RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 MOV10L1Q9BXT6 1211 aaKnown RBP12.65□□□□□ -0.39
VIPAS39-211ENST00000557658 TRIM6Q9C030 488 aaPredicted RBP12.65□□□□□ -0.39
VIPAS39-211ENST00000557658 MLXIPLQ9NP71 852 aa12.65□□□□□ -0.39
VIPAS39-211ENST00000557658 KLHL14Q9P2G3 628 aa12.65□□□□□ -0.39
VIPAS39-211ENST00000557658 PI4KBQ9UBF8 816 aa12.65□□□□□ -0.39
VIPAS39-211ENST00000557658 PRKAG3Q9UGI9 489 aa12.65□□□□□ -0.39
VIPAS39-211ENST00000557658 LTBP1Q14766 1721 aa12.64□□□□□ -0.39
VIPAS39-211ENST00000557658 SIPA1L1O43166 1804 aa12.64□□□□□ -0.39
VIPAS39-211ENST00000557658 THAP12O43422 761 aa12.64□□□□□ -0.39
VIPAS39-211ENST00000557658 TCEA3O75764 348 aa12.64□□□□□ -0.39
VIPAS39-211ENST00000557658 PAX7P23759 505 aa12.64□□□□□ -0.39
VIPAS39-211ENST00000557658 CHKAP35790 457 aa12.64□□□□□ -0.39
VIPAS39-211ENST00000557658 RASA3Q14644 834 aa12.64□□□□□ -0.39
VIPAS39-211ENST00000557658 ZKSCAN8Q15776 578 aaPredicted RBP12.64□□□□□ -0.39
VIPAS39-211ENST00000557658 KIRREL3Q8IZU9 778 aa12.64□□□□□ -0.39
VIPAS39-211ENST00000557658 FITM2Q8N6M3 262 aa12.64□□□□□ -0.39
VIPAS39-211ENST00000557658 GRK7Q8WTQ7 553 aa12.64□□□□□ -0.39
VIPAS39-211ENST00000557658 MAGEB18Q96M61 343 aa12.64□□□□□ -0.39
VIPAS39-211ENST00000557658 WDR11Q9BZH6 1224 aa12.64□□□□□ -0.39
VIPAS39-211ENST00000557658 ZC3H12CQ9C0D7 883 aaKnown RBP12.64□□□□□ -0.39
VIPAS39-211ENST00000557658 NKIRAS1Q9NYS0 192 aa12.64□□□□□ -0.39
VIPAS39-211ENST00000557658 STK38LQ9Y2H1 464 aa12.64□□□□□ -0.39
VIPAS39-211ENST00000557658 RBBP6Q7Z6E9 1792 aaKnown RBP12.64□□□□□ -0.39
VIPAS39-211ENST00000557658 TP73O15350 636 aa12.64□□□□□ -0.39
VIPAS39-211ENST00000557658 DIAPH2O60879 1101 aa12.64□□□□□ -0.39
VIPAS39-211ENST00000557658 ECM2O94769 699 aaPredicted RBP12.64□□□□□ -0.39
VIPAS39-211ENST00000557658 PDE6BP35913 854 aa12.64□□□□□ -0.39
VIPAS39-211ENST00000557658 SKIV2L2P42285 1042 aaKnown RBP12.64□□□□□ -0.39
VIPAS39-211ENST00000557658 MXI1P50539 228 aa12.64□□□□□ -0.39
VIPAS39-211ENST00000557658 ATP11AP98196 1134 aa12.64□□□□□ -0.39
VIPAS39-211ENST00000557658 TCP10Q12799 353 aa12.64□□□□□ -0.39
VIPAS39-211ENST00000557658 TRAF1Q13077 416 aa12.64□□□□□ -0.39
VIPAS39-211ENST00000557658 ALCAMQ13740 583 aa12.64□□□□□ -0.39
VIPAS39-211ENST00000557658 PTK6Q13882 451 aa12.64□□□□□ -0.39
VIPAS39-211ENST00000557658 KYNUQ16719 465 aa12.64□□□□□ -0.39
VIPAS39-211ENST00000557658 RNF43Q68DV7 783 aa12.64□□□□□ -0.39
VIPAS39-211ENST00000557658 ASRGL1Q7L266 308 aa12.64□□□□□ -0.39
VIPAS39-211ENST00000557658 SP8Q8IXZ3 490 aa12.64□□□□□ -0.39
VIPAS39-211ENST00000557658 PSPC1Q8WXF1 523 aaKnown RBP12.64□□□□□ -0.39
VIPAS39-211ENST00000557658 PRCCQ92733 491 aaPredicted RBP12.64□□□□□ -0.39
VIPAS39-211ENST00000557658 KAT5Q92993 513 aa12.64□□□□□ -0.39
VIPAS39-211ENST00000557658 GRAMD1AQ96CP6 724 aa12.64□□□□□ -0.39
VIPAS39-211ENST00000557658 CTNNAL1Q9UBT7 734 aa12.64□□□□□ -0.39
VIPAS39-211ENST00000557658 PNMA3Q9UL41 463 aa12.64□□□□□ -0.39
VIPAS39-211ENST00000557658 CYP26A1O43174 497 aa12.63□□□□□ -0.39
VIPAS39-211ENST00000557658 NEBLO76041 1014 aa12.63□□□□□ -0.39
VIPAS39-211ENST00000557658 GAS8O95995 478 aa12.63□□□□□ -0.39
VIPAS39-211ENST00000557658 ITGA8P53708 1063 aa12.63□□□□□ -0.39
VIPAS39-211ENST00000557658 MFAP3P55082 362 aa12.63□□□□□ -0.39
VIPAS39-211ENST00000557658 FMO1Q01740 532 aa12.63□□□□□ -0.39
VIPAS39-211ENST00000557658 STRN3Q13033 797 aa12.63□□□□□ -0.39
VIPAS39-211ENST00000557658 SNX1Q13596 522 aa12.63□□□□□ -0.39
VIPAS39-211ENST00000557658 C12orf56Q8IXR9 622 aa12.63□□□□□ -0.39
VIPAS39-211ENST00000557658 C7orf43Q8WVR3 580 aa12.63□□□□□ -0.39
VIPAS39-211ENST00000557658 FAXDC2Q96IV6 333 aa12.63□□□□□ -0.39
VIPAS39-211ENST00000557658 ACCSQ96QU6 501 aa12.63□□□□□ -0.39
VIPAS39-211ENST00000557658 LARSQ9P2J5 1176 aaKnown RBP12.63□□□□□ -0.39
VIPAS39-211ENST00000557658 WRAP73Q9P2S5 460 aaPredicted RBP12.63□□□□□ -0.39
VIPAS39-211ENST00000557658 LGALS13Q9UHV8 139 aa12.63□□□□□ -0.39
VIPAS39-211ENST00000557658 LRRC37AA6NMS7 1700 aa12.63□□□□□ -0.39
VIPAS39-211ENST00000557658 SMCHD1A6NHR9 2005 aa12.63□□□□□ -0.39
VIPAS39-211ENST00000557658 DDTLA6NHG4 134 aaPredicted RBP12.63□□□□□ -0.39
VIPAS39-211ENST00000557658 PPEF1O14829 653 aaPredicted RBP12.63□□□□□ -0.39
VIPAS39-211ENST00000557658 CFBP00751 764 aa12.63□□□□□ -0.39
VIPAS39-211ENST00000557658 GH1P01241 217 aa12.63□□□□□ -0.39
VIPAS39-211ENST00000557658 ATF2P15336 505 aa12.63□□□□□ -0.39
VIPAS39-211ENST00000557658 CRKP46108 304 aa12.63□□□□□ -0.39
VIPAS39-211ENST00000557658 CCDC15Q0P6D6 951 aa12.63□□□□□ -0.39
VIPAS39-211ENST00000557658 MTFR1Q15390 333 aa12.63□□□□□ -0.39
VIPAS39-211ENST00000557658 ABCB5Q2M3G0 1257 aa12.63□□□□□ -0.39
VIPAS39-211ENST00000557658 TATDN1Q6P1N9 297 aa12.63□□□□□ -0.39
VIPAS39-211ENST00000557658 NSMFQ6X4W1 530 aa12.63□□□□□ -0.39
VIPAS39-211ENST00000557658 PPP1R21Q6ZMI0 780 aa12.63□□□□□ -0.39
VIPAS39-211ENST00000557658 SLC47A2Q86VL8 602 aa12.63□□□□□ -0.39
VIPAS39-211ENST00000557658 ADGRA3Q8IWK6 1321 aa12.63□□□□□ -0.39
VIPAS39-211ENST00000557658 DAW1Q8N136 415 aa12.63□□□□□ -0.39
VIPAS39-211ENST00000557658 PPM1KQ8N3J5 372 aa12.63□□□□□ -0.39
VIPAS39-211ENST00000557658 XXYLT1Q8NBI6 393 aa12.63□□□□□ -0.39
VIPAS39-211ENST00000557658 FBF1Q8TES7 1133 aa12.63□□□□□ -0.39
VIPAS39-211ENST00000557658 TMEM174Q8WUU8 243 aa12.63□□□□□ -0.39
VIPAS39-211ENST00000557658 FAM212AQ96EL1 285 aa12.63□□□□□ -0.39
VIPAS39-211ENST00000557658 RAB3IPQ96QF0 476 aaPredicted RBP12.63□□□□□ -0.39
VIPAS39-211ENST00000557658 CCDC77Q9BR77 488 aa12.63□□□□□ -0.39
VIPAS39-211ENST00000557658 LXNQ9BS40 222 aa12.63□□□□□ -0.39
VIPAS39-211ENST00000557658 TRAIPQ9BWF2 469 aa12.63□□□□□ -0.39
VIPAS39-211ENST00000557658 UNC45AQ9H3U1 944 aa12.63□□□□□ -0.39
VIPAS39-211ENST00000557658 ANAPC5Q9UJX4 755 aa12.63□□□□□ -0.39
VIPAS39-211ENST00000557658 USP20Q9Y2K6 914 aa12.63□□□□□ -0.39
VIPAS39-211ENST00000557658 A8MUI8 341 aa12.62□□□□□ -0.39
VIPAS39-211ENST00000557658 PMM2O15305 246 aa12.62□□□□□ -0.39
VIPAS39-211ENST00000557658 CDH16O75309 829 aa12.62□□□□□ -0.39
VIPAS39-211ENST00000557658 GDF11O95390 407 aa12.62□□□□□ -0.39
VIPAS39-211ENST00000557658 MAPTP10636 758 aaKnown RBP12.62□□□□□ -0.39
VIPAS39-211ENST00000557658 CCNB1P14635 433 aa12.62□□□□□ -0.39
VIPAS39-211ENST00000557658 ACVR2BQ13705 512 aa12.62□□□□□ -0.39
VIPAS39-211ENST00000557658 MPP2Q14168 576 aa12.62□□□□□ -0.39
VIPAS39-211ENST00000557658 LLGL1Q15334 1064 aa12.62□□□□□ -0.39
VIPAS39-211ENST00000557658 C1orf220Q5T0J3 134 aa12.62□□□□□ -0.39
VIPAS39-211ENST00000557658 BZW1Q7L1Q6 419 aaKnown RBP12.62□□□□□ -0.39
VIPAS39-211ENST00000557658 RMDN2Q96LZ7 410 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms