RNA–Protein interactions for RNA: ENST00000556268.1

GTF2A1-204, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 5

Gene GTF2A1, Length 864 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-204ENST00000556268 HDXQ7Z353 690 aa10.38□□□□□ -0.75
GTF2A1-204ENST00000556268 SMC5Q8IY18 1101 aa10.38□□□□□ -0.75
GTF2A1-204ENST00000556268 ENAHQ8N8S7 591 aaPredicted RBP10.38□□□□□ -0.75
GTF2A1-204ENST00000556268 FAM181AQ8N9Y4 354 aa10.38□□□□□ -0.75
GTF2A1-204ENST00000556268 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.38□□□□□ -0.75
GTF2A1-204ENST00000556268 C16orf70Q9BSU1 422 aa10.38□□□□□ -0.75
GTF2A1-204ENST00000556268 KATNAL1Q9BW62 490 aa10.38□□□□□ -0.75
GTF2A1-204ENST00000556268 INSL6Q9Y581 213 aa10.38□□□□□ -0.75
GTF2A1-204ENST00000556268 U3KQE9 123 aa10.38□□□□□ -0.75
GTF2A1-204ENST00000556268 PARP1P09874 1014 aaKnown RBP10.37□□□□□ -0.75
GTF2A1-204ENST00000556268 TFE3P19532 575 aaPredicted RBP10.37□□□□□ -0.75
GTF2A1-204ENST00000556268 HSDL1Q3SXM5 330 aa10.37□□□□□ -0.75
GTF2A1-204ENST00000556268 PLEKHG4Q58EX7 1191 aa10.37□□□□□ -0.75
GTF2A1-204ENST00000556268 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.37□□□□□ -0.75
GTF2A1-204ENST00000556268 SERINC5Q86VE9 423 aa10.37□□□□□ -0.75
GTF2A1-204ENST00000556268 FAM178BQ8IXR5 827 aa10.37□□□□□ -0.75
GTF2A1-204ENST00000556268 DHX37Q8IY37 1157 aaKnown RBP10.37□□□□□ -0.75
GTF2A1-204ENST00000556268 DBF4BQ8NFT6 615 aa10.37□□□□□ -0.75
GTF2A1-204ENST00000556268 PDCD2LQ9BRP1 358 aa10.37□□□□□ -0.75
GTF2A1-204ENST00000556268 AMNQ9BXJ7 453 aa10.37□□□□□ -0.75
GTF2A1-204ENST00000556268 KAT14Q9H8E8 782 aa10.37□□□□□ -0.75
GTF2A1-204ENST00000556268 VAT1LQ9HCJ6 419 aa10.37□□□□□ -0.75
GTF2A1-204ENST00000556268 MRVI1Q9Y6F6 885 aa10.37□□□□□ -0.75
GTF2A1-204ENST00000556268 B4E1Z4 1266 aa10.36□□□□□ -0.75
GTF2A1-204ENST00000556268 PPP1R11O60927 126 aaPredicted RBP10.36□□□□□ -0.75
GTF2A1-204ENST00000556268 CFBP00751 764 aa10.36□□□□□ -0.75
GTF2A1-204ENST00000556268 RRP1P56182 461 aaKnown RBP10.36□□□□□ -0.75
GTF2A1-204ENST00000556268 SEC23AQ15436 765 aa10.36□□□□□ -0.75
GTF2A1-204ENST00000556268 SLC35G1Q2M3R5 365 aa10.36□□□□□ -0.75
GTF2A1-204ENST00000556268 NEK9Q8TD19 979 aa10.36□□□□□ -0.75
GTF2A1-204ENST00000556268 GDPD5Q8WTR4 605 aa10.36□□□□□ -0.75
GTF2A1-204ENST00000556268 TOP1MTQ969P6 601 aa10.36□□□□□ -0.75
GTF2A1-204ENST00000556268 RILPL2Q969X0 211 aa10.36□□□□□ -0.75
GTF2A1-204ENST00000556268 CRBNQ96SW2 442 aa10.36□□□□□ -0.75
GTF2A1-204ENST00000556268 ALG1Q9BT22 464 aa10.36□□□□□ -0.75
GTF2A1-204ENST00000556268 DSCC1Q9BVC3 393 aa10.36□□□□□ -0.75
GTF2A1-204ENST00000556268 LNPKQ9C0E8 428 aa10.36□□□□□ -0.75
GTF2A1-204ENST00000556268 MIR1-1HGQ9H1L0 117 aa10.36□□□□□ -0.75
GTF2A1-204ENST00000556268 UBE2ZQ9H832 354 aaPredicted RBP10.36□□□□□ -0.75
GTF2A1-204ENST00000556268 TLR6Q9Y2C9 796 aa10.36□□□□□ -0.75
GTF2A1-204ENST00000556268 PIEZO1Q92508 2521 aa10.36□□□□□ -0.75
GTF2A1-204ENST00000556268 EMSYQ7Z589 1322 aa10.35□□□□□ -0.75
GTF2A1-204ENST00000556268 RSPH10B2B2RC85 870 aa10.35□□□□□ -0.75
GTF2A1-204ENST00000556268 KLRF2D3W0D1 207 aa10.35□□□□□ -0.75
GTF2A1-204ENST00000556268 RBAK-RBAKDNI3L0D1 243 aa10.35□□□□□ -0.75
GTF2A1-204ENST00000556268 RSPH10BP0C881 870 aa10.35□□□□□ -0.75
GTF2A1-204ENST00000556268 ZNF286BP0CG31 522 aa10.35□□□□□ -0.75
GTF2A1-204ENST00000556268 ADAM17P78536 824 aa10.35□□□□□ -0.75
GTF2A1-204ENST00000556268 PGM5Q15124 567 aa10.35□□□□□ -0.75
GTF2A1-204ENST00000556268 CWC27Q6UX04 472 aaKnown RBP10.35□□□□□ -0.75
GTF2A1-204ENST00000556268 ARMCX6Q7L4S7 300 aa10.35□□□□□ -0.75
GTF2A1-204ENST00000556268 PLD6Q8N2A8 252 aaKnown RBP10.35□□□□□ -0.75
GTF2A1-204ENST00000556268 KCT2Q8NC54 265 aa10.35□□□□□ -0.75
GTF2A1-204ENST00000556268 ZNF507Q8TCN5 953 aa10.35□□□□□ -0.75
GTF2A1-204ENST00000556268 MRPL38Q96DV4 380 aaKnown RBP10.35□□□□□ -0.75
GTF2A1-204ENST00000556268 SPATA33Q96N06 139 aa10.35□□□□□ -0.75
GTF2A1-204ENST00000556268 RNPEPQ9H4A4 650 aa10.35□□□□□ -0.75
GTF2A1-204ENST00000556268 BCAS3Q9H6U6 928 aa10.35□□□□□ -0.75
GTF2A1-204ENST00000556268 RIOX1Q9H6W3 641 aa10.35□□□□□ -0.75
GTF2A1-204ENST00000556268 FBRSQ9HAH7 460 aa10.35□□□□□ -0.75
GTF2A1-204ENST00000556268 CTNNA3Q9UI47 895 aa10.35□□□□□ -0.75
GTF2A1-204ENST00000556268 MAD2L2Q9UI95 211 aa10.35□□□□□ -0.75
GTF2A1-204ENST00000556268 PCDHA1Q9Y5I3 950 aa10.35□□□□□ -0.75
GTF2A1-204ENST00000556268 PTPRSQ13332 1948 aa10.35□□□□□ -0.75
GTF2A1-204ENST00000556268 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.34□□□□□ -0.75
GTF2A1-204ENST00000556268 H3BNC9 293 aa10.34□□□□□ -0.75
GTF2A1-204ENST00000556268 ZBTB5O15062 677 aa10.34□□□□□ -0.75
GTF2A1-204ENST00000556268 CAND2O75155 1236 aa10.34□□□□□ -0.75
GTF2A1-204ENST00000556268 GGPS1O95749 300 aa10.34□□□□□ -0.75
GTF2A1-204ENST00000556268 MYCLP12524 364 aaPredicted RBP10.34□□□□□ -0.75
GTF2A1-204ENST00000556268 ICAM3P32942 547 aa10.34□□□□□ -0.75
GTF2A1-204ENST00000556268 THPOP40225 353 aa10.34□□□□□ -0.75
GTF2A1-204ENST00000556268 NUCB1Q02818 461 aa10.34□□□□□ -0.75
GTF2A1-204ENST00000556268 IMMTQ16891 758 aaKnown RBP10.34□□□□□ -0.75
GTF2A1-204ENST00000556268 EPC2Q52LR7 807 aa10.34□□□□□ -0.75
GTF2A1-204ENST00000556268 PHC3Q8NDX5 983 aa10.34□□□□□ -0.75
GTF2A1-204ENST00000556268 IL31RAQ8NI17 732 aa10.34□□□□□ -0.75
GTF2A1-204ENST00000556268 GIPC2Q8TF65 315 aa10.34□□□□□ -0.75
GTF2A1-204ENST00000556268 SAMD11Q96NU1 681 aa10.34□□□□□ -0.75
GTF2A1-204ENST00000556268 C17orf80Q9BSJ5 609 aa10.34□□□□□ -0.75
GTF2A1-204ENST00000556268 KRT23Q9C075 422 aa10.34□□□□□ -0.75
GTF2A1-204ENST00000556268 WNT10AQ9GZT5 417 aa10.34□□□□□ -0.75
GTF2A1-204ENST00000556268 CNNM2Q9H8M5 875 aa10.34□□□□□ -0.75
GTF2A1-204ENST00000556268 MTUS1Q9ULD2 1270 aa10.34□□□□□ -0.75
GTF2A1-204ENST00000556268 KIAA1217Q5T5P2 1943 aa10.33□□□□□ -0.76
GTF2A1-204ENST00000556268 GCOM1H8Y6P7 765 aaPredicted RBP10.33□□□□□ -0.76
GTF2A1-204ENST00000556268 HIP1O00291 1037 aa10.33□□□□□ -0.76
GTF2A1-204ENST00000556268 CYTH3O43739 400 aa10.33□□□□□ -0.76
GTF2A1-204ENST00000556268 IGHDP01880 384 aa10.33□□□□□ -0.76
GTF2A1-204ENST00000556268 AMHP03971 560 aa10.33□□□□□ -0.76
GTF2A1-204ENST00000556268 POLR2MP0CAP2 368 aa10.33□□□□□ -0.76
GTF2A1-204ENST00000556268 SMIM10L2AP0DMW4 78 aa10.33□□□□□ -0.76
GTF2A1-204ENST00000556268 SMIM10L2BP0DMW5 78 aa10.33□□□□□ -0.76
GTF2A1-204ENST00000556268 UBA1P22314 1058 aaKnown RBP10.33□□□□□ -0.76
GTF2A1-204ENST00000556268 HOXA13P31271 388 aaPredicted RBP10.33□□□□□ -0.76
GTF2A1-204ENST00000556268 IFIT1BQ5T764 474 aaKnown RBP10.33□□□□□ -0.76
GTF2A1-204ENST00000556268 CHD1LQ86WJ1 897 aa10.33□□□□□ -0.76
GTF2A1-204ENST00000556268 FLCNQ8NFG4 579 aa10.33□□□□□ -0.76
GTF2A1-204ENST00000556268 ATP6V0A1Q93050 837 aa10.33□□□□□ -0.76
GTF2A1-204ENST00000556268 RWDD1Q9H446 243 aaPredicted RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms