RNA–Protein interactions for RNA: ENST00000557026.5

NEK9-210, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 5,177 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-210ENST00000557026 A0A0G2JLW4 131 aa12.67□□□□□ -0.38
NEK9-210ENST00000557026 SEC24BO95487 1268 aa12.67□□□□□ -0.38
NEK9-210ENST00000557026 ALDH7A1P49419 539 aaKnown RBP12.67□□□□□ -0.38
NEK9-210ENST00000557026 BAATQ14032 418 aaPredicted RBP12.67□□□□□ -0.38
NEK9-210ENST00000557026 MXRA8Q9BRK3 442 aa12.67□□□□□ -0.38
NEK9-210ENST00000557026 EMILIN2Q9BXX0 1053 aa12.67□□□□□ -0.38
NEK9-210ENST00000557026 HDAC6Q9UBN7 1215 aa12.67□□□□□ -0.38
NEK9-210ENST00000557026 ERCC3P19447 782 aa12.67□□□□□ -0.38
NEK9-210ENST00000557026 MAP4P27816 1152 aaKnown RBP12.67□□□□□ -0.38
NEK9-210ENST00000557026 EPHX2P34913 555 aa12.67□□□□□ -0.38
NEK9-210ENST00000557026 ROR1Q01973 937 aa12.67□□□□□ -0.38
NEK9-210ENST00000557026 RBL2Q08999 1139 aa12.67□□□□□ -0.38
NEK9-210ENST00000557026 ACCSLQ4AC99 568 aa12.67□□□□□ -0.38
NEK9-210ENST00000557026 USP50Q70EL3 339 aaPredicted RBP12.67□□□□□ -0.38
NEK9-210ENST00000557026 RIN2Q8WYP3 895 aaPredicted RBP12.67□□□□□ -0.38
NEK9-210ENST00000557026 NRBP1Q9UHY1 535 aa12.67□□□□□ -0.38
NEK9-210ENST00000557026 PSMD14O00487 310 aa12.67□□□□□ -0.38
NEK9-210ENST00000557026 HARS2P49590 506 aaKnown RBP12.67□□□□□ -0.38
NEK9-210ENST00000557026 RGS4P49798 205 aa12.67□□□□□ -0.38
NEK9-210ENST00000557026 FKBP1BP68106 108 aa12.67□□□□□ -0.38
NEK9-210ENST00000557026 CDC42EP5Q6NZY7 148 aa12.67□□□□□ -0.38
NEK9-210ENST00000557026 PDZD8Q8NEN9 1154 aa12.67□□□□□ -0.38
NEK9-210ENST00000557026 SELENONQ9NZV5 590 aa12.67□□□□□ -0.38
NEK9-210ENST00000557026 FAM95CA0A1B0GW59 222 aa12.67□□□□□ -0.38
NEK9-210ENST00000557026 C3orf70A6NLC5 250 aaPredicted RBP12.67□□□□□ -0.38
NEK9-210ENST00000557026 TXNDC9O14530 226 aa12.67□□□□□ -0.38
NEK9-210ENST00000557026 APOL1O14791 398 aa12.67□□□□□ -0.38
NEK9-210ENST00000557026 DCTN3O75935 186 aa12.67□□□□□ -0.38
NEK9-210ENST00000557026 NTSR2O95665 410 aa12.67□□□□□ -0.38
NEK9-210ENST00000557026 F9P00740 461 aa12.67□□□□□ -0.38
NEK9-210ENST00000557026 PIGHQ14442 188 aaPredicted RBP12.67□□□□□ -0.38
NEK9-210ENST00000557026 TDRD10Q5VZ19 366 aaKnown RBP12.67□□□□□ -0.38
NEK9-210ENST00000557026 DNERQ8NFT8 737 aa12.67□□□□□ -0.38
NEK9-210ENST00000557026 TEKT4Q8WW24 435 aa12.67□□□□□ -0.38
NEK9-210ENST00000557026 ITM2BQ9Y287 266 aa12.67□□□□□ -0.38
NEK9-210ENST00000557026 AXIN2Q9Y2T1 843 aa12.67□□□□□ -0.38
NEK9-210ENST00000557026 HSPA4LO95757 839 aa12.66□□□□□ -0.38
NEK9-210ENST00000557026 TGFB3P10600 412 aa12.66□□□□□ -0.38
NEK9-210ENST00000557026 GTF2A1P52655 376 aaPredicted RBP12.66□□□□□ -0.38
NEK9-210ENST00000557026 CACNB3P54284 484 aa12.66□□□□□ -0.38
NEK9-210ENST00000557026 TPI1P60174 286 aa12.66□□□□□ -0.38
NEK9-210ENST00000557026 COPS2P61201 443 aa12.66□□□□□ -0.38
NEK9-210ENST00000557026 MUM1Q2TAK8 710 aa12.66□□□□□ -0.38
NEK9-210ENST00000557026 PPP6R3Q5H9R7 873 aaPredicted RBP12.66□□□□□ -0.38
NEK9-210ENST00000557026 GNASQ5JWF2 1037 aa12.66□□□□□ -0.38
NEK9-210ENST00000557026 USP17L6PQ6QN14 398 aa12.66□□□□□ -0.38
NEK9-210ENST00000557026 RCOR2Q8IZ40 523 aa12.66□□□□□ -0.38
NEK9-210ENST00000557026 FAM9CQ8IZT9 166 aa12.66□□□□□ -0.38
NEK9-210ENST00000557026 HSPH1Q92598 858 aa12.66□□□□□ -0.38
NEK9-210ENST00000557026 POLR3CQ9BUI4 534 aaPredicted RBP12.66□□□□□ -0.38
NEK9-210ENST00000557026 TMEM63CQ9P1W3 806 aa12.66□□□□□ -0.38
NEK9-210ENST00000557026 COPEO14579 308 aa12.66□□□□□ -0.38
NEK9-210ENST00000557026 RHOBTB3O94955 611 aa12.66□□□□□ -0.38
NEK9-210ENST00000557026 LMNAP02545 664 aaKnown RBP12.66□□□□□ -0.38
NEK9-210ENST00000557026 TAF6P49848 677 aa12.66□□□□□ -0.38
NEK9-210ENST00000557026 ENGASEQ8NFI3 743 aa12.66□□□□□ -0.38
NEK9-210ENST00000557026 C18orf8Q96DM3 657 aa12.66□□□□□ -0.38
NEK9-210ENST00000557026 OLA1Q9NTK5 396 aaKnown RBP12.66□□□□□ -0.38
NEK9-210ENST00000557026 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.66□□□□□ -0.38
NEK9-210ENST00000557026 CYP2D7A0A087X1C5 515 aa12.66□□□□□ -0.38
NEK9-210ENST00000557026 KCNQ2O43526 872 aa12.66□□□□□ -0.38
NEK9-210ENST00000557026 NPTXRO95502 500 aa12.66□□□□□ -0.38
NEK9-210ENST00000557026 ICAM1P05362 532 aa12.66□□□□□ -0.38
NEK9-210ENST00000557026 VCLP18206 1134 aa12.66□□□□□ -0.38
NEK9-210ENST00000557026 CHRNA5P30532 468 aa12.66□□□□□ -0.38
NEK9-210ENST00000557026 ANXA11P50995 505 aaKnown RBP12.66□□□□□ -0.38
NEK9-210ENST00000557026 GNGT1P63211 74 aa12.66□□□□□ -0.38
NEK9-210ENST00000557026 AP1B1Q10567 949 aa12.66□□□□□ -0.38
NEK9-210ENST00000557026 SPARCL1Q14515 664 aa12.66□□□□□ -0.38
NEK9-210ENST00000557026 EMC2Q15006 297 aa12.66□□□□□ -0.38
NEK9-210ENST00000557026 CCDC144BQ3MJ40 725 aa12.66□□□□□ -0.38
NEK9-210ENST00000557026 PATL1Q86TB9 770 aaKnown RBP12.66□□□□□ -0.38
NEK9-210ENST00000557026 TBC1D10CQ8IV04 446 aa12.66□□□□□ -0.38
NEK9-210ENST00000557026 PIGOQ8TEQ8 1089 aa12.66□□□□□ -0.38
NEK9-210ENST00000557026 SPON2Q9BUD6 331 aa12.66□□□□□ -0.38
NEK9-210ENST00000557026 FNDC3AQ9Y2H6 1198 aaKnown RBP12.66□□□□□ -0.38
NEK9-210ENST00000557026 BNIP3LO60238 219 aa12.66□□□□□ -0.38
NEK9-210ENST00000557026 CYP2B6P20813 491 aa12.66□□□□□ -0.38
NEK9-210ENST00000557026 OCRLQ01968 901 aa12.66□□□□□ -0.38
NEK9-210ENST00000557026 DHX34Q14147 1143 aaKnown RBP12.66□□□□□ -0.38
NEK9-210ENST00000557026 PI16Q6UXB8 463 aa12.66□□□□□ -0.38
NEK9-210ENST00000557026 MARCH10Q8NA82 808 aaPredicted RBP12.66□□□□□ -0.38
NEK9-210ENST00000557026 ATP11CQ8NB49 1132 aa12.66□□□□□ -0.38
NEK9-210ENST00000557026 MRPS31Q92665 395 aaKnown RBP12.66□□□□□ -0.38
NEK9-210ENST00000557026 ZMYND12Q9H0C1 365 aa12.66□□□□□ -0.38
NEK9-210ENST00000557026 CTIFO43310 598 aaKnown RBP12.65□□□□□ -0.38
NEK9-210ENST00000557026 SLC11A2P49281 568 aa12.65□□□□□ -0.38
NEK9-210ENST00000557026 SERPINB9P50453 376 aa12.65□□□□□ -0.38
NEK9-210ENST00000557026 KCNQ4P56696 695 aa12.65□□□□□ -0.38
NEK9-210ENST00000557026 ELF2Q15723 593 aa12.65□□□□□ -0.38
NEK9-210ENST00000557026 MCCC1Q96RQ3 725 aaPredicted RBP12.65□□□□□ -0.38
NEK9-210ENST00000557026 NT5C1AQ9BXI3 368 aa12.65□□□□□ -0.38
NEK9-210ENST00000557026 NMRK1Q9NWW6 199 aa12.65□□□□□ -0.38
NEK9-210ENST00000557026 ANGPTL2Q9UKU9 493 aa12.65□□□□□ -0.38
NEK9-210ENST00000557026 PCDHB12Q9Y5F1 795 aa12.65□□□□□ -0.38
NEK9-210ENST00000557026 RTN2O75298 545 aa12.65□□□□□ -0.38
NEK9-210ENST00000557026 CYP2D6P10635 497 aa12.65□□□□□ -0.38
NEK9-210ENST00000557026 AXLP30530 894 aa12.65□□□□□ -0.38
NEK9-210ENST00000557026 PLTPP55058 493 aa12.65□□□□□ -0.38
NEK9-210ENST00000557026 NFE2Q16621 373 aaPredicted RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms