RNA–Protein interactions for RNA: ENST00000557005.1

SYNE2-223, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 5,804 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-223ENST00000557005 NLRP7Q8WX94 980 aa5.29□□□□□ -1.56
SYNE2-223ENST00000557005 IWS1Q96ST2 819 aa5.29□□□□□ -1.56
SYNE2-223ENST00000557005 ZSWIM1Q9BR11 485 aa5.29□□□□□ -1.56
SYNE2-223ENST00000557005 LXNQ9BS40 222 aa5.29□□□□□ -1.56
SYNE2-223ENST00000557005 HSPBP1Q9NZL4 362 aa5.29□□□□□ -1.56
SYNE2-223ENST00000557005 NEU2Q9Y3R4 380 aa5.29□□□□□ -1.56
SYNE2-223ENST00000557005 RGPD8O14715 1765 aaPredicted RBP5.29□□□□□ -1.56
SYNE2-223ENST00000557005 H3BRJ5 948 aa5.29□□□□□ -1.56
SYNE2-223ENST00000557005 AGPSO00116 658 aa5.29□□□□□ -1.56
SYNE2-223ENST00000557005 MED24O75448 989 aa5.29□□□□□ -1.56
SYNE2-223ENST00000557005 HSPA4LO95757 839 aa5.29□□□□□ -1.56
SYNE2-223ENST00000557005 MX2P20592 715 aa5.29□□□□□ -1.56
SYNE2-223ENST00000557005 SH3BGRP55822 239 aaPredicted RBP5.29□□□□□ -1.56
SYNE2-223ENST00000557005 ROR1Q01973 937 aa5.29□□□□□ -1.56
SYNE2-223ENST00000557005 KLC1Q07866 573 aa5.29□□□□□ -1.56
SYNE2-223ENST00000557005 IFRD2Q12894 506 aaPredicted RBP5.29□□□□□ -1.56
SYNE2-223ENST00000557005 NR1H3Q13133 447 aa5.29□□□□□ -1.56
SYNE2-223ENST00000557005 ORC2Q13416 577 aaPredicted RBP5.29□□□□□ -1.56
SYNE2-223ENST00000557005 ART3Q13508 389 aa5.29□□□□□ -1.56
SYNE2-223ENST00000557005 LAMB3Q13751 1172 aa5.29□□□□□ -1.56
SYNE2-223ENST00000557005 PRKG1Q13976 671 aa5.29□□□□□ -1.56
SYNE2-223ENST00000557005 STAT4Q14765 748 aa5.29□□□□□ -1.56
SYNE2-223ENST00000557005 MTERF2Q49AM1 385 aa5.29□□□□□ -1.56
SYNE2-223ENST00000557005 EAPPQ56P03 285 aaPredicted RBP5.29□□□□□ -1.56
SYNE2-223ENST00000557005 MIS18BP1Q6P0N0 1132 aa5.29□□□□□ -1.56
SYNE2-223ENST00000557005 CYFIP1Q7L576 1253 aa5.29□□□□□ -1.56
SYNE2-223ENST00000557005 GLIS3Q8NEA6 775 aa5.29□□□□□ -1.56
SYNE2-223ENST00000557005 NKX2-3Q8TAU0 364 aa5.29□□□□□ -1.56
SYNE2-223ENST00000557005 CXorf38Q8TB03 319 aa5.29□□□□□ -1.56
SYNE2-223ENST00000557005 MPHOSPH6Q99547 160 aaKnown RBP5.29□□□□□ -1.56
SYNE2-223ENST00000557005 IP6K2Q9UHH9 426 aa5.29□□□□□ -1.56
SYNE2-223ENST00000557005 BCAP29Q9UHQ4 241 aa5.29□□□□□ -1.56
SYNE2-223ENST00000557005 LRRC37A3O60309 1634 aa5.29□□□□□ -1.56
SYNE2-223ENST00000557005 PDXKO00764 312 aa5.29□□□□□ -1.56
SYNE2-223ENST00000557005 SHOX2O60902 331 aaPredicted RBP5.29□□□□□ -1.56
SYNE2-223ENST00000557005 SNUPNO95149 360 aaKnown RBP5.29□□□□□ -1.56
SYNE2-223ENST00000557005 BMP3P12645 472 aa5.29□□□□□ -1.56
SYNE2-223ENST00000557005 KRT10P13645 584 aa5.29□□□□□ -1.56
SYNE2-223ENST00000557005 MAGEA4P43358 317 aa5.29□□□□□ -1.56
SYNE2-223ENST00000557005 IGBP1P78318 339 aa5.29□□□□□ -1.56
SYNE2-223ENST00000557005 EVX2Q03828 476 aa5.29□□□□□ -1.56
SYNE2-223ENST00000557005 AP3B2Q13367 1082 aa5.29□□□□□ -1.56
SYNE2-223ENST00000557005 GRAPQ13588 217 aa5.29□□□□□ -1.56
SYNE2-223ENST00000557005 MTDHQ86UE4 582 aaKnown RBP5.29□□□□□ -1.56
SYNE2-223ENST00000557005 CATSPER3Q86XQ3 398 aa5.29□□□□□ -1.56
SYNE2-223ENST00000557005 FUKQ8N0W3 1084 aa5.29□□□□□ -1.56
SYNE2-223ENST00000557005 GRAPLQ8TC17 118 aaPredicted RBP5.29□□□□□ -1.56
SYNE2-223ENST00000557005 AGAP11Q8TF27 550 aa5.29□□□□□ -1.56
SYNE2-223ENST00000557005 ANKRD36BP1Q96IX9 119 aa5.29□□□□□ -1.56
SYNE2-223ENST00000557005 MSTO1Q9BUK6 570 aa5.29□□□□□ -1.56
SYNE2-223ENST00000557005 TMEM120AQ9BXJ8 343 aa5.29□□□□□ -1.56
SYNE2-223ENST00000557005 TLR10Q9BXR5 811 aa5.29□□□□□ -1.56
SYNE2-223ENST00000557005 RXFP1Q9HBX9 757 aa5.29□□□□□ -1.56
SYNE2-223ENST00000557005 ETAA1Q9NY74 926 aa5.29□□□□□ -1.56
SYNE2-223ENST00000557005 PSMC3IPQ9P2W1 217 aaPredicted RBP5.29□□□□□ -1.56
SYNE2-223ENST00000557005 SUGT1Q9Y2Z0 365 aa5.29□□□□□ -1.56
SYNE2-223ENST00000557005 RGPD2P0DJD1 1756 aa5.29□□□□□ -1.56
SYNE2-223ENST00000557005 C4AP0C0L4 1744 aa5.29□□□□□ -1.56
SYNE2-223ENST00000557005 C4BP0C0L5 1744 aa5.29□□□□□ -1.56
SYNE2-223ENST00000557005 FLT1P17948 1338 aa5.28□□□□□ -1.56
SYNE2-223ENST00000557005 GMNNO75496 209 aa5.28□□□□□ -1.56
SYNE2-223ENST00000557005 FOSP01100 380 aaPredicted RBP5.28□□□□□ -1.56
SYNE2-223ENST00000557005 ITIH2P19823 946 aa5.28□□□□□ -1.56
SYNE2-223ENST00000557005 RFC5P40937 340 aa5.28□□□□□ -1.56
SYNE2-223ENST00000557005 CASP4P49662 377 aa5.28□□□□□ -1.56
SYNE2-223ENST00000557005 KCNJ2P63252 427 aa5.28□□□□□ -1.56
SYNE2-223ENST00000557005 ARHGAP4P98171 946 aa5.28□□□□□ -1.56
SYNE2-223ENST00000557005 ASPHQ12797 758 aa5.28□□□□□ -1.56
SYNE2-223ENST00000557005 NKX1-1Q15270 411 aaPredicted RBP5.28□□□□□ -1.56
SYNE2-223ENST00000557005 QRICH1Q2TAL8 776 aa5.28□□□□□ -1.56
SYNE2-223ENST00000557005 SLC27A3Q5K4L6 730 aa5.28□□□□□ -1.56
SYNE2-223ENST00000557005 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.28□□□□□ -1.56
SYNE2-223ENST00000557005 ATXN7L3BQ96GX2 97 aa5.28□□□□□ -1.56
SYNE2-223ENST00000557005 NSL1Q96IY1 281 aa5.28□□□□□ -1.56
SYNE2-223ENST00000557005 CEP170P1Q96L14 293 aa5.28□□□□□ -1.56
SYNE2-223ENST00000557005 RBM15Q96T37 977 aaKnown RBP eCLIP5.28□□□□□ -1.56
SYNE2-223ENST00000557005 MTA3Q9BTC8 594 aa5.28□□□□□ -1.56
SYNE2-223ENST00000557005 ZCWPW1Q9H0M4 648 aa5.28□□□□□ -1.56
SYNE2-223ENST00000557005 CDC42EP4Q9H3Q1 356 aaKnown RBP5.28□□□□□ -1.56
SYNE2-223ENST00000557005 ADAM22Q9P0K1 906 aa5.28□□□□□ -1.56
SYNE2-223ENST00000557005 INPP5FQ9Y2H2 1132 aa5.28□□□□□ -1.56
SYNE2-223ENST00000557005 SCINQ9Y6U3 715 aa5.28□□□□□ -1.56
SYNE2-223ENST00000557005 ARHGAP23Q9P227 1491 aa5.28□□□□□ -1.56
SYNE2-223ENST00000557005 ZNF335Q9H4Z2 1342 aaPredicted RBP5.28□□□□□ -1.56
SYNE2-223ENST00000557005 FAM237AA0A1B0GTK4 181 aa5.28□□□□□ -1.56
SYNE2-223ENST00000557005 PPP1R12AO14974 1030 aaPredicted RBP5.28□□□□□ -1.56
SYNE2-223ENST00000557005 GSTA1P08263 222 aa5.28□□□□□ -1.56
SYNE2-223ENST00000557005 ZCCHC18P0CG32 403 aa5.28□□□□□ -1.56
SYNE2-223ENST00000557005 DRD4P21917 467 aa5.28□□□□□ -1.56
SYNE2-223ENST00000557005 OSBPP22059 807 aa5.28□□□□□ -1.56
SYNE2-223ENST00000557005 BTKQ06187 659 aa5.28□□□□□ -1.56
SYNE2-223ENST00000557005 PDIA5Q14554 519 aa5.28□□□□□ -1.56
SYNE2-223ENST00000557005 HSP90AA5PQ58FG0 334 aa5.28□□□□□ -1.56
SYNE2-223ENST00000557005 SYDE1Q6ZW31 735 aaPredicted RBP5.28□□□□□ -1.56
SYNE2-223ENST00000557005 MIGA2Q7L4E1 593 aa5.28□□□□□ -1.56
SYNE2-223ENST00000557005 RSPH3Q86UC2 560 aa5.28□□□□□ -1.56
SYNE2-223ENST00000557005 ERICH1Q86X53 443 aa5.28□□□□□ -1.56
SYNE2-223ENST00000557005 TRIML2Q8N7C3 387 aa5.28□□□□□ -1.56
SYNE2-223ENST00000557005 PPM1NQ8N819 430 aa5.28□□□□□ -1.56
SYNE2-223ENST00000557005 VTI1AQ96AJ9 217 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms