RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 ANKRD11Q6UB99 2663 aaPredicted RBP7.87□□□□□ -1.15
ATXN3-236ENST00000556220 TTC41PQ6P2S7 1318 aa7.87□□□□□ -1.15
ATXN3-236ENST00000556220 KDM3AQ9Y4C1 1321 aa7.87□□□□□ -1.15
ATXN3-236ENST00000556220 GSTTP1A0A1W2PQM5 241 aa7.87□□□□□ -1.15
ATXN3-236ENST00000556220 PRR5-ARHGAP8B1AHC4 643 aa7.87□□□□□ -1.15
ATXN3-236ENST00000556220 C9IYK1 514 aa7.87□□□□□ -1.15
ATXN3-236ENST00000556220 ATG7O95352 703 aa7.87□□□□□ -1.15
ATXN3-236ENST00000556220 ADRB1P08588 477 aa7.87□□□□□ -1.15
ATXN3-236ENST00000556220 MARK3P27448 753 aa7.87□□□□□ -1.15
ATXN3-236ENST00000556220 HAND2P61296 217 aa7.87□□□□□ -1.15
ATXN3-236ENST00000556220 IGBP1P78318 339 aa7.87□□□□□ -1.15
ATXN3-236ENST00000556220 FAM189BP81408 668 aa7.87□□□□□ -1.15
ATXN3-236ENST00000556220 ARHGAP8P85298 464 aa7.87□□□□□ -1.15
ATXN3-236ENST00000556220 TMEM62Q0P6H9 643 aa7.87□□□□□ -1.15
ATXN3-236ENST00000556220 SMC1AQ14683 1233 aaKnown RBP7.87□□□□□ -1.15
ATXN3-236ENST00000556220 TMEM266Q2M3C6 531 aa7.87□□□□□ -1.15
ATXN3-236ENST00000556220 KCNT2Q6UVM3 1135 aa7.87□□□□□ -1.15
ATXN3-236ENST00000556220 LRRC55Q6ZSA7 311 aa7.87□□□□□ -1.15
ATXN3-236ENST00000556220 OTOP3Q7RTS5 596 aa7.87□□□□□ -1.15
ATXN3-236ENST00000556220 C1orf210Q8IVY1 113 aa7.87□□□□□ -1.15
ATXN3-236ENST00000556220 NME8Q8N427 588 aa7.87□□□□□ -1.15
ATXN3-236ENST00000556220 IL22RA1Q8N6P7 574 aa7.87□□□□□ -1.15
ATXN3-236ENST00000556220 GIMAP8Q8ND71 665 aaPredicted RBP7.87□□□□□ -1.15
ATXN3-236ENST00000556220 PIK3R5Q8WYR1 880 aa7.87□□□□□ -1.15
ATXN3-236ENST00000556220 ESR2Q92731 530 aa7.87□□□□□ -1.15
ATXN3-236ENST00000556220 GLG1Q92896 1179 aa7.87□□□□□ -1.15
ATXN3-236ENST00000556220 BORCS6Q96GS4 357 aa7.87□□□□□ -1.15
ATXN3-236ENST00000556220 NSUN5Q96P11 429 aaKnown RBP7.87□□□□□ -1.15
ATXN3-236ENST00000556220 ADAM2Q99965 735 aa7.87□□□□□ -1.15
ATXN3-236ENST00000556220 KRTAP4-8Q9BYQ9 185 aa7.87□□□□□ -1.15
ATXN3-236ENST00000556220 MRPL18Q9H0U6 180 aaKnown RBP7.87□□□□□ -1.15
ATXN3-236ENST00000556220 MUC3BQ9H195 1237 aa7.87□□□□□ -1.15
ATXN3-236ENST00000556220 SMARCAD1Q9H4L7 1026 aa7.87□□□□□ -1.15
ATXN3-236ENST00000556220 RNF41Q9H4P4 317 aaPredicted RBP7.87□□□□□ -1.15
ATXN3-236ENST00000556220 DCTPP1Q9H773 170 aa7.87□□□□□ -1.15
ATXN3-236ENST00000556220 ATP6V0A4Q9HBG4 840 aa7.87□□□□□ -1.15
ATXN3-236ENST00000556220 HELLSQ9NRZ9 838 aa7.87□□□□□ -1.15
ATXN3-236ENST00000556220 DZANK1Q9NVP4 752 aa7.87□□□□□ -1.15
ATXN3-236ENST00000556220 IGSF9Q9P2J2 1179 aa7.87□□□□□ -1.15
ATXN3-236ENST00000556220 PCDHA2Q9Y5H9 948 aa7.87□□□□□ -1.15
ATXN3-236ENST00000556220 KAT6AQ92794 2004 aa7.86□□□□□ -1.15
ATXN3-236ENST00000556220 ASPMQ8IZT6 3477 aa7.86□□□□□ -1.15
ATXN3-236ENST00000556220 FRMPD4Q14CM0 1322 aa7.86□□□□□ -1.15
ATXN3-236ENST00000556220 DENND3A2RUS2 1198 aa7.86□□□□□ -1.15
ATXN3-236ENST00000556220 ZBTB5O15062 677 aa7.86□□□□□ -1.15
ATXN3-236ENST00000556220 NARSO43776 548 aaKnown RBP7.86□□□□□ -1.15
ATXN3-236ENST00000556220 CXCL14O95715 111 aa7.86□□□□□ -1.15
ATXN3-236ENST00000556220 FGFR1P11362 822 aa7.86□□□□□ -1.15
ATXN3-236ENST00000556220 INSRRP14616 1297 aa7.86□□□□□ -1.15
ATXN3-236ENST00000556220 PPM1AP35813 382 aa7.86□□□□□ -1.15
ATXN3-236ENST00000556220 NT5C2P49902 561 aa7.86□□□□□ -1.15
ATXN3-236ENST00000556220 COL9A2Q14055 689 aaPredicted RBP7.86□□□□□ -1.15
ATXN3-236ENST00000556220 LRP8Q14114 963 aa7.86□□□□□ -1.15
ATXN3-236ENST00000556220 BMS1Q14692 1282 aaKnown RBP7.86□□□□□ -1.15
ATXN3-236ENST00000556220 XRRA1Q6P2D8 792 aa7.86□□□□□ -1.15
ATXN3-236ENST00000556220 NLRX1Q86UT6 975 aa7.86□□□□□ -1.15
ATXN3-236ENST00000556220 IQCA1Q86XH1 822 aa7.86□□□□□ -1.15
ATXN3-236ENST00000556220 STK32AQ8WU08 396 aa7.86□□□□□ -1.15
ATXN3-236ENST00000556220 CHAMP1Q96JM3 812 aa7.86□□□□□ -1.15
ATXN3-236ENST00000556220 ZNF558Q96NG5 402 aa7.86□□□□□ -1.15
ATXN3-236ENST00000556220 CASD1Q96PB1 797 aa7.86□□□□□ -1.15
ATXN3-236ENST00000556220 RTKNQ9BST9 563 aa7.86□□□□□ -1.15
ATXN3-236ENST00000556220 TMEM117Q9H0C3 514 aa7.86□□□□□ -1.15
ATXN3-236ENST00000556220 ELAC1Q9H777 363 aaKnown RBP7.86□□□□□ -1.15
ATXN3-236ENST00000556220 AKTIPQ9H8T0 292 aa7.86□□□□□ -1.15
ATXN3-236ENST00000556220 TMEM161AQ9NX61 479 aa7.86□□□□□ -1.15
ATXN3-236ENST00000556220 SPG21Q9NZD8 308 aa7.86□□□□□ -1.15
ATXN3-236ENST00000556220 DLGAP2Q9P1A6 1054 aa7.86□□□□□ -1.15
ATXN3-236ENST00000556220 FNDC3AQ9Y2H6 1198 aaKnown RBP7.86□□□□□ -1.15
ATXN3-236ENST00000556220 NOC2LQ9Y3T9 749 aaKnown RBP7.86□□□□□ -1.15
ATXN3-236ENST00000556220 ZMYM6O95789 1325 aa7.85□□□□□ -1.15
ATXN3-236ENST00000556220 SMIM35A0A1B0GVV1 85 aa7.85□□□□□ -1.15
ATXN3-236ENST00000556220 KLRF2D3W0D1 207 aa7.85□□□□□ -1.15
ATXN3-236ENST00000556220 GPR182O15218 404 aa7.85□□□□□ -1.15
ATXN3-236ENST00000556220 KINO60870 393 aaKnown RBP7.85□□□□□ -1.15
ATXN3-236ENST00000556220 ATP9AO75110 1047 aa7.85□□□□□ -1.15
ATXN3-236ENST00000556220 RPS6KA5O75582 802 aa7.85□□□□□ -1.15
ATXN3-236ENST00000556220 DCNP07585 359 aaKnown RBP7.85□□□□□ -1.15
ATXN3-236ENST00000556220 KCNA2P16389 499 aa7.85□□□□□ -1.15
ATXN3-236ENST00000556220 PBX3P40426 434 aa7.85□□□□□ -1.15
ATXN3-236ENST00000556220 TRAF1Q13077 416 aa7.85□□□□□ -1.15
ATXN3-236ENST00000556220 TRIP4Q15650 581 aaPredicted RBP7.85□□□□□ -1.15
ATXN3-236ENST00000556220 MCMDC2Q4G0Z9 681 aa7.85□□□□□ -1.15
ATXN3-236ENST00000556220 SPECC1Q5M775 1068 aa7.85□□□□□ -1.15
ATXN3-236ENST00000556220 ODR4Q5SWX8 454 aa7.85□□□□□ -1.15
ATXN3-236ENST00000556220 PHLDB3Q6NSJ2 640 aa7.85□□□□□ -1.15
ATXN3-236ENST00000556220 TMC5Q6UXY8 1006 aa7.85□□□□□ -1.15
ATXN3-236ENST00000556220 CCDC149Q6ZUS6 474 aa7.85□□□□□ -1.15
ATXN3-236ENST00000556220 GPR149Q86SP6 731 aa7.85□□□□□ -1.15
ATXN3-236ENST00000556220 TBC1D10CQ8IV04 446 aa7.85□□□□□ -1.15
ATXN3-236ENST00000556220 ENAHQ8N8S7 591 aaPredicted RBP7.85□□□□□ -1.15
ATXN3-236ENST00000556220 FEZF2Q8TBJ5 459 aa7.85□□□□□ -1.15
ATXN3-236ENST00000556220 SLC22A17Q8WUG5 538 aa7.85□□□□□ -1.15
ATXN3-236ENST00000556220 TNPO1Q92973 898 aaKnown RBP7.85□□□□□ -1.15
ATXN3-236ENST00000556220 PSMG3-AS1Q96PY0 264 aa7.85□□□□□ -1.15
ATXN3-236ENST00000556220 TBC1D17Q9HA65 648 aa7.85□□□□□ -1.15
ATXN3-236ENST00000556220 RALYQ9UKM9 306 aaKnown RBP7.85□□□□□ -1.15
ATXN3-236ENST00000556220 ST3GAL5Q9UNP4 418 aa7.85□□□□□ -1.15
ATXN3-236ENST00000556220 SIT1Q9Y3P8 196 aa7.85□□□□□ -1.15
ATXN3-236ENST00000556220 ZFYVE26Q68DK2 2539 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms