RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 NHLH1Q02575 133 aa15.63■□□□□ 0.09
SNX6-210ENST00000557341 CREMQ03060 361 aa15.63■□□□□ 0.09
SNX6-210ENST00000557341 TUSC3Q13454 348 aa15.63■□□□□ 0.09
SNX6-210ENST00000557341 PDIA5Q14554 519 aa15.63■□□□□ 0.09
SNX6-210ENST00000557341 DCAF4L1Q3SXM0 396 aa15.63■□□□□ 0.09
SNX6-210ENST00000557341 KIAA0319Q5VV43 1072 aa15.63■□□□□ 0.09
SNX6-210ENST00000557341 UBALD2Q8IYN6 164 aa15.63■□□□□ 0.09
SNX6-210ENST00000557341 CMASQ8NFW8 434 aaPredicted RBP15.63■□□□□ 0.09
SNX6-210ENST00000557341 ACSF2Q96CM8 615 aaPredicted RBP15.63■□□□□ 0.09
SNX6-210ENST00000557341 KIFC3Q9BVG8 833 aa15.63■□□□□ 0.09
SNX6-210ENST00000557341 RXFP1Q9HBX9 757 aa15.63■□□□□ 0.09
SNX6-210ENST00000557341 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.63■□□□□ 0.09
SNX6-210ENST00000557341 CHST7Q9NS84 486 aa15.63■□□□□ 0.09
SNX6-210ENST00000557341 DAXXQ9UER7 740 aaPredicted RBP15.63■□□□□ 0.09
SNX6-210ENST00000557341 DOCK6Q96HP0 2047 aa15.63■□□□□ 0.09
SNX6-210ENST00000557341 PHLPP2Q6ZVD8 1323 aa15.63■□□□□ 0.09
SNX6-210ENST00000557341 EDN1P05305 212 aa15.62■□□□□ 0.09
SNX6-210ENST00000557341 PRPHP41219 470 aa15.62■□□□□ 0.09
SNX6-210ENST00000557341 HSP90AA2PQ14568 343 aaPredicted RBP15.62■□□□□ 0.09
SNX6-210ENST00000557341 USP41Q3LFD5 358 aa15.62■□□□□ 0.09
SNX6-210ENST00000557341 KRT79Q5XKE5 535 aa15.62■□□□□ 0.09
SNX6-210ENST00000557341 GPR65Q8IYL9 337 aa15.62■□□□□ 0.09
SNX6-210ENST00000557341 FEZF2Q8TBJ5 459 aa15.62■□□□□ 0.09
SNX6-210ENST00000557341 PRRX2Q99811 253 aa15.62■□□□□ 0.09
SNX6-210ENST00000557341 GPR62Q9BZJ7 368 aa15.62■□□□□ 0.09
SNX6-210ENST00000557341 UPF2Q9HAU5 1272 aaKnown RBP15.62■□□□□ 0.09
SNX6-210ENST00000557341 SNTG2Q9NY99 539 aa15.62■□□□□ 0.09
SNX6-210ENST00000557341 CASTOR2A6NHX0 329 aa15.61■□□□□ 0.09
SNX6-210ENST00000557341 PTGESO14684 152 aa15.61■□□□□ 0.09
SNX6-210ENST00000557341 TADA2AO75478 443 aa15.61■□□□□ 0.09
SNX6-210ENST00000557341 BRD1O95696 1058 aa15.61■□□□□ 0.09
SNX6-210ENST00000557341 THP07101 528 aa15.61■□□□□ 0.09
SNX6-210ENST00000557341 RILPL1Q5EBL4 403 aa15.61■□□□□ 0.09
SNX6-210ENST00000557341 MCTP1Q6DN14 999 aa15.61■□□□□ 0.09
SNX6-210ENST00000557341 OTOP3Q7RTS5 596 aa15.61■□□□□ 0.09
SNX6-210ENST00000557341 APBB1IPQ7Z5R6 666 aaPredicted RBP15.61■□□□□ 0.09
SNX6-210ENST00000557341 RABGGTAQ92696 567 aa15.61■□□□□ 0.09
SNX6-210ENST00000557341 B3GALT6Q96L58 329 aa15.61■□□□□ 0.09
SNX6-210ENST00000557341 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.61■□□□□ 0.09
SNX6-210ENST00000557341 FNIP2Q9P278 1114 aa15.61■□□□□ 0.09
SNX6-210ENST00000557341 CACNG4Q9UBN1 327 aa15.61■□□□□ 0.09
SNX6-210ENST00000557341 PP2D1A8MPX8 630 aa15.6■□□□□ 0.09
SNX6-210ENST00000557341 KIF4AO95239 1232 aa15.6■□□□□ 0.09
SNX6-210ENST00000557341 C1RP00736 705 aa15.6■□□□□ 0.09
SNX6-210ENST00000557341 ASGR2P07307 311 aa15.6■□□□□ 0.09
SNX6-210ENST00000557341 DMP1Q13316 513 aaPredicted RBP15.6■□□□□ 0.09
SNX6-210ENST00000557341 ATF7IP2Q5U623 682 aa15.6■□□□□ 0.09
SNX6-210ENST00000557341 EEF1DP3Q658K8 133 aa15.6■□□□□ 0.09
SNX6-210ENST00000557341 CYP26C1Q6V0L0 522 aa15.6■□□□□ 0.09
SNX6-210ENST00000557341 DTHD1Q6ZMT9 781 aa15.6■□□□□ 0.09
SNX6-210ENST00000557341 HASPINQ8TF76 798 aa15.6■□□□□ 0.09
SNX6-210ENST00000557341 HDAC7Q8WUI4 952 aa15.6■□□□□ 0.09
SNX6-210ENST00000557341 RIN2Q8WYP3 895 aaPredicted RBP15.6■□□□□ 0.09
SNX6-210ENST00000557341 DRC1Q96MC2 740 aa15.6■□□□□ 0.09
SNX6-210ENST00000557341 PAAF1Q9BRP4 392 aa15.6■□□□□ 0.09
SNX6-210ENST00000557341 RHOBTB2Q9BYZ6 727 aa15.6■□□□□ 0.09
SNX6-210ENST00000557341 PLEKHA4Q9H4M7 779 aa15.6■□□□□ 0.09
SNX6-210ENST00000557341 DNM3Q9UQ16 869 aa15.6■□□□□ 0.09
SNX6-210ENST00000557341 USP20Q9Y2K6 914 aa15.6■□□□□ 0.09
SNX6-210ENST00000557341 GDAQ9Y2T3 454 aa15.6■□□□□ 0.09
SNX6-210ENST00000557341 USP34Q70CQ2 3546 aa15.59■□□□□ 0.09
SNX6-210ENST00000557341 CCDC195A0A1B0GUA6 201 aa15.59■□□□□ 0.09
SNX6-210ENST00000557341 E9PMD0 336 aa15.59■□□□□ 0.09
SNX6-210ENST00000557341 K7ERI5 159 aa15.59■□□□□ 0.09
SNX6-210ENST00000557341 PTPN5P54829 565 aa15.59■□□□□ 0.09
SNX6-210ENST00000557341 VCPP55072 806 aaKnown RBP15.59■□□□□ 0.09
SNX6-210ENST00000557341 PEX3P56589 373 aa15.59■□□□□ 0.09
SNX6-210ENST00000557341 RTP2Q5QGT7 225 aa15.59■□□□□ 0.09
SNX6-210ENST00000557341 PALB2Q86YC2 1186 aa15.59■□□□□ 0.09
SNX6-210ENST00000557341 GLYCTKQ8IVS8 523 aa15.59■□□□□ 0.09
SNX6-210ENST00000557341 PRSS33Q8NF86 280 aa15.59■□□□□ 0.09
SNX6-210ENST00000557341 STAMQ92783 540 aa15.59■□□□□ 0.09
SNX6-210ENST00000557341 TMX3Q96JJ7 454 aa15.59■□□□□ 0.09
SNX6-210ENST00000557341 POLD4Q9HCU8 107 aa15.59■□□□□ 0.09
SNX6-210ENST00000557341 ZDHHC7Q9NXF8 308 aa15.59■□□□□ 0.09
SNX6-210ENST00000557341 LIMD1Q9UGP4 676 aa15.59■□□□□ 0.09
SNX6-210ENST00000557341 CLUHO75153 1309 aa15.59■□□□□ 0.09
SNX6-210ENST00000557341 ANK1P16157 1881 aa15.59■□□□□ 0.09
SNX6-210ENST00000557341 CCDC169A6NNP5 214 aa15.58■□□□□ 0.08
SNX6-210ENST00000557341 H3BQV1 296 aa15.58■□□□□ 0.08
SNX6-210ENST00000557341 TGM5O43548 720 aa15.58■□□□□ 0.08
SNX6-210ENST00000557341 HIP1RO75146 1068 aa15.58■□□□□ 0.08
SNX6-210ENST00000557341 RFPL2O75678 378 aa15.58■□□□□ 0.08
SNX6-210ENST00000557341 GJB2P29033 226 aa15.58■□□□□ 0.08
SNX6-210ENST00000557341 CDC25AP30304 524 aa15.58■□□□□ 0.08
SNX6-210ENST00000557341 NPTX2P47972 431 aa15.58■□□□□ 0.08
SNX6-210ENST00000557341 ATP2C1P98194 919 aaPredicted RBP15.58■□□□□ 0.08
SNX6-210ENST00000557341 ELAVL2Q12926 359 aaKnown RBP15.58■□□□□ 0.08
SNX6-210ENST00000557341 NAB2Q15742 525 aa15.58■□□□□ 0.08
SNX6-210ENST00000557341 IL17AQ16552 155 aa15.58■□□□□ 0.08
SNX6-210ENST00000557341 IER5LQ5T953 404 aa15.58■□□□□ 0.08
SNX6-210ENST00000557341 NT5DC1Q5TFE4 455 aa15.58■□□□□ 0.08
SNX6-210ENST00000557341 SMG7Q92540 1137 aaKnown RBP15.58■□□□□ 0.08
SNX6-210ENST00000557341 TTPALQ9BTX7 342 aa15.58■□□□□ 0.08
SNX6-210ENST00000557341 RUSC1Q9BVN2 902 aa15.58■□□□□ 0.08
SNX6-210ENST00000557341 SMOC2Q9H3U7 446 aa15.58■□□□□ 0.08
SNX6-210ENST00000557341 WDR6Q9NNW5 1121 aaKnown RBP15.58■□□□□ 0.08
SNX6-210ENST00000557341 TNFSF13BQ9Y275 285 aa15.58■□□□□ 0.08
SNX6-210ENST00000557341 MIA3Q5JRA6 1907 aa15.58■□□□□ 0.08
SNX6-210ENST00000557341 PAPLNO95428 1278 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms