RNA–Protein interactions for RNA: ENST00000556309.5

SUPT16H-206, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 3

Gene SUPT16H, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-206ENST00000556309 AASDHPPTQ9NRN7 309 aa4.81□□□□□ -1.64
SUPT16H-206ENST00000556309 SERPINB13Q9UIV8 391 aa4.81□□□□□ -1.64
SUPT16H-206ENST00000556309 SIK3Q9Y2K2 1263 aa4.81□□□□□ -1.64
SUPT16H-206ENST00000556309 PCDHA13Q9Y5I0 950 aa4.81□□□□□ -1.64
SUPT16H-206ENST00000556309 PPFIA2O75334 1257 aa4.8□□□□□ -1.64
SUPT16H-206ENST00000556309 CRHR1P34998 444 aa4.8□□□□□ -1.64
SUPT16H-206ENST00000556309 SREBF1P36956 1147 aa4.8□□□□□ -1.64
SUPT16H-206ENST00000556309 SLC6A9P48067 706 aa4.8□□□□□ -1.64
SUPT16H-206ENST00000556309 MGAT2Q10469 447 aa4.8□□□□□ -1.64
SUPT16H-206ENST00000556309 CRHR2Q13324 411 aa4.8□□□□□ -1.64
SUPT16H-206ENST00000556309 FHL2Q14192 279 aa4.8□□□□□ -1.64
SUPT16H-206ENST00000556309 RRP1BQ14684 758 aaKnown RBP4.8□□□□□ -1.64
SUPT16H-206ENST00000556309 CSRP2Q16527 193 aa4.8□□□□□ -1.64
SUPT16H-206ENST00000556309 UAP1L1Q3KQV9 507 aa4.8□□□□□ -1.64
SUPT16H-206ENST00000556309 NRN1LQ496H8 165 aa4.8□□□□□ -1.64
SUPT16H-206ENST00000556309 USP39Q53GS9 565 aaKnown RBP4.8□□□□□ -1.64
SUPT16H-206ENST00000556309 C1QL3Q5VWW1 255 aa4.8□□□□□ -1.64
SUPT16H-206ENST00000556309 MFSD5Q6N075 450 aa4.8□□□□□ -1.64
SUPT16H-206ENST00000556309 FAM180AQ6UWF9 173 aa4.8□□□□□ -1.64
SUPT16H-206ENST00000556309 RHOT1Q8IXI2 618 aa4.8□□□□□ -1.64
SUPT16H-206ENST00000556309 THEMISQ8N1K5 641 aaPredicted RBP4.8□□□□□ -1.64
SUPT16H-206ENST00000556309 RNF169Q8NCN4 708 aa4.8□□□□□ -1.64
SUPT16H-206ENST00000556309 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.8□□□□□ -1.64
SUPT16H-206ENST00000556309 MDGA1Q8NFP4 955 aa4.8□□□□□ -1.64
SUPT16H-206ENST00000556309 SLC35B2Q8TB61 432 aa4.8□□□□□ -1.64
SUPT16H-206ENST00000556309 CCHCR1Q8TD31 782 aa4.8□□□□□ -1.64
SUPT16H-206ENST00000556309 ST8SIA2Q92186 375 aa4.8□□□□□ -1.64
SUPT16H-206ENST00000556309 GPR87Q9BY21 358 aa4.8□□□□□ -1.64
SUPT16H-206ENST00000556309 CPEB1Q9BZB8 566 aaKnown RBP4.8□□□□□ -1.64
SUPT16H-206ENST00000556309 BCO1Q9HAY6 547 aa4.8□□□□□ -1.64
SUPT16H-206ENST00000556309 SPON1Q9HCB6 807 aa4.8□□□□□ -1.64
SUPT16H-206ENST00000556309 LIMCH1Q9UPQ0 1083 aa4.8□□□□□ -1.64
SUPT16H-206ENST00000556309 HDAC5Q9UQL6 1122 aa4.8□□□□□ -1.64
SUPT16H-206ENST00000556309 LUC7L2Q9Y383 392 aaKnown RBP4.8□□□□□ -1.64
SUPT16H-206ENST00000556309 CCDC154A6NI56 674 aa4.79□□□□□ -1.64
SUPT16H-206ENST00000556309 ALDH1L1O75891 902 aa4.79□□□□□ -1.64
SUPT16H-206ENST00000556309 SNUPNO95149 360 aaKnown RBP4.79□□□□□ -1.64
SUPT16H-206ENST00000556309 ZRANB2O95218 330 aaKnown RBP eCLIP4.79□□□□□ -1.64
SUPT16H-206ENST00000556309 GASTP01350 101 aa4.79□□□□□ -1.64
SUPT16H-206ENST00000556309 FPR1P21462 350 aa4.79□□□□□ -1.64
SUPT16H-206ENST00000556309 EDNRBP24530 442 aa4.79□□□□□ -1.64
SUPT16H-206ENST00000556309 NEK2P51955 445 aa4.79□□□□□ -1.64
SUPT16H-206ENST00000556309 RABGGTBP53611 331 aa4.79□□□□□ -1.64
SUPT16H-206ENST00000556309 IL10RAQ13651 578 aa4.79□□□□□ -1.64
SUPT16H-206ENST00000556309 C3orf36Q3SXR2 165 aa4.79□□□□□ -1.64
SUPT16H-206ENST00000556309 ANKRD35Q8N283 1001 aa4.79□□□□□ -1.64
SUPT16H-206ENST00000556309 ZGPATQ8N5A5 531 aaKnown RBP4.79□□□□□ -1.64
SUPT16H-206ENST00000556309 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.79□□□□□ -1.64
SUPT16H-206ENST00000556309 HOOK2Q96ED9 719 aa4.79□□□□□ -1.64
SUPT16H-206ENST00000556309 CEP89Q96ST8 783 aa4.79□□□□□ -1.64
SUPT16H-206ENST00000556309 ZNF341Q9BYN7 854 aa4.79□□□□□ -1.64
SUPT16H-206ENST00000556309 SLC13A1Q9BZW2 595 aa4.79□□□□□ -1.64
SUPT16H-206ENST00000556309 SENP6Q9GZR1 1112 aaPredicted RBP4.79□□□□□ -1.64
SUPT16H-206ENST00000556309 KCNH6Q9H252 994 aa4.79□□□□□ -1.64
SUPT16H-206ENST00000556309 IP6K2Q9UHH9 426 aa4.79□□□□□ -1.64
SUPT16H-206ENST00000556309 AJAP1Q9UKB5 411 aaPredicted RBP4.79□□□□□ -1.64
SUPT16H-206ENST00000556309 RUVBL1Q9Y265 456 aaKnown RBP4.79□□□□□ -1.64
SUPT16H-206ENST00000556309 GIT1Q9Y2X7 761 aa4.79□□□□□ -1.64
SUPT16H-206ENST00000556309 KLRG2A4D1S0 409 aaPredicted RBP4.78□□□□□ -1.64
SUPT16H-206ENST00000556309 HTRA2O43464 458 aaPredicted RBP4.78□□□□□ -1.64
SUPT16H-206ENST00000556309 IPO13O94829 963 aaKnown RBP4.78□□□□□ -1.64
SUPT16H-206ENST00000556309 ENDOD1O94919 500 aa4.78□□□□□ -1.64
SUPT16H-206ENST00000556309 RAP2AP10114 183 aa4.78□□□□□ -1.64
SUPT16H-206ENST00000556309 HSP90B1P14625 803 aaKnown RBP4.78□□□□□ -1.64
SUPT16H-206ENST00000556309 ACRV1P26436 265 aa4.78□□□□□ -1.64
SUPT16H-206ENST00000556309 PCSK1P29120 753 aa4.78□□□□□ -1.64
SUPT16H-206ENST00000556309 RAP2BP61225 183 aa4.78□□□□□ -1.64
SUPT16H-206ENST00000556309 DGCR2P98153 550 aa4.78□□□□□ -1.64
SUPT16H-206ENST00000556309 DPTQ07507 201 aa4.78□□□□□ -1.64
SUPT16H-206ENST00000556309 CNGB1Q14028 1251 aaPredicted RBP4.78□□□□□ -1.64
SUPT16H-206ENST00000556309 TTF1Q15361 905 aaPredicted RBP4.78□□□□□ -1.64
SUPT16H-206ENST00000556309 FAM47AQ5JRC9 791 aa4.78□□□□□ -1.64
SUPT16H-206ENST00000556309 AFMIDQ63HM1 303 aa4.78□□□□□ -1.64
SUPT16H-206ENST00000556309 PDZD4Q76G19 769 aaPredicted RBP4.78□□□□□ -1.64
SUPT16H-206ENST00000556309 APBB1IPQ7Z5R6 666 aaPredicted RBP4.78□□□□□ -1.64
SUPT16H-206ENST00000556309 FAM83AQ86UY5 434 aa4.78□□□□□ -1.64
SUPT16H-206ENST00000556309 C1orf210Q8IVY1 113 aa4.78□□□□□ -1.64
SUPT16H-206ENST00000556309 RAVER1Q8IY67 606 aaKnown RBP4.78□□□□□ -1.64
SUPT16H-206ENST00000556309 IL17DQ8TAD2 202 aa4.78□□□□□ -1.64
SUPT16H-206ENST00000556309 SSH1Q8WYL5 1049 aa4.78□□□□□ -1.64
SUPT16H-206ENST00000556309 KAT5Q92993 513 aa4.78□□□□□ -1.64
SUPT16H-206ENST00000556309 COA7Q96BR5 231 aa4.78□□□□□ -1.64
SUPT16H-206ENST00000556309 CHMP4CQ96CF2 233 aa4.78□□□□□ -1.64
SUPT16H-206ENST00000556309 MNTQ99583 582 aa4.78□□□□□ -1.64
SUPT16H-206ENST00000556309 MYOCQ99972 504 aa4.78□□□□□ -1.64
SUPT16H-206ENST00000556309 C7orf25Q9BPX7 421 aa4.78□□□□□ -1.64
SUPT16H-206ENST00000556309 LANCL2Q9NS86 450 aa4.78□□□□□ -1.64
SUPT16H-206ENST00000556309 TYW1Q9NV66 732 aaKnown RBP4.78□□□□□ -1.64
SUPT16H-206ENST00000556309 SPEF1Q9Y4P9 236 aa4.78□□□□□ -1.64
SUPT16H-206ENST00000556309 IPPQ9Y573 584 aa4.78□□□□□ -1.64
SUPT16H-206ENST00000556309 ACTL7AQ9Y615 435 aa4.78□□□□□ -1.64
SUPT16H-206ENST00000556309 ATRNL1Q5VV63 1379 aa4.78□□□□□ -1.64
SUPT16H-206ENST00000556309 FAM171A2A8MVW0 826 aa4.77□□□□□ -1.65
SUPT16H-206ENST00000556309 CXorf49A8MYA2 514 aaPredicted RBP4.77□□□□□ -1.65
SUPT16H-206ENST00000556309 PRR5-ARHGAP8B1AHC4 643 aa4.77□□□□□ -1.65
SUPT16H-206ENST00000556309 CYP27B1O15528 508 aa4.77□□□□□ -1.65
SUPT16H-206ENST00000556309 FAM20BO75063 409 aa4.77□□□□□ -1.65
SUPT16H-206ENST00000556309 AMY1AP04745 511 aa4.77□□□□□ -1.65
SUPT16H-206ENST00000556309 C1SP09871 688 aa4.77□□□□□ -1.65
SUPT16H-206ENST00000556309 ALOX15P16050 662 aaPredicted RBP4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms