RNA–Protein interactions for RNA: ENST00000556541.1

FOXN3-212, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-212ENST00000556541 PTPRSQ13332 1948 aa12.27□□□□□ -0.44
FOXN3-212ENST00000556541 TRIM49BA6NDI0 452 aa12.27□□□□□ -0.45
FOXN3-212ENST00000556541 ZNF233A6NK53 670 aa12.27□□□□□ -0.45
FOXN3-212ENST00000556541 ENPP3O14638 875 aa12.27□□□□□ -0.45
FOXN3-212ENST00000556541 HOXA2O43364 376 aa12.27□□□□□ -0.45
FOXN3-212ENST00000556541 MGEA5O60502 916 aa12.27□□□□□ -0.45
FOXN3-212ENST00000556541 IL18RAPO95256 599 aa12.27□□□□□ -0.45
FOXN3-212ENST00000556541 EPB41P11171 864 aaKnown RBP12.27□□□□□ -0.45
FOXN3-212ENST00000556541 CSF2RAP15509 400 aa12.27□□□□□ -0.45
FOXN3-212ENST00000556541 ZNF18P17022 549 aa12.27□□□□□ -0.45
FOXN3-212ENST00000556541 EEF1GP26641 437 aaKnown RBP12.27□□□□□ -0.45
FOXN3-212ENST00000556541 CLDN10P78369 228 aa12.27□□□□□ -0.45
FOXN3-212ENST00000556541 TMEM132AQ24JP5 1023 aa12.27□□□□□ -0.45
FOXN3-212ENST00000556541 HABP4Q5JVS0 413 aaKnown RBP12.27□□□□□ -0.45
FOXN3-212ENST00000556541 CRELD2Q6UXH1 353 aaPredicted RBP12.27□□□□□ -0.45
FOXN3-212ENST00000556541 INTS8Q75QN2 995 aaKnown RBP12.27□□□□□ -0.45
FOXN3-212ENST00000556541 RTN4RL1Q86UN2 441 aaPredicted RBP12.27□□□□□ -0.45
FOXN3-212ENST00000556541 ECHDC2Q86YB7 292 aa12.27□□□□□ -0.45
FOXN3-212ENST00000556541 DHX40Q8IX18 779 aaKnown RBP12.27□□□□□ -0.45
FOXN3-212ENST00000556541 SMG8Q8ND04 991 aaKnown RBP12.27□□□□□ -0.45
FOXN3-212ENST00000556541 DPF3Q92784 378 aa12.27□□□□□ -0.45
FOXN3-212ENST00000556541 BORCS6Q96GS4 357 aa12.27□□□□□ -0.45
FOXN3-212ENST00000556541 ZBTB45Q96K62 511 aaPredicted RBP12.27□□□□□ -0.45
FOXN3-212ENST00000556541 CCDC94Q9BW85 323 aaPredicted RBP12.27□□□□□ -0.45
FOXN3-212ENST00000556541 TRIM6Q9C030 488 aaPredicted RBP12.27□□□□□ -0.45
FOXN3-212ENST00000556541 ASB7Q9H672 318 aa12.27□□□□□ -0.45
FOXN3-212ENST00000556541 CBX8Q9HC52 389 aa12.27□□□□□ -0.45
FOXN3-212ENST00000556541 TOPORSQ9NS56 1045 aaPredicted RBP12.27□□□□□ -0.45
FOXN3-212ENST00000556541 TMEM161AQ9NX61 479 aa12.27□□□□□ -0.45
FOXN3-212ENST00000556541 ANKFY1Q9P2R3 1169 aa12.27□□□□□ -0.45
FOXN3-212ENST00000556541 GIT1Q9Y2X7 761 aa12.27□□□□□ -0.45
FOXN3-212ENST00000556541 DERAQ9Y315 318 aa12.27□□□□□ -0.45
FOXN3-212ENST00000556541 NFE2L3Q9Y4A8 694 aa12.27□□□□□ -0.45
FOXN3-212ENST00000556541 IPPQ9Y573 584 aa12.27□□□□□ -0.45
FOXN3-212ENST00000556541 PCDHB2Q9Y5E7 798 aa12.27□□□□□ -0.45
FOXN3-212ENST00000556541 FNDC1Q4ZHG4 1894 aaPredicted RBP12.27□□□□□ -0.45
FOXN3-212ENST00000556541 TDRD15B5MCY1 1934 aaKnown RBP12.27□□□□□ -0.45
FOXN3-212ENST00000556541 TTC26A0AVF1 554 aa12.26□□□□□ -0.45
FOXN3-212ENST00000556541 LRRC10BA6NIK2 292 aa12.26□□□□□ -0.45
FOXN3-212ENST00000556541 TISP43B9A030 160 aa12.26□□□□□ -0.45
FOXN3-212ENST00000556541 CLIC2O15247 247 aa12.26□□□□□ -0.45
FOXN3-212ENST00000556541 PMM2O15305 246 aa12.26□□□□□ -0.45
FOXN3-212ENST00000556541 EXOC3O60645 756 aa12.26□□□□□ -0.45
FOXN3-212ENST00000556541 NPTXRO95502 500 aa12.26□□□□□ -0.45
FOXN3-212ENST00000556541 STAG3L1P0CL83 205 aa12.26□□□□□ -0.45
FOXN3-212ENST00000556541 ATF7P17544 494 aaPredicted RBP12.26□□□□□ -0.45
FOXN3-212ENST00000556541 AP3M2P53677 418 aa12.26□□□□□ -0.45
FOXN3-212ENST00000556541 PSMD6Q15008 389 aa12.26□□□□□ -0.45
FOXN3-212ENST00000556541 SNRNP35Q16560 246 aaKnown RBP12.26□□□□□ -0.45
FOXN3-212ENST00000556541 RASIP1Q5U651 963 aa12.26□□□□□ -0.45
FOXN3-212ENST00000556541 SMYD5Q6GMV2 418 aa12.26□□□□□ -0.45
FOXN3-212ENST00000556541 ALKAL1Q6UXT8 129 aa12.26□□□□□ -0.45
FOXN3-212ENST00000556541 IRF2BP1Q8IU81 584 aa12.26□□□□□ -0.45
FOXN3-212ENST00000556541 NPAS4Q8IUM7 802 aa12.26□□□□□ -0.45
FOXN3-212ENST00000556541 HERVK_113Q902F9 699 aa12.26□□□□□ -0.45
FOXN3-212ENST00000556541 BADQ92934 168 aa12.26□□□□□ -0.45
FOXN3-212ENST00000556541 ACAP3Q96P50 834 aa12.26□□□□□ -0.45
FOXN3-212ENST00000556541 LBHD1Q9BQE6 289 aaPredicted RBP12.26□□□□□ -0.45
FOXN3-212ENST00000556541 SRRTQ9BXP5 876 aaKnown RBP12.26□□□□□ -0.45
FOXN3-212ENST00000556541 EIF2AQ9BY44 585 aaKnown RBP12.26□□□□□ -0.45
FOXN3-212ENST00000556541 HSD3B7Q9H2F3 369 aa12.26□□□□□ -0.45
FOXN3-212ENST00000556541 MTIF3Q9H2K0 278 aaKnown RBP12.26□□□□□ -0.45
FOXN3-212ENST00000556541 IKZF4Q9H2S9 585 aa12.26□□□□□ -0.45
FOXN3-212ENST00000556541 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.25□□□□□ -0.45
FOXN3-212ENST00000556541 CARNS1A5YM72 827 aa12.25□□□□□ -0.45
FOXN3-212ENST00000556541 BECN2A8MW95 431 aa12.25□□□□□ -0.45
FOXN3-212ENST00000556541 AKAP3O75969 853 aa12.25□□□□□ -0.45
FOXN3-212ENST00000556541 FGBP02675 491 aa12.25□□□□□ -0.45
FOXN3-212ENST00000556541 KCNE1P15382 129 aa12.25□□□□□ -0.45
FOXN3-212ENST00000556541 GTF2H1P32780 548 aa12.25□□□□□ -0.45
FOXN3-212ENST00000556541 MATR3P43243 847 aaKnown RBP eCLIP12.25□□□□□ -0.45
FOXN3-212ENST00000556541 CYP2J2P51589 502 aa12.25□□□□□ -0.45
FOXN3-212ENST00000556541 YARSP54577 528 aaKnown RBP12.25□□□□□ -0.45
FOXN3-212ENST00000556541 STX17P56962 302 aa12.25□□□□□ -0.45
FOXN3-212ENST00000556541 TPM4P67936 248 aa12.25□□□□□ -0.45
FOXN3-212ENST00000556541 CYP24A1Q07973 514 aa12.25□□□□□ -0.45
FOXN3-212ENST00000556541 TPD52L1Q16890 204 aaPredicted RBP12.25□□□□□ -0.45
FOXN3-212ENST00000556541 TMEM240Q5SV17 173 aa12.25□□□□□ -0.45
FOXN3-212ENST00000556541 C16orf59Q7L2K0 433 aa12.25□□□□□ -0.45
FOXN3-212ENST00000556541 FAM186BQ8IYM0 893 aa12.25□□□□□ -0.45
FOXN3-212ENST00000556541 AOPEPQ8N6M6 819 aa12.25□□□□□ -0.45
FOXN3-212ENST00000556541 PHOSPHO2Q8TCD6 241 aa12.25□□□□□ -0.45
FOXN3-212ENST00000556541 SNX27Q96L92 541 aa12.25□□□□□ -0.45
FOXN3-212ENST00000556541 RPF1Q9H9Y2 349 aaKnown RBP12.25□□□□□ -0.45
FOXN3-212ENST00000556541 CNTN3Q9P232 1028 aa12.25□□□□□ -0.45
FOXN3-212ENST00000556541 ARMCX3Q9UH62 379 aaPredicted RBP12.25□□□□□ -0.45
FOXN3-212ENST00000556541 USP20Q9Y2K6 914 aa12.25□□□□□ -0.45
FOXN3-212ENST00000556541 C2CD2Q9Y426 696 aa12.25□□□□□ -0.45
FOXN3-212ENST00000556541 STX10O60499 249 aa12.24□□□□□ -0.45
FOXN3-212ENST00000556541 AMHP03971 560 aa12.24□□□□□ -0.45
FOXN3-212ENST00000556541 ITGA4P13612 1032 aa12.24□□□□□ -0.45
FOXN3-212ENST00000556541 BMP8BP34820 402 aa12.24□□□□□ -0.45
FOXN3-212ENST00000556541 CASP4P49662 377 aa12.24□□□□□ -0.45
FOXN3-212ENST00000556541 BFSP1Q12934 665 aa12.24□□□□□ -0.45
FOXN3-212ENST00000556541 ENOX2Q16206 610 aaKnown RBP12.24□□□□□ -0.45
FOXN3-212ENST00000556541 TCTN1Q2MV58 587 aa12.24□□□□□ -0.45
FOXN3-212ENST00000556541 UVSSAQ2YD98 709 aa12.24□□□□□ -0.45
FOXN3-212ENST00000556541 SLC10A6Q3KNW5 377 aa12.24□□□□□ -0.45
FOXN3-212ENST00000556541 AGMOQ6ZNB7 445 aa12.24□□□□□ -0.45
FOXN3-212ENST00000556541 DEFB128Q7Z7B8 93 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms