RNA–Protein interactions for RNA: ENST00000556682.5

XRCC3-216, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-216ENST00000556682 RECQL4O94761 1208 aa11.86□□□□□ -0.51
XRCC3-216ENST00000556682 PLS3P13797 630 aa11.86□□□□□ -0.51
XRCC3-216ENST00000556682 SCP2P22307 547 aa11.86□□□□□ -0.51
XRCC3-216ENST00000556682 DSG1Q02413 1049 aa11.86□□□□□ -0.51
XRCC3-216ENST00000556682 CREMQ03060 361 aa11.86□□□□□ -0.51
XRCC3-216ENST00000556682 ELAVL2Q12926 359 aaKnown RBP11.86□□□□□ -0.51
XRCC3-216ENST00000556682 HSP90AA2PQ14568 343 aaPredicted RBP11.86□□□□□ -0.51
XRCC3-216ENST00000556682 USP41Q3LFD5 358 aa11.86□□□□□ -0.51
XRCC3-216ENST00000556682 NT5DC1Q5TFE4 455 aa11.86□□□□□ -0.51
XRCC3-216ENST00000556682 KCNK18Q7Z418 384 aa11.86□□□□□ -0.51
XRCC3-216ENST00000556682 SPIRE2Q8WWL2 714 aa11.86□□□□□ -0.51
XRCC3-216ENST00000556682 KHSRPQ92945 711 aaKnown RBP eCLIP11.86□□□□□ -0.51
XRCC3-216ENST00000556682 PNMA5Q96PV4 448 aa11.86□□□□□ -0.51
XRCC3-216ENST00000556682 PLIN2Q99541 437 aa11.86□□□□□ -0.51
XRCC3-216ENST00000556682 LRFN3Q9BTN0 628 aa11.86□□□□□ -0.51
XRCC3-216ENST00000556682 CCDC94Q9BW85 323 aaPredicted RBP11.86□□□□□ -0.51
XRCC3-216ENST00000556682 VN1R3Q9BXE9 311 aa11.86□□□□□ -0.51
XRCC3-216ENST00000556682 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.86□□□□□ -0.51
XRCC3-216ENST00000556682 TOPORSQ9NS56 1045 aaPredicted RBP11.86□□□□□ -0.51
XRCC3-216ENST00000556682 MARCH5Q9NX47 278 aa11.86□□□□□ -0.51
XRCC3-216ENST00000556682 LARSQ9P2J5 1176 aaKnown RBP11.86□□□□□ -0.51
XRCC3-216ENST00000556682 ARHGAP28Q9P2N2 729 aa11.86□□□□□ -0.51
XRCC3-216ENST00000556682 ADAM28Q9UKQ2 775 aa11.86□□□□□ -0.51
XRCC3-216ENST00000556682 GDAQ9Y2T3 454 aa11.86□□□□□ -0.51
XRCC3-216ENST00000556682 SF3B1O75533 1304 aaKnown RBP eCLIP11.86□□□□□ -0.51
XRCC3-216ENST00000556682 SFI1A8K8P3 1242 aa11.85□□□□□ -0.51
XRCC3-216ENST00000556682 PRR33A8MZF0 331 aa11.85□□□□□ -0.51
XRCC3-216ENST00000556682 K7ELQ4 463 aaPredicted RBP11.85□□□□□ -0.51
XRCC3-216ENST00000556682 SLC16A4O15374 487 aa11.85□□□□□ -0.51
XRCC3-216ENST00000556682 LILRB3O75022 631 aa11.85□□□□□ -0.51
XRCC3-216ENST00000556682 CNPP09543 421 aaKnown RBP11.85□□□□□ -0.51
XRCC3-216ENST00000556682 EPCAMP16422 314 aa11.85□□□□□ -0.51
XRCC3-216ENST00000556682 SYT1P21579 422 aa11.85□□□□□ -0.51
XRCC3-216ENST00000556682 SLC12A3P55017 1021 aa11.85□□□□□ -0.51
XRCC3-216ENST00000556682 RAD51AP2Q09MP3 1159 aa11.85□□□□□ -0.51
XRCC3-216ENST00000556682 TMEM119Q4V9L6 283 aa11.85□□□□□ -0.51
XRCC3-216ENST00000556682 HERC4Q5GLZ8 1057 aaPredicted RBP11.85□□□□□ -0.51
XRCC3-216ENST00000556682 RARS2Q5T160 578 aaKnown RBP11.85□□□□□ -0.51
XRCC3-216ENST00000556682 KIAA0319Q5VV43 1072 aa11.85□□□□□ -0.51
XRCC3-216ENST00000556682 EEF1DP3Q658K8 133 aa11.85□□□□□ -0.51
XRCC3-216ENST00000556682 FUT10Q6P4F1 479 aa11.85□□□□□ -0.51
XRCC3-216ENST00000556682 RNF168Q8IYW5 571 aaPredicted RBP11.85□□□□□ -0.51
XRCC3-216ENST00000556682 DAW1Q8N136 415 aa11.85□□□□□ -0.51
XRCC3-216ENST00000556682 SLC22A17Q8WUG5 538 aa11.85□□□□□ -0.51
XRCC3-216ENST00000556682 FBXL18Q96ME1 805 aa11.85□□□□□ -0.51
XRCC3-216ENST00000556682 ACO2Q99798 780 aaKnown RBP11.85□□□□□ -0.51
XRCC3-216ENST00000556682 SFXN1Q9H9B4 322 aa11.85□□□□□ -0.51
XRCC3-216ENST00000556682 ODF2LQ9ULJ1 636 aa11.85□□□□□ -0.51
XRCC3-216ENST00000556682 USP20Q9Y2K6 914 aa11.85□□□□□ -0.51
XRCC3-216ENST00000556682 CASTOR2A6NHX0 329 aa11.84□□□□□ -0.51
XRCC3-216ENST00000556682 EFEMP2O95967 443 aa11.84□□□□□ -0.51
XRCC3-216ENST00000556682 GLUD1P00367 558 aa11.84□□□□□ -0.51
XRCC3-216ENST00000556682 C1RP00736 705 aa11.84□□□□□ -0.51
XRCC3-216ENST00000556682 KRT18P05783 430 aaKnown RBP11.84□□□□□ -0.51
XRCC3-216ENST00000556682 MCF2P10911 925 aa11.84□□□□□ -0.51
XRCC3-216ENST00000556682 TXLNAP40222 546 aa11.84□□□□□ -0.51
XRCC3-216ENST00000556682 GRM5P41594 1212 aa11.84□□□□□ -0.51
XRCC3-216ENST00000556682 CLCN4P51793 760 aa11.84□□□□□ -0.51
XRCC3-216ENST00000556682 MAPK7Q13164 816 aa11.84□□□□□ -0.51
XRCC3-216ENST00000556682 ZNF568Q3ZCX4 644 aa11.84□□□□□ -0.51
XRCC3-216ENST00000556682 PDXDC1Q6P996 788 aa11.84□□□□□ -0.51
XRCC3-216ENST00000556682 TAS1R1Q7RTX1 841 aa11.84□□□□□ -0.51
XRCC3-216ENST00000556682 C12orf76Q8N812 135 aaPredicted RBP11.84□□□□□ -0.51
XRCC3-216ENST00000556682 ACAP3Q96P50 834 aa11.84□□□□□ -0.51
XRCC3-216ENST00000556682 TARS2Q9BW92 718 aaKnown RBP11.84□□□□□ -0.51
XRCC3-216ENST00000556682 GPR62Q9BZJ7 368 aa11.84□□□□□ -0.51
XRCC3-216ENST00000556682 ZSCAN16Q9H4T2 348 aaPredicted RBP11.84□□□□□ -0.51
XRCC3-216ENST00000556682 RXFP1Q9HBX9 757 aa11.84□□□□□ -0.51
XRCC3-216ENST00000556682 CHST7Q9NS84 486 aa11.84□□□□□ -0.51
XRCC3-216ENST00000556682 SLC38A7Q9NVC3 462 aa11.84□□□□□ -0.51
XRCC3-216ENST00000556682 CCDC39Q9UFE4 941 aa11.84□□□□□ -0.51
XRCC3-216ENST00000556682 MUTYHQ9UIF7 546 aa11.84□□□□□ -0.51
XRCC3-216ENST00000556682 HCN4Q9Y3Q4 1203 aa11.84□□□□□ -0.51
XRCC3-216ENST00000556682 PTGESO14684 152 aa11.83□□□□□ -0.52
XRCC3-216ENST00000556682 TEX28O15482 410 aa11.83□□□□□ -0.52
XRCC3-216ENST00000556682 TRAPPC3O43617 180 aa11.83□□□□□ -0.52
XRCC3-216ENST00000556682 TOM1L1O75674 476 aa11.83□□□□□ -0.52
XRCC3-216ENST00000556682 FAM13AO94988 1023 aa11.83□□□□□ -0.52
XRCC3-216ENST00000556682 EDN1P05305 212 aa11.83□□□□□ -0.52
XRCC3-216ENST00000556682 PDIA4P13667 645 aaKnown RBP11.83□□□□□ -0.52
XRCC3-216ENST00000556682 ABCD1P33897 745 aa11.83□□□□□ -0.52
XRCC3-216ENST00000556682 DDIT3P35638 169 aa11.83□□□□□ -0.52
XRCC3-216ENST00000556682 MATR3P43243 847 aaKnown RBP eCLIP11.83□□□□□ -0.52
XRCC3-216ENST00000556682 DHX8Q14562 1220 aaKnown RBP11.83□□□□□ -0.52
XRCC3-216ENST00000556682 DCLRE1AQ6PJP8 1040 aa11.83□□□□□ -0.52
XRCC3-216ENST00000556682 MPZL3Q6UWV2 235 aa11.83□□□□□ -0.52
XRCC3-216ENST00000556682 TMC5Q6UXY8 1006 aa11.83□□□□□ -0.52
XRCC3-216ENST00000556682 ZPBP2Q6X784 338 aa11.83□□□□□ -0.52
XRCC3-216ENST00000556682 ZBTB33Q86T24 672 aa11.83□□□□□ -0.52
XRCC3-216ENST00000556682 GPBP1Q86WP2 473 aa11.83□□□□□ -0.52
XRCC3-216ENST00000556682 PLCD3Q8N3E9 789 aa11.83□□□□□ -0.52
XRCC3-216ENST00000556682 MYCT1Q8N699 235 aa11.83□□□□□ -0.52
XRCC3-216ENST00000556682 TMEM161BQ8NDZ6 487 aa11.83□□□□□ -0.52
XRCC3-216ENST00000556682 HDAC7Q8WUI4 952 aa11.83□□□□□ -0.52
XRCC3-216ENST00000556682 RIN2Q8WYP3 895 aaPredicted RBP11.83□□□□□ -0.52
XRCC3-216ENST00000556682 BICD1Q96G01 975 aa11.83□□□□□ -0.52
XRCC3-216ENST00000556682 DDX27Q96GQ7 796 aaKnown RBP11.83□□□□□ -0.52
XRCC3-216ENST00000556682 UROC1Q96N76 676 aa11.83□□□□□ -0.52
XRCC3-216ENST00000556682 TTPALQ9BTX7 342 aa11.83□□□□□ -0.52
XRCC3-216ENST00000556682 CCSER1Q9C0I3 900 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms