ8TAM6 284 aa17.6■□□□□ 0.41
SCFD1-224ENST00000557713 GPR152Q8TDT2 470 aa17.6■□□□□ 0.41
SCFD1-224ENST00000557713 SNX27Q96L92 541 aa17.6■□□□□ 0.41
SCFD1-224ENST00000557713 CA14Q9ULX7 337 aa17.6■□□□□ 0.41
SCFD1-224ENST00000557713 ZFP37Q9Y6Q3 630 aaPredicted RBP17.6■□□□□ 0.41
SCFD1-224ENST00000557713 ARHGEF35A5YM69 484 aa17.59■□□□□ 0.41
SCFD1-224ENST00000557713 STK25O00506 426 aa17.59■□□□□ 0.41
SCFD1-224ENST00000557713 ADAM12O43184 909 aa17.59■□□□□ 0.41
SCFD1-224ENST00000557713 HNRNPA1P09651 372 aaKnown RBP eCLIP17.59■□□□□ 0.41
SCFD1-224ENST00000557713 OR52Z1P0C646 297 aa17.59■□□□□ 0.41
SCFD1-224ENST00000557713 FSHRP23945 695 aa17.59■□□□□ 0.41
SCFD1-224ENST00000557713 ECM1Q16610 540 aa17.59■□□□□ 0.41
SCFD1-224ENST00000557713 PHLDB3Q6NSJ2 640 aa17.59■□□□□ 0.41
SCFD1-224ENST00000557713 GRASPQ7Z6J2 395 aaPredicted RBP17.59■□□□□ 0.41
SCFD1-224ENST00000557713 DEPTORQ8TB45 409 aa17.59■□□□□ 0.41
SCFD1-224ENST00000557713 ADPGKQ9BRR6 497 aa17.59■□□□□ 0.41
SCFD1-224ENST00000557713 FOXP1Q9H334 677 aaPredicted RBP17.59■□□□□ 0.41
SCFD1-224ENST00000557713 POLD4Q9HCU8 107 aa17.59■□□□□ 0.41
SCFD1-224ENST00000557713 SLC2A4RGQ9NR83 387 aa17.59■□□□□ 0.41
SCFD1-224ENST00000557713 DAXXQ9UER7 740 aaPredicted RBP17.59■□□□□ 0.41
SCFD1-224ENST00000557713 NUMBLQ9Y6R0 609 aa17.59■□□□□ 0.41
SCFD1-224ENST00000557713 DOCK8Q8NF50 2099 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms