RNA–Protein interactions for RNA: ENST00000557490.5

TUBB3-214, Transcript of tubulin beta 3 class III, humanhuman

TSL 5

Gene TUBB3, Length 806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-214ENST00000557490 TCHPQ9BT92 498 aa17.41■□□□□ 0.38
TUBB3-214ENST00000557490 TLR9Q9NR96 1032 aa17.41■□□□□ 0.38
TUBB3-214ENST00000557490 SNTG2Q9NY99 539 aa17.41■□□□□ 0.38
TUBB3-214ENST00000557490 FAM13BQ9NYF5 915 aa17.41■□□□□ 0.38
TUBB3-214ENST00000557490 KLK14Q9P0G3 267 aa17.41■□□□□ 0.38
TUBB3-214ENST00000557490 GRXCR2A6NFK2 248 aa17.4■□□□□ 0.38
TUBB3-214ENST00000557490 NT5C1B-RDH14C9J2C7 533 aa17.4■□□□□ 0.38
TUBB3-214ENST00000557490 K7ENM7 598 aa17.4■□□□□ 0.38
TUBB3-214ENST00000557490 NCK2O43639 380 aa17.4■□□□□ 0.38
TUBB3-214ENST00000557490 DDHD2O94830 711 aa17.4■□□□□ 0.38
TUBB3-214ENST00000557490 ALDH2P05091 517 aa17.4■□□□□ 0.38
TUBB3-214ENST00000557490 ABCD1P33897 745 aa17.4■□□□□ 0.38
TUBB3-214ENST00000557490 SLC11A1P49279 550 aa17.4■□□□□ 0.38
TUBB3-214ENST00000557490 IQUBQ8NA54 791 aa17.4■□□□□ 0.38
TUBB3-214ENST00000557490 PRSS33Q8NF86 280 aa17.4■□□□□ 0.38
TUBB3-214ENST00000557490 BICD1Q96G01 975 aa17.4■□□□□ 0.38
TUBB3-214ENST00000557490 SPATA32Q96LK8 384 aa17.4■□□□□ 0.38
TUBB3-214ENST00000557490 LRRC27Q9C0I9 530 aa17.4■□□□□ 0.38
TUBB3-214ENST00000557490 CUEDC2Q9H467 287 aa17.4■□□□□ 0.38
TUBB3-214ENST00000557490 DNAJB4Q9UDY4 337 aa17.4■□□□□ 0.38
TUBB3-214ENST00000557490 FAN1Q9Y2M0 1017 aa17.4■□□□□ 0.38
TUBB3-214ENST00000557490 GDAQ9Y2T3 454 aa17.4■□□□□ 0.38
TUBB3-214ENST00000557490 MYH15Q9Y2K3 1946 aa17.39■□□□□ 0.37
TUBB3-214ENST00000557490 RIF1Q5UIP0 2472 aaKnown RBP17.39■□□□□ 0.37
TUBB3-214ENST00000557490 MYMKA6NI61 221 aa17.39■□□□□ 0.37
TUBB3-214ENST00000557490 NR1I2O75469 434 aa17.39■□□□□ 0.37
TUBB3-214ENST00000557490 RECQL4O94761 1208 aa17.39■□□□□ 0.37
TUBB3-214ENST00000557490 GAP43P17677 238 aa17.39■□□□□ 0.37
TUBB3-214ENST00000557490 IRS1P35568 1242 aa17.39■□□□□ 0.37
TUBB3-214ENST00000557490 NUCB2P80303 420 aa17.39■□□□□ 0.37
TUBB3-214ENST00000557490 GRIK3Q13003 919 aa17.39■□□□□ 0.37
TUBB3-214ENST00000557490 BMS1Q14692 1282 aaKnown RBP17.39■□□□□ 0.37
TUBB3-214ENST00000557490 MPZL3Q6UWV2 235 aa17.39■□□□□ 0.37
TUBB3-214ENST00000557490 ZPBP2Q6X784 338 aa17.39■□□□□ 0.37
TUBB3-214ENST00000557490 ZBTB33Q86T24 672 aa17.39■□□□□ 0.37
TUBB3-214ENST00000557490 KCNN1Q92952 543 aa17.39■□□□□ 0.37
TUBB3-214ENST00000557490 DHX58Q96C10 678 aa17.39■□□□□ 0.37
TUBB3-214ENST00000557490 IGSF21Q96ID5 467 aa17.39■□□□□ 0.37
TUBB3-214ENST00000557490 MFSD14AQ96MC6 490 aa17.39■□□□□ 0.37
TUBB3-214ENST00000557490 CCDC94Q9BW85 323 aaPredicted RBP17.39■□□□□ 0.37
TUBB3-214ENST00000557490 CDT1Q9H211 546 aa17.39■□□□□ 0.37
TUBB3-214ENST00000557490 PTPRHQ9HD43 1115 aa17.39■□□□□ 0.37
TUBB3-214ENST00000557490 ENTPD7Q9NQZ7 604 aa17.39■□□□□ 0.37
TUBB3-214ENST00000557490 MIOSQ9NXC5 875 aa17.39■□□□□ 0.37
TUBB3-214ENST00000557490 KIAA1671Q9BY89 1806 aa17.39■□□□□ 0.37
TUBB3-214ENST00000557490 B4GALT3O60512 393 aa17.38■□□□□ 0.37
TUBB3-214ENST00000557490 TOM1L1O75674 476 aa17.38■□□□□ 0.37
TUBB3-214ENST00000557490 MCF2P10911 925 aa17.38■□□□□ 0.37
TUBB3-214ENST00000557490 MATR3P43243 847 aaKnown RBP eCLIP17.38■□□□□ 0.37
TUBB3-214ENST00000557490 YARSP54577 528 aaKnown RBP17.38■□□□□ 0.37
TUBB3-214ENST00000557490 ERVFC1P60507 584 aa17.38■□□□□ 0.37
TUBB3-214ENST00000557490 AMPD3Q01432 767 aa17.38■□□□□ 0.37
TUBB3-214ENST00000557490 RESP18Q5W5W9 173 aa17.38■□□□□ 0.37
TUBB3-214ENST00000557490 SFR1Q86XK3 245 aa17.38■□□□□ 0.37
TUBB3-214ENST00000557490 COLGALT2Q8IYK4 626 aa17.38■□□□□ 0.37
TUBB3-214ENST00000557490 LEO1Q8WVC0 666 aaPredicted RBP17.38■□□□□ 0.37
TUBB3-214ENST00000557490 TCF25Q9BQ70 676 aa17.38■□□□□ 0.37
TUBB3-214ENST00000557490 PYM1Q9BRP8 204 aaKnown RBP17.38■□□□□ 0.37
TUBB3-214ENST00000557490 TNMDQ9H2S6 317 aa17.38■□□□□ 0.37
TUBB3-214ENST00000557490 NGRNQ9NPE2 291 aaKnown RBP17.38■□□□□ 0.37
TUBB3-214ENST00000557490 ANKFY1Q9P2R3 1169 aa17.38■□□□□ 0.37
TUBB3-214ENST00000557490 SEL1LQ9UBV2 794 aa17.38■□□□□ 0.37
TUBB3-214ENST00000557490 TBX20Q9UMR3 447 aa17.38■□□□□ 0.37
TUBB3-214ENST00000557490 NRP1O14786 923 aa17.37■□□□□ 0.37
TUBB3-214ENST00000557490 FSCN2O14926 492 aa17.37■□□□□ 0.37
TUBB3-214ENST00000557490 POLR2DO15514 142 aaKnown RBP17.37■□□□□ 0.37
TUBB3-214ENST00000557490 HARSP12081 509 aaKnown RBP17.37■□□□□ 0.37
TUBB3-214ENST00000557490 IDEP14735 1019 aa17.37■□□□□ 0.37
TUBB3-214ENST00000557490 PROZP22891 400 aa17.37■□□□□ 0.37
TUBB3-214ENST00000557490 NMT1P30419 496 aaKnown RBP17.37■□□□□ 0.37
TUBB3-214ENST00000557490 GRM5P41594 1212 aa17.37■□□□□ 0.37
TUBB3-214ENST00000557490 OR1G1P47890 313 aa17.37■□□□□ 0.37
TUBB3-214ENST00000557490 LIG4P49917 911 aa17.37■□□□□ 0.37
TUBB3-214ENST00000557490 DSC1Q08554 894 aa17.37■□□□□ 0.37
TUBB3-214ENST00000557490 HYAL1Q12794 435 aa17.37■□□□□ 0.37
TUBB3-214ENST00000557490 E2F4Q16254 413 aa17.37■□□□□ 0.37
TUBB3-214ENST00000557490 PLPP4Q5VZY2 271 aa17.37■□□□□ 0.37
TUBB3-214ENST00000557490 EP400NLQ6ZTU2 488 aa17.37■□□□□ 0.37
TUBB3-214ENST00000557490 TMC7Q7Z402 723 aa17.37■□□□□ 0.37
TUBB3-214ENST00000557490 DDX53Q86TM3 631 aaKnown RBP17.37■□□□□ 0.37
TUBB3-214ENST00000557490 TMEM173Q86WV6 379 aaPredicted RBP17.37■□□□□ 0.37
TUBB3-214ENST00000557490 GSTCDQ8NEC7 633 aa17.37■□□□□ 0.37
TUBB3-214ENST00000557490 DNAJC19Q96DA6 116 aa17.37■□□□□ 0.37
TUBB3-214ENST00000557490 PABPC5Q96DU9 382 aaKnown RBP17.37■□□□□ 0.37
TUBB3-214ENST00000557490 SCAND2PQ9GZW5 306 aaPredicted RBP17.37■□□□□ 0.37
TUBB3-214ENST00000557490 IGFLR1Q9H665 355 aa17.37■□□□□ 0.37
TUBB3-214ENST00000557490 TLE6Q9H808 572 aa17.37■□□□□ 0.37
TUBB3-214ENST00000557490 TOPORSQ9NS56 1045 aaPredicted RBP17.37■□□□□ 0.37
TUBB3-214ENST00000557490 STK39Q9UEW8 545 aa17.37■□□□□ 0.37
TUBB3-214ENST00000557490 PRG3Q9Y2Y8 225 aaPredicted RBP17.37■□□□□ 0.37
TUBB3-214ENST00000557490 PCDHGC5Q9Y5F6 944 aa17.37■□□□□ 0.37
TUBB3-214ENST00000557490 CLDN3O15551 220 aa17.36■□□□□ 0.37
TUBB3-214ENST00000557490 THP07101 528 aa17.36■□□□□ 0.37
TUBB3-214ENST00000557490 PTPN5P54829 565 aa17.36■□□□□ 0.37
TUBB3-214ENST00000557490 OSTNP61366 133 aa17.36■□□□□ 0.37
TUBB3-214ENST00000557490 GTF2BQ00403 316 aa17.36■□□□□ 0.37
TUBB3-214ENST00000557490 ZP2Q05996 745 aa17.36■□□□□ 0.37
TUBB3-214ENST00000557490 SMC1AQ14683 1233 aaKnown RBP17.36■□□□□ 0.37
TUBB3-214ENST00000557490 NOLC1Q14978 699 aaKnown RBP eCLIP17.36■□□□□ 0.37
TUBB3-214ENST00000557490 HERC4Q5GLZ8 1057 aaPredicted RBP17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms