RNA–Protein interactions for RNA: ENST00000556210.1

CUX1-215, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,044 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-215ENST00000556210 KRT17Q04695 432 aa15.86■□□□□ 0.13
CUX1-215ENST00000556210 CPNE8Q86YQ8 564 aa15.86■□□□□ 0.13
CUX1-215ENST00000556210 ISCUQ9H1K1 167 aa15.86■□□□□ 0.13
CUX1-215ENST00000556210 ATP6V0A4Q9HBG4 840 aa15.86■□□□□ 0.13
CUX1-215ENST00000556210 HAUS2Q9NVX0 235 aa15.86■□□□□ 0.13
CUX1-215ENST00000556210 ASTN2O75129 1339 aaPredicted RBP15.86■□□□□ 0.13
CUX1-215ENST00000556210 COL18A1P39060 1754 aa15.86■□□□□ 0.13
CUX1-215ENST00000556210 MYH14Q7Z406 1995 aaKnown RBP15.86■□□□□ 0.13
CUX1-215ENST00000556210 ICAM1P05362 532 aa15.86■□□□□ 0.13
CUX1-215ENST00000556210 TMEM253P0C7T8 217 aa15.86■□□□□ 0.13
CUX1-215ENST00000556210 VCAM1P19320 739 aa15.86■□□□□ 0.13
CUX1-215ENST00000556210 GNA15P30679 374 aa15.86■□□□□ 0.13
CUX1-215ENST00000556210 CLK2P49760 499 aaKnown RBP15.86■□□□□ 0.13
CUX1-215ENST00000556210 PPATQ06203 517 aa15.86■□□□□ 0.13
CUX1-215ENST00000556210 PRUNE1Q86TP1 453 aa15.86■□□□□ 0.13
CUX1-215ENST00000556210 SULF1Q8IWU6 871 aa15.86■□□□□ 0.13
CUX1-215ENST00000556210 CYFIP2Q96F07 1278 aa15.86■□□□□ 0.13
CUX1-215ENST00000556210 YY1AP1Q9H869 796 aa15.86■□□□□ 0.13
CUX1-215ENST00000556210 SLC9A2Q9UBY0 812 aa15.86■□□□□ 0.13
CUX1-215ENST00000556210 HACL1Q9UJ83 578 aa15.86■□□□□ 0.13
CUX1-215ENST00000556210 PRLRP16471 622 aa15.85■□□□□ 0.13
CUX1-215ENST00000556210 UGCGQ16739 394 aa15.85■□□□□ 0.13
CUX1-215ENST00000556210 DNAJC24Q6P3W2 148 aa15.85■□□□□ 0.13
CUX1-215ENST00000556210 DLK2Q6UY11 383 aa15.85■□□□□ 0.13
CUX1-215ENST00000556210 TBC1D1Q86TI0 1168 aaPredicted RBP15.85■□□□□ 0.13
CUX1-215ENST00000556210 PPP1R14CQ8TAE6 165 aa15.85■□□□□ 0.13
CUX1-215ENST00000556210 RSAD2Q8WXG1 361 aa15.85■□□□□ 0.13
CUX1-215ENST00000556210 RIT2Q99578 217 aa15.85■□□□□ 0.13
CUX1-215ENST00000556210 SEMA4AQ9H3S1 761 aa15.85■□□□□ 0.13
CUX1-215ENST00000556210 OLFML3Q9NRN5 406 aa15.85■□□□□ 0.13
CUX1-215ENST00000556210 HOMER3Q9NSC5 361 aa15.85■□□□□ 0.13
CUX1-215ENST00000556210 VAV3Q9UKW4 847 aa15.85■□□□□ 0.13
CUX1-215ENST00000556210 TBX20Q9UMR3 447 aa15.85■□□□□ 0.13
CUX1-215ENST00000556210 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.85■□□□□ 0.13
CUX1-215ENST00000556210 CAND2O75155 1236 aa15.85■□□□□ 0.13
CUX1-215ENST00000556210 FAM107AO95990 144 aa15.85■□□□□ 0.13
CUX1-215ENST00000556210 SLC8A1P32418 973 aa15.85■□□□□ 0.13
CUX1-215ENST00000556210 JAK3P52333 1124 aa15.85■□□□□ 0.13
CUX1-215ENST00000556210 SMTNL2Q2TAL5 461 aa15.85■□□□□ 0.13
CUX1-215ENST00000556210 SV2AQ7L0J3 742 aa15.85■□□□□ 0.13
CUX1-215ENST00000556210 SUGP1Q8IWZ8 645 aaKnown RBP15.85■□□□□ 0.13
CUX1-215ENST00000556210 PPP1R13LQ8WUF5 828 aa15.85■□□□□ 0.13
CUX1-215ENST00000556210 ERP44Q9BS26 406 aa15.85■□□□□ 0.13
CUX1-215ENST00000556210 PARP2Q9UGN5 583 aa15.85■□□□□ 0.13
CUX1-215ENST00000556210 SYNGAP1Q96PV0 1343 aa15.85■□□□□ 0.13
CUX1-215ENST00000556210 CICQ96RK0 1608 aaPredicted RBP15.85■□□□□ 0.13
CUX1-215ENST00000556210 IGKV6D-41A0A0C4DH26 115 aa15.85■□□□□ 0.13
CUX1-215ENST00000556210 RTN2O75298 545 aa15.85■□□□□ 0.13
CUX1-215ENST00000556210 SPAG7O75391 227 aa15.85■□□□□ 0.13
CUX1-215ENST00000556210 PIAS1O75925 651 aa15.85■□□□□ 0.13
CUX1-215ENST00000556210 KRT10P13645 584 aa15.85■□□□□ 0.13
CUX1-215ENST00000556210 RRM1P23921 792 aa15.85■□□□□ 0.13
CUX1-215ENST00000556210 HNRNPH3P31942 346 aaKnown RBP15.85■□□□□ 0.13
CUX1-215ENST00000556210 KDM7AQ6ZMT4 941 aa15.85■□□□□ 0.13
CUX1-215ENST00000556210 NT5DC3Q86UY8 548 aa15.85■□□□□ 0.13
CUX1-215ENST00000556210 RUBCNQ92622 972 aa15.85■□□□□ 0.13
CUX1-215ENST00000556210 AKT3Q9Y243 479 aa15.85■□□□□ 0.13
CUX1-215ENST00000556210 EIF3DO15371 548 aaKnown RBP eCLIP15.84■□□□□ 0.13
CUX1-215ENST00000556210 BASP1P80723 227 aaKnown RBP15.84■□□□□ 0.13
CUX1-215ENST00000556210 PPP2R5AQ15172 486 aa15.84■□□□□ 0.13
CUX1-215ENST00000556210 HHATQ5VTY9 493 aa15.84■□□□□ 0.13
CUX1-215ENST00000556210 RPAINQ86UA6 219 aa15.84■□□□□ 0.13
CUX1-215ENST00000556210 GPD1LQ8N335 351 aa15.84■□□□□ 0.13
CUX1-215ENST00000556210 RNF149Q8NC42 400 aa15.84■□□□□ 0.13
CUX1-215ENST00000556210 MICAL1Q8TDZ2 1067 aa15.84■□□□□ 0.13
CUX1-215ENST00000556210 EPS8L3Q8TE67 593 aaKnown RBP15.84■□□□□ 0.13
CUX1-215ENST00000556210 HSPH1Q92598 858 aa15.84■□□□□ 0.13
CUX1-215ENST00000556210 ALG13Q9NP73 1137 aaKnown RBP15.84■□□□□ 0.13
CUX1-215ENST00000556210 NRBP2Q9NSY0 501 aa15.84■□□□□ 0.13
CUX1-215ENST00000556210 TUBGCP6Q96RT7 1819 aa15.84■□□□□ 0.13
CUX1-215ENST00000556210 EIF4E1BA6NMX2 242 aaKnown RBP15.84■□□□□ 0.13
CUX1-215ENST00000556210 PJA2O43164 708 aa15.84■□□□□ 0.13
CUX1-215ENST00000556210 PYGMP11217 842 aa15.84■□□□□ 0.13
CUX1-215ENST00000556210 ERFP50548 548 aa15.84■□□□□ 0.13
CUX1-215ENST00000556210 CASC4Q6P4E1 433 aa15.84■□□□□ 0.13
CUX1-215ENST00000556210 ZBTB8OSQ8IWT0 167 aa15.84■□□□□ 0.13
CUX1-215ENST00000556210 HVCN1Q96D96 273 aa15.84■□□□□ 0.13
CUX1-215ENST00000556210 SAYSD1Q9NPB0 183 aa15.84■□□□□ 0.13
CUX1-215ENST00000556210 ZNF302Q9NR11 478 aa15.84■□□□□ 0.13
CUX1-215ENST00000556210 COL20A1Q9P218 1284 aa15.84■□□□□ 0.13
CUX1-215ENST00000556210 SUCLA2Q9P2R7 463 aaPredicted RBP15.84■□□□□ 0.13
CUX1-215ENST00000556210 IGSF9BQ9UPX0 1349 aa15.84■□□□□ 0.13
CUX1-215ENST00000556210 CRYBG1Q9Y4K1 1723 aa15.84■□□□□ 0.13
CUX1-215ENST00000556210 BBS9Q3SYG4 887 aa15.84■□□□□ 0.13
CUX1-215ENST00000556210 STYK1Q6J9G0 422 aa15.84■□□□□ 0.13
CUX1-215ENST00000556210 PARP9Q8IXQ6 854 aa15.84■□□□□ 0.13
CUX1-215ENST00000556210 KAT2BQ92831 832 aa15.84■□□□□ 0.13
CUX1-215ENST00000556210 ARHGEF2Q92974 986 aaKnown RBP15.84■□□□□ 0.13
CUX1-215ENST00000556210 PWWP2AQ96N64 755 aa15.84■□□□□ 0.13
CUX1-215ENST00000556210 PRMT1Q99873 361 aaKnown RBP15.84■□□□□ 0.13
CUX1-215ENST00000556210 PDCD2LQ9BRP1 358 aa15.84■□□□□ 0.13
CUX1-215ENST00000556210 SLITRK6Q9H5Y7 841 aa15.84■□□□□ 0.13
CUX1-215ENST00000556210 SLC40A1Q9NP59 571 aa15.84■□□□□ 0.13
CUX1-215ENST00000556210 RNF19AQ9NV58 838 aa15.84■□□□□ 0.13
CUX1-215ENST00000556210 PCDHGC5Q9Y5F6 944 aa15.84■□□□□ 0.13
CUX1-215ENST00000556210 MIF4GDA9UHW6 222 aaKnown RBP15.84■□□□□ 0.13
CUX1-215ENST00000556210 YARSP54577 528 aaKnown RBP15.84■□□□□ 0.13
CUX1-215ENST00000556210 STXBP2Q15833 593 aa15.84■□□□□ 0.13
CUX1-215ENST00000556210 MOXD1Q6UVY6 613 aa15.84■□□□□ 0.13
CUX1-215ENST00000556210 NOP9Q86U38 636 aaKnown RBP15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms