RNA–Protein interactions for RNA: ENST00000556166.2

GABRB3-210, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 1,583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-210ENST00000556166 PCDHB7Q9Y5E2 793 aa12.52□□□□□ -0.41
GABRB3-210ENST00000556166 SLC4A7Q9Y6M7 1214 aa12.52□□□□□ -0.41
GABRB3-210ENST00000556166 PSMA7O14818 248 aa12.51□□□□□ -0.41
GABRB3-210ENST00000556166 OFD1O75665 1012 aa12.51□□□□□ -0.41
GABRB3-210ENST00000556166 SKIP12755 728 aa12.51□□□□□ -0.41
GABRB3-210ENST00000556166 ITGA4P13612 1032 aa12.51□□□□□ -0.41
GABRB3-210ENST00000556166 KCNJ6P48051 423 aa12.51□□□□□ -0.41
GABRB3-210ENST00000556166 RAB27AP51159 221 aa12.51□□□□□ -0.41
GABRB3-210ENST00000556166 PAK1Q13153 545 aa12.51□□□□□ -0.41
GABRB3-210ENST00000556166 ENOX2Q16206 610 aaKnown RBP12.51□□□□□ -0.41
GABRB3-210ENST00000556166 NFIL3Q16649 462 aa12.51□□□□□ -0.41
GABRB3-210ENST00000556166 LRRC55Q6ZSA7 311 aa12.51□□□□□ -0.41
GABRB3-210ENST00000556166 CBWD2Q8IUF1 395 aa12.51□□□□□ -0.41
GABRB3-210ENST00000556166 ZC3H3Q8IXZ2 948 aaKnown RBP12.51□□□□□ -0.41
GABRB3-210ENST00000556166 GOLGA5Q8TBA6 731 aa12.51□□□□□ -0.41
GABRB3-210ENST00000556166 RNPC3Q96LT9 517 aaKnown RBP12.51□□□□□ -0.41
GABRB3-210ENST00000556166 ZFP42Q96MM3 310 aa12.51□□□□□ -0.41
GABRB3-210ENST00000556166 CASD1Q96PB1 797 aa12.51□□□□□ -0.41
GABRB3-210ENST00000556166 DNAJC25Q9H1X3 360 aa12.51□□□□□ -0.41
GABRB3-210ENST00000556166 ANO10Q9NW15 660 aa12.51□□□□□ -0.41
GABRB3-210ENST00000556166 CGNQ9P2M7 1197 aaKnown RBP12.51□□□□□ -0.41
GABRB3-210ENST00000556166 PARP2Q9UGN5 583 aa12.51□□□□□ -0.41
GABRB3-210ENST00000556166 RWDD2AQ9UIY3 292 aa12.51□□□□□ -0.41
GABRB3-210ENST00000556166 LAMA2P24043 3122 aaKnown RBP12.5□□□□□ -0.41
GABRB3-210ENST00000556166 CALUO43852 315 aaPredicted RBP12.5□□□□□ -0.41
GABRB3-210ENST00000556166 EXTL3O43909 919 aa12.5□□□□□ -0.41
GABRB3-210ENST00000556166 DGKIO75912 1065 aa12.5□□□□□ -0.41
GABRB3-210ENST00000556166 RECQL4O94761 1208 aa12.5□□□□□ -0.41
GABRB3-210ENST00000556166 ADRB2P07550 413 aa12.5□□□□□ -0.41
GABRB3-210ENST00000556166 CLTAP09496 248 aa12.5□□□□□ -0.41
GABRB3-210ENST00000556166 CXCL8P10145 99 aa12.5□□□□□ -0.41
GABRB3-210ENST00000556166 ATP2A2P16615 1042 aaKnown RBP12.5□□□□□ -0.41
GABRB3-210ENST00000556166 RABGGTBP53611 331 aa12.5□□□□□ -0.41
GABRB3-210ENST00000556166 ADAM9Q13443 819 aa12.5□□□□□ -0.41
GABRB3-210ENST00000556166 STIM1Q13586 685 aa12.5□□□□□ -0.41
GABRB3-210ENST00000556166 STX1AQ16623 288 aa12.5□□□□□ -0.41
GABRB3-210ENST00000556166 EDRF1Q3B7T1 1238 aa12.5□□□□□ -0.41
GABRB3-210ENST00000556166 HERC6Q8IVU3 1022 aa12.5□□□□□ -0.41
GABRB3-210ENST00000556166 TMEM130Q8N3G9 435 aa12.5□□□□□ -0.41
GABRB3-210ENST00000556166 RDH13Q8NBN7 331 aa12.5□□□□□ -0.41
GABRB3-210ENST00000556166 PHOSPHO2Q8TCD6 241 aa12.5□□□□□ -0.41
GABRB3-210ENST00000556166 HELQQ8TDG4 1101 aa12.5□□□□□ -0.41
GABRB3-210ENST00000556166 ZNF689Q96CS4 500 aaPredicted RBP12.5□□□□□ -0.41
GABRB3-210ENST00000556166 ACAP3Q96P50 834 aa12.5□□□□□ -0.41
GABRB3-210ENST00000556166 GAD1Q99259 594 aa12.5□□□□□ -0.41
GABRB3-210ENST00000556166 PLAGL2Q9UPG8 496 aa12.5□□□□□ -0.41
GABRB3-210ENST00000556166 TTC3P53804 2025 aa12.5□□□□□ -0.41
GABRB3-210ENST00000556166 TTC26A0AVF1 554 aa12.49□□□□□ -0.41
GABRB3-210ENST00000556166 ARL5CA6NH57 179 aa12.49□□□□□ -0.41
GABRB3-210ENST00000556166 LACTBL1A8MY62 500 aa12.49□□□□□ -0.41
GABRB3-210ENST00000556166 INPPL1O15357 1258 aa12.49□□□□□ -0.41
GABRB3-210ENST00000556166 AKAP3O75969 853 aa12.49□□□□□ -0.41
GABRB3-210ENST00000556166 GJB5O95377 273 aa12.49□□□□□ -0.41
GABRB3-210ENST00000556166 MYOGP15173 224 aa12.49□□□□□ -0.41
GABRB3-210ENST00000556166 NR2F2P24468 414 aa12.49□□□□□ -0.41
GABRB3-210ENST00000556166 ERCC5P28715 1186 aaPredicted RBP12.49□□□□□ -0.41
GABRB3-210ENST00000556166 PPP1R2P41236 205 aa12.49□□□□□ -0.41
GABRB3-210ENST00000556166 LRRC63Q05C16 580 aa12.49□□□□□ -0.41
GABRB3-210ENST00000556166 MYBPC2Q14324 1141 aa12.49□□□□□ -0.41
GABRB3-210ENST00000556166 ANO6Q4KMQ2 910 aa12.49□□□□□ -0.41
GABRB3-210ENST00000556166 XKR4Q5GH76 650 aa12.49□□□□□ -0.41
GABRB3-210ENST00000556166 APBB1IPQ7Z5R6 666 aaPredicted RBP12.49□□□□□ -0.41
GABRB3-210ENST00000556166 GPD1LQ8N335 351 aa12.49□□□□□ -0.41
GABRB3-210ENST00000556166 XXYLT1Q8NBI6 393 aa12.49□□□□□ -0.41
GABRB3-210ENST00000556166 PLEKHO2Q8TD55 490 aa12.49□□□□□ -0.41
GABRB3-210ENST00000556166 PGBD4Q96DM1 585 aa12.49□□□□□ -0.41
GABRB3-210ENST00000556166 BORCS6Q96GS4 357 aa12.49□□□□□ -0.41
GABRB3-210ENST00000556166 FAM84AQ96KN4 292 aa12.49□□□□□ -0.41
GABRB3-210ENST00000556166 ZMAT2Q96NC0 199 aaKnown RBP12.49□□□□□ -0.41
GABRB3-210ENST00000556166 CCDC94Q9BW85 323 aaPredicted RBP12.49□□□□□ -0.41
GABRB3-210ENST00000556166 RC3H2Q9HBD1 1191 aaKnown RBP12.49□□□□□ -0.41
GABRB3-210ENST00000556166 HCSTQ9UBK5 93 aa12.49□□□□□ -0.41
GABRB3-210ENST00000556166 LRFN2Q9ULH4 789 aa12.49□□□□□ -0.41
GABRB3-210ENST00000556166 COLQQ9Y215 455 aaPredicted RBP12.49□□□□□ -0.41
GABRB3-210ENST00000556166 GIT1Q9Y2X7 761 aa12.49□□□□□ -0.41
GABRB3-210ENST00000556166 PTGESO14684 152 aa12.48□□□□□ -0.41
GABRB3-210ENST00000556166 B4GALT3O60512 393 aa12.48□□□□□ -0.41
GABRB3-210ENST00000556166 EXOC3O60645 756 aa12.48□□□□□ -0.41
GABRB3-210ENST00000556166 CCDC192P0DO97 292 aa12.48□□□□□ -0.41
GABRB3-210ENST00000556166 MLH1P40692 756 aa12.48□□□□□ -0.41
GABRB3-210ENST00000556166 HTRA4P83105 476 aaPredicted RBP12.48□□□□□ -0.41
GABRB3-210ENST00000556166 SPAG1Q07617 926 aa12.48□□□□□ -0.41
GABRB3-210ENST00000556166 SNRNP35Q16560 246 aaKnown RBP12.48□□□□□ -0.41
GABRB3-210ENST00000556166 SCARA3Q6AZY7 606 aa12.48□□□□□ -0.41
GABRB3-210ENST00000556166 FOXR2Q6PJQ5 311 aa12.48□□□□□ -0.41
GABRB3-210ENST00000556166 IRF2BP1Q8IU81 584 aa12.48□□□□□ -0.41
GABRB3-210ENST00000556166 TDHQ8IZJ6 230 aa12.48□□□□□ -0.41
GABRB3-210ENST00000556166 NOC3LQ8WTT2 800 aaKnown RBP12.48□□□□□ -0.41
GABRB3-210ENST00000556166 SNX27Q96L92 541 aa12.48□□□□□ -0.41
GABRB3-210ENST00000556166 MFSD14AQ96MC6 490 aa12.48□□□□□ -0.41
GABRB3-210ENST00000556166 SLC9A7Q96T83 725 aa12.48□□□□□ -0.41
GABRB3-210ENST00000556166 RSAD1Q9HA92 442 aa12.48□□□□□ -0.41
GABRB3-210ENST00000556166 SMIM28A0A1B0GU29 152 aa12.47□□□□□ -0.41
GABRB3-210ENST00000556166 LCHNA4D1U4 455 aa12.47□□□□□ -0.41
GABRB3-210ENST00000556166 ZNF233A6NK53 670 aa12.47□□□□□ -0.41
GABRB3-210ENST00000556166 TBKBP1A7MCY6 615 aa12.47□□□□□ -0.41
GABRB3-210ENST00000556166 KIAA0391O15091 583 aaKnown RBP12.47□□□□□ -0.41
GABRB3-210ENST00000556166 ARHGEF15O94989 841 aa12.47□□□□□ -0.41
GABRB3-210ENST00000556166 FKBP3Q00688 224 aaKnown RBP12.47□□□□□ -0.41
GABRB3-210ENST00000556166 CYP24A1Q07973 514 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms