RNA–Protein interactions for RNA: ENST00000557285.1

VSX1-207, Transcript of visual system homeobox 1, humanhuman

TSL 3

Gene VSX1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-207ENST00000557285 SOD2P04179 222 aa18.18■□□□□ 0.5
VSX1-207ENST00000557285 KRT18P05783 430 aaKnown RBP18.18■□□□□ 0.5
VSX1-207ENST00000557285 HSP90AA1P07900 732 aaKnown RBP18.18■□□□□ 0.5
VSX1-207ENST00000557285 WEE2P0C1S8 567 aa18.18■□□□□ 0.5
VSX1-207ENST00000557285 PLS3P13797 630 aa18.18■□□□□ 0.5
VSX1-207ENST00000557285 KLRC2P26717 231 aa18.18■□□□□ 0.5
VSX1-207ENST00000557285 GIT2Q14161 759 aa18.18■□□□□ 0.5
VSX1-207ENST00000557285 ARSHQ5FYA8 562 aa18.18■□□□□ 0.5
VSX1-207ENST00000557285 RARS2Q5T160 578 aaKnown RBP18.18■□□□□ 0.5
VSX1-207ENST00000557285 KIAA1841Q6NSI8 718 aa18.18■□□□□ 0.5
VSX1-207ENST00000557285 TMEM184AQ6ZMB5 413 aa18.18■□□□□ 0.5
VSX1-207ENST00000557285 TAS1R3Q7RTX0 852 aa18.18■□□□□ 0.5
VSX1-207ENST00000557285 APBB1IPQ7Z5R6 666 aaPredicted RBP18.18■□□□□ 0.5
VSX1-207ENST00000557285 CEP120Q8N960 986 aa18.18■□□□□ 0.5
VSX1-207ENST00000557285 CLIC6Q96NY7 704 aa18.18■□□□□ 0.5
VSX1-207ENST00000557285 ACO2Q99798 780 aaKnown RBP18.18■□□□□ 0.5
VSX1-207ENST00000557285 TCHPQ9BT92 498 aa18.18■□□□□ 0.5
VSX1-207ENST00000557285 HERC2P3Q9BVR0 1158 aa18.18■□□□□ 0.5
VSX1-207ENST00000557285 TIPINQ9BVW5 301 aa18.18■□□□□ 0.5
VSX1-207ENST00000557285 EMILIN2Q9BXX0 1053 aa18.18■□□□□ 0.5
VSX1-207ENST00000557285 ARHGAP28Q9P2N2 729 aa18.18■□□□□ 0.5
VSX1-207ENST00000557285 STX6O43752 255 aa18.17■□□□□ 0.5
VSX1-207ENST00000557285 TADA2AO75478 443 aa18.17■□□□□ 0.5
VSX1-207ENST00000557285 THP07101 528 aa18.17■□□□□ 0.5
VSX1-207ENST00000557285 CNPP09543 421 aaKnown RBP18.17■□□□□ 0.5
VSX1-207ENST00000557285 STRN3Q13033 797 aa18.17■□□□□ 0.5
VSX1-207ENST00000557285 CBX2Q14781 532 aaPredicted RBP18.17■□□□□ 0.5
VSX1-207ENST00000557285 PTPAQ15257 358 aa18.17■□□□□ 0.5
VSX1-207ENST00000557285 TPRNQ4KMQ1 711 aa18.17■□□□□ 0.5
VSX1-207ENST00000557285 USP49Q70CQ1 688 aa18.17■□□□□ 0.5
VSX1-207ENST00000557285 SPRYD3Q8NCJ5 442 aa18.17■□□□□ 0.5
VSX1-207ENST00000557285 EPSTI1Q96J88 318 aa18.17■□□□□ 0.5
VSX1-207ENST00000557285 KLHL5Q96PQ7 755 aa18.17■□□□□ 0.5
VSX1-207ENST00000557285 REEP2Q9BRK0 252 aa18.17■□□□□ 0.5
VSX1-207ENST00000557285 CDT1Q9H211 546 aa18.17■□□□□ 0.5
VSX1-207ENST00000557285 S1PR5Q9H228 398 aa18.17■□□□□ 0.5
VSX1-207ENST00000557285 TMEM134Q9H6X4 195 aa18.17■□□□□ 0.5
VSX1-207ENST00000557285 C17orf75Q9HAS0 396 aa18.17■□□□□ 0.5
VSX1-207ENST00000557285 TSHZ2Q9NRE2 1034 aa18.17■□□□□ 0.5
VSX1-207ENST00000557285 ANKFY1Q9P2R3 1169 aa18.17■□□□□ 0.5
VSX1-207ENST00000557285 TNFSF13BQ9Y275 285 aa18.17■□□□□ 0.5
VSX1-207ENST00000557285 RBM19Q9Y4C8 960 aaKnown RBP18.17■□□□□ 0.5
VSX1-207ENST00000557285 C19orf67A6NJJ6 358 aa18.16■□□□□ 0.5
VSX1-207ENST00000557285 MATR3P43243 847 aaKnown RBP eCLIP18.16■□□□□ 0.5
VSX1-207ENST00000557285 GLUD2P49448 558 aa18.16■□□□□ 0.5
VSX1-207ENST00000557285 SMTNP53814 917 aa18.16■□□□□ 0.5
VSX1-207ENST00000557285 TUSC3Q13454 348 aa18.16■□□□□ 0.5
VSX1-207ENST00000557285 HSP90AA2PQ14568 343 aaPredicted RBP18.16■□□□□ 0.5
VSX1-207ENST00000557285 FUT10Q6P4F1 479 aa18.16■□□□□ 0.5
VSX1-207ENST00000557285 GLYCTKQ8IVS8 523 aa18.16■□□□□ 0.5
VSX1-207ENST00000557285 RAD54LQ92698 747 aa18.16■□□□□ 0.5
VSX1-207ENST00000557285 BICD1Q96G01 975 aa18.16■□□□□ 0.5
VSX1-207ENST00000557285 ZBTB45Q96K62 511 aaPredicted RBP18.16■□□□□ 0.5
VSX1-207ENST00000557285 CCDC94Q9BW85 323 aaPredicted RBP18.16■□□□□ 0.5
VSX1-207ENST00000557285 C1QTNF1Q9BXJ1 281 aa18.16■□□□□ 0.5
VSX1-207ENST00000557285 GPR62Q9BZJ7 368 aa18.16■□□□□ 0.5
VSX1-207ENST00000557285 BLOC1S4Q9NUP1 217 aa18.16■□□□□ 0.5
VSX1-207ENST00000557285 STK39Q9UEW8 545 aa18.16■□□□□ 0.5
VSX1-207ENST00000557285 FBXO2Q9UK22 296 aaPredicted RBP18.16■□□□□ 0.5
VSX1-207ENST00000557285 ADAM28Q9UKQ2 775 aa18.16■□□□□ 0.5
VSX1-207ENST00000557285 IRAK3Q9Y616 596 aa18.16■□□□□ 0.5
VSX1-207ENST00000557285 PLXNA3P51805 1871 aa18.16■□□□□ 0.5
VSX1-207ENST00000557285 ZMYM2Q9UBW7 1377 aa18.16■□□□□ 0.5
VSX1-207ENST00000557285 MYH15Q9Y2K3 1946 aa18.15■□□□□ 0.5
VSX1-207ENST00000557285 FAM13AO94988 1023 aa18.15■□□□□ 0.5
VSX1-207ENST00000557285 KIF4AO95239 1232 aa18.15■□□□□ 0.5
VSX1-207ENST00000557285 HOXB8P17481 243 aaPredicted RBP18.15■□□□□ 0.5
VSX1-207ENST00000557285 YARSP54577 528 aaKnown RBP18.15■□□□□ 0.5
VSX1-207ENST00000557285 FOXD4L6Q3SYB3 417 aaPredicted RBP18.15■□□□□ 0.5
VSX1-207ENST00000557285 CES5AQ6NT32 575 aa18.15■□□□□ 0.5
VSX1-207ENST00000557285 FOXD4L3Q6VB84 417 aaPredicted RBP18.15■□□□□ 0.5
VSX1-207ENST00000557285 KCTD17Q8N5Z5 321 aa18.15■□□□□ 0.5
VSX1-207ENST00000557285 MYCT1Q8N699 235 aa18.15■□□□□ 0.5
VSX1-207ENST00000557285 TMEM161BQ8NDZ6 487 aa18.15■□□□□ 0.5
VSX1-207ENST00000557285 SLC22A17Q8WUG5 538 aa18.15■□□□□ 0.5
VSX1-207ENST00000557285 SPIRE2Q8WWL2 714 aa18.15■□□□□ 0.5
VSX1-207ENST00000557285 SUSD6Q92537 303 aa18.15■□□□□ 0.5
VSX1-207ENST00000557285 SNX21Q969T3 373 aa18.15■□□□□ 0.5
VSX1-207ENST00000557285 USP28Q96RU2 1077 aa18.15■□□□□ 0.5
VSX1-207ENST00000557285 PHF7Q9BWX1 381 aaPredicted RBP18.15■□□□□ 0.5
VSX1-207ENST00000557285 KCND2Q9NZV8 630 aa18.15■□□□□ 0.5
VSX1-207ENST00000557285 MUTYHQ9UIF7 546 aa18.15■□□□□ 0.5
VSX1-207ENST00000557285 PI4K2BG5E9Z4 385 aa18.14■□□□□ 0.49
VSX1-207ENST00000557285 K7ENM7 598 aa18.14■□□□□ 0.49
VSX1-207ENST00000557285 SLC26A4O43511 780 aa18.14■□□□□ 0.49
VSX1-207ENST00000557285 MAPTP10636 758 aaKnown RBP18.14■□□□□ 0.49
VSX1-207ENST00000557285 RPL17P18621 184 aaKnown RBP18.14■□□□□ 0.49
VSX1-207ENST00000557285 SEZ6Q53EL9 994 aa18.14■□□□□ 0.49
VSX1-207ENST00000557285 MPZL3Q6UWV2 235 aa18.14■□□□□ 0.49
VSX1-207ENST00000557285 TMC5Q6UXY8 1006 aa18.14■□□□□ 0.49
VSX1-207ENST00000557285 PPFIBP1Q86W92 1011 aa18.14■□□□□ 0.49
VSX1-207ENST00000557285 CEP57Q86XR8 500 aa18.14■□□□□ 0.49
VSX1-207ENST00000557285 RNF135Q8IUD6 432 aa18.14■□□□□ 0.49
VSX1-207ENST00000557285 FEZF2Q8TBJ5 459 aa18.14■□□□□ 0.49
VSX1-207ENST00000557285 RIN2Q8WYP3 895 aaPredicted RBP18.14■□□□□ 0.49
VSX1-207ENST00000557285 LARP4BQ92615 738 aaKnown RBP18.14■□□□□ 0.49
VSX1-207ENST00000557285 FBXL18Q96ME1 805 aa18.14■□□□□ 0.49
VSX1-207ENST00000557285 GOLGA2P5Q9HBQ8 144 aa18.14■□□□□ 0.49
VSX1-207ENST00000557285 DZANK1Q9NVP4 752 aa18.14■□□□□ 0.49
VSX1-207ENST00000557285 LARSQ9P2J5 1176 aaKnown RBP18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms