RNA–Protein interactions for RNA: ENST00000557673.5

NEK9-211, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-211ENST00000557673 RNF149Q8NC42 400 aa18.37■□□□□ 0.53
NEK9-211ENST00000557673 NXPE3Q969Y0 559 aa18.37■□□□□ 0.53
NEK9-211ENST00000557673 CCDC51Q96ER9 411 aa18.37■□□□□ 0.53
NEK9-211ENST00000557673 HERC2P3Q9BVR0 1158 aa18.37■□□□□ 0.53
NEK9-211ENST00000557673 WDR6Q9NNW5 1121 aaKnown RBP18.37■□□□□ 0.53
NEK9-211ENST00000557673 TUFT1Q9NNX1 390 aa18.37■□□□□ 0.53
NEK9-211ENST00000557673 WNT16Q9UBV4 365 aa18.37■□□□□ 0.53
NEK9-211ENST00000557673 FBXO2Q9UK22 296 aaPredicted RBP18.37■□□□□ 0.53
NEK9-211ENST00000557673 CIZ1Q9ULV3 898 aaPredicted RBP18.37■□□□□ 0.53
NEK9-211ENST00000557673 SPTBN4Q9H254 2564 aa18.37■□□□□ 0.53
NEK9-211ENST00000557673 PLXNA3P51805 1871 aa18.37■□□□□ 0.53
NEK9-211ENST00000557673 DGAT1O75907 488 aa18.36■□□□□ 0.53
NEK9-211ENST00000557673 GLUD1P00367 558 aa18.36■□□□□ 0.53
NEK9-211ENST00000557673 NPR3P17342 541 aa18.36■□□□□ 0.53
NEK9-211ENST00000557673 RFX1P22670 979 aa18.36■□□□□ 0.53
NEK9-211ENST00000557673 OR1G1P47890 313 aa18.36■□□□□ 0.53
NEK9-211ENST00000557673 GLUD2P49448 558 aa18.36■□□□□ 0.53
NEK9-211ENST00000557673 AFF1P51825 1210 aaKnown RBP18.36■□□□□ 0.53
NEK9-211ENST00000557673 DNM1Q05193 864 aaKnown RBP18.36■□□□□ 0.53
NEK9-211ENST00000557673 GRIN1Q05586 938 aa18.36■□□□□ 0.53
NEK9-211ENST00000557673 MXD4Q14582 209 aaPredicted RBP18.36■□□□□ 0.53
NEK9-211ENST00000557673 SLC39A14Q15043 492 aa18.36■□□□□ 0.53
NEK9-211ENST00000557673 STK38Q15208 465 aa18.36■□□□□ 0.53
NEK9-211ENST00000557673 UBXN11Q5T124 520 aa18.36■□□□□ 0.53
NEK9-211ENST00000557673 NOTUMQ6P988 496 aa18.36■□□□□ 0.53
NEK9-211ENST00000557673 POTEGQ6S5H5 508 aa18.36■□□□□ 0.53
NEK9-211ENST00000557673 HACE1Q8IYU2 909 aa18.36■□□□□ 0.53
NEK9-211ENST00000557673 DTWD2Q8NBA8 298 aa18.36■□□□□ 0.53
NEK9-211ENST00000557673 LINC00301Q8NCQ3 95 aa18.36■□□□□ 0.53
NEK9-211ENST00000557673 SNX29Q8TEQ0 813 aa18.36■□□□□ 0.53
NEK9-211ENST00000557673 HDAC7Q8WUI4 952 aa18.36■□□□□ 0.53
NEK9-211ENST00000557673 POLR3CQ9BUI4 534 aaPredicted RBP18.36■□□□□ 0.53
NEK9-211ENST00000557673 PRG3Q9Y2Y8 225 aaPredicted RBP18.36■□□□□ 0.53
NEK9-211ENST00000557673 STK25O00506 426 aa18.35■□□□□ 0.53
NEK9-211ENST00000557673 INPPL1O15357 1258 aa18.35■□□□□ 0.53
NEK9-211ENST00000557673 TEX28O15482 410 aa18.35■□□□□ 0.53
NEK9-211ENST00000557673 USO1O60763 962 aaKnown RBP18.35■□□□□ 0.53
NEK9-211ENST00000557673 RPA1P27694 616 aa18.35■□□□□ 0.53
NEK9-211ENST00000557673 MARCKSP29966 332 aaPredicted RBP18.35■□□□□ 0.53
NEK9-211ENST00000557673 GBP2P32456 591 aaPredicted RBP18.35■□□□□ 0.53
NEK9-211ENST00000557673 ANGPT1Q15389 498 aa18.35■□□□□ 0.53
NEK9-211ENST00000557673 COLGALT2Q8IYK4 626 aa18.35■□□□□ 0.53
NEK9-211ENST00000557673 ASAP3Q8TDY4 903 aa18.35■□□□□ 0.53
NEK9-211ENST00000557673 AK8Q96MA6 479 aa18.35■□□□□ 0.53
NEK9-211ENST00000557673 MMTAG2Q9BU76 263 aaKnown RBP18.35■□□□□ 0.53
NEK9-211ENST00000557673 COLEC11Q9BWP8 271 aa18.35■□□□□ 0.53
NEK9-211ENST00000557673 SEMA4AQ9H3S1 761 aa18.35■□□□□ 0.53
NEK9-211ENST00000557673 PLEKHA4Q9H4M7 779 aa18.35■□□□□ 0.53
NEK9-211ENST00000557673 TFIP11Q9UBB9 837 aaKnown RBP18.35■□□□□ 0.53
NEK9-211ENST00000557673 EPS15L1Q9UBC2 864 aa18.35■□□□□ 0.53
NEK9-211ENST00000557673 IPPQ9Y573 584 aa18.35■□□□□ 0.53
NEK9-211ENST00000557673 ATP6V1DQ9Y5K8 247 aa18.35■□□□□ 0.53
NEK9-211ENST00000557673 STK24Q9Y6E0 443 aa18.35■□□□□ 0.53
NEK9-211ENST00000557673 CLUHO75153 1309 aa18.34■□□□□ 0.53
NEK9-211ENST00000557673 ARL5CA6NH57 179 aa18.34■□□□□ 0.53
NEK9-211ENST00000557673 PI15O43692 258 aa18.34■□□□□ 0.53
NEK9-211ENST00000557673 MUTP22033 750 aa18.34■□□□□ 0.53
NEK9-211ENST00000557673 ARL2P36404 184 aa18.34■□□□□ 0.53
NEK9-211ENST00000557673 LONP1P36776 959 aaKnown RBP18.34■□□□□ 0.53
NEK9-211ENST00000557673 CCT6AP40227 531 aaKnown RBP18.34■□□□□ 0.53
NEK9-211ENST00000557673 POU5F1BQ06416 359 aa18.34■□□□□ 0.53
NEK9-211ENST00000557673 TFDP1Q14186 410 aa18.34■□□□□ 0.53
NEK9-211ENST00000557673 KIAA0319Q5VV43 1072 aa18.34■□□□□ 0.53
NEK9-211ENST00000557673 ERMP1Q7Z2K6 904 aa18.34■□□□□ 0.53
NEK9-211ENST00000557673 GPR65Q8IYL9 337 aa18.34■□□□□ 0.53
NEK9-211ENST00000557673 ADSSL1Q8N142 457 aa18.34■□□□□ 0.53
NEK9-211ENST00000557673 SMG8Q8ND04 991 aaKnown RBP18.34■□□□□ 0.53
NEK9-211ENST00000557673 CHAMP1Q96JM3 812 aa18.34■□□□□ 0.53
NEK9-211ENST00000557673 TRIM6Q9C030 488 aaPredicted RBP18.34■□□□□ 0.53
NEK9-211ENST00000557673 POLR3FQ9H1D9 316 aaPredicted RBP18.34■□□□□ 0.53
NEK9-211ENST00000557673 RXFP1Q9HBX9 757 aa18.34■□□□□ 0.53
NEK9-211ENST00000557673 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.34■□□□□ 0.53
NEK9-211ENST00000557673 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.34■□□□□ 0.53
NEK9-211ENST00000557673 GIT1Q9Y2X7 761 aa18.34■□□□□ 0.53
NEK9-211ENST00000557673 SRPRBQ9Y5M8 271 aaKnown RBP18.34■□□□□ 0.53
NEK9-211ENST00000557673 DENND4AQ7Z401 1863 aa18.34■□□□□ 0.53
NEK9-211ENST00000557673 SPTLC2O15270 562 aa18.33■□□□□ 0.52
NEK9-211ENST00000557673 XRCC6P12956 609 aaKnown RBP eCLIP18.33■□□□□ 0.52
NEK9-211ENST00000557673 GLRA2P23416 452 aa18.33■□□□□ 0.52
NEK9-211ENST00000557673 CDC25AP30304 524 aa18.33■□□□□ 0.52
NEK9-211ENST00000557673 PTENP60484 403 aa18.33■□□□□ 0.52
NEK9-211ENST00000557673 DSG1Q02413 1049 aa18.33■□□□□ 0.52
NEK9-211ENST00000557673 CREMQ03060 361 aa18.33■□□□□ 0.52
NEK9-211ENST00000557673 DSC1Q08554 894 aa18.33■□□□□ 0.52
NEK9-211ENST00000557673 CAPSQ13938 189 aa18.33■□□□□ 0.52
NEK9-211ENST00000557673 KRT79Q5XKE5 535 aa18.33■□□□□ 0.52
NEK9-211ENST00000557673 MAEAQ7L5Y9 396 aa18.33■□□□□ 0.52
NEK9-211ENST00000557673 TAS1R1Q7RTX1 841 aa18.33■□□□□ 0.52
NEK9-211ENST00000557673 KRI1Q8N9T8 703 aaKnown RBP18.33■□□□□ 0.52
NEK9-211ENST00000557673 FEZF2Q8TBJ5 459 aa18.33■□□□□ 0.52
NEK9-211ENST00000557673 KCNG4Q8TDN1 519 aa18.33■□□□□ 0.52
NEK9-211ENST00000557673 SMG7Q92540 1137 aaKnown RBP18.33■□□□□ 0.52
NEK9-211ENST00000557673 NACC1Q96RE7 527 aa18.33■□□□□ 0.52
NEK9-211ENST00000557673 GAD1Q99259 594 aa18.33■□□□□ 0.52
NEK9-211ENST00000557673 CSRNP2Q9H175 543 aa18.33■□□□□ 0.52
NEK9-211ENST00000557673 PIDD1Q9HB75 910 aa18.33■□□□□ 0.52
NEK9-211ENST00000557673 GPRC5CQ9NQ84 441 aa18.33■□□□□ 0.52
NEK9-211ENST00000557673 MARCH5Q9NX47 278 aa18.33■□□□□ 0.52
NEK9-211ENST00000557673 DMDP11532 3685 aa18.33■□□□□ 0.52
NEK9-211ENST00000557673 TSPAN1O60635 241 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms