RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 LRRC43Q8N309 656 aa11.6□□□□□ -0.55
TMEM260-206ENST00000555046 TMEM87AQ8NBN3 555 aa11.6□□□□□ -0.55
TMEM260-206ENST00000555046 TIGD1Q96MW7 591 aa11.6□□□□□ -0.55
TMEM260-206ENST00000555046 CASD1Q96PB1 797 aa11.6□□□□□ -0.55
TMEM260-206ENST00000555046 C11orf84Q9BUA3 381 aaPredicted RBP11.6□□□□□ -0.55
TMEM260-206ENST00000555046 CCDC94Q9BW85 323 aaPredicted RBP11.6□□□□□ -0.55
TMEM260-206ENST00000555046 TARS2Q9BW92 718 aaKnown RBP11.6□□□□□ -0.55
TMEM260-206ENST00000555046 PDZD7Q9H5P4 517 aa11.6□□□□□ -0.55
TMEM260-206ENST00000555046 LMCD1Q9NZU5 365 aa11.6□□□□□ -0.55
TMEM260-206ENST00000555046 PUF60Q9UHX1 559 aaKnown RBP11.6□□□□□ -0.55
TMEM260-206ENST00000555046 TET1Q8NFU7 2136 aa11.59□□□□□ -0.55
TMEM260-206ENST00000555046 EVPLQ92817 2033 aa11.59□□□□□ -0.55
TMEM260-206ENST00000555046 ZMYM2Q9UBW7 1377 aa11.59□□□□□ -0.55
TMEM260-206ENST00000555046 C5orf67F2Z3F1 127 aa11.59□□□□□ -0.55
TMEM260-206ENST00000555046 HNRNPDLO14979 420 aaKnown RBP11.59□□□□□ -0.55
TMEM260-206ENST00000555046 ACTN4O43707 911 aaKnown RBP11.59□□□□□ -0.55
TMEM260-206ENST00000555046 SMC2O95347 1197 aa11.59□□□□□ -0.55
TMEM260-206ENST00000555046 PIGRP01833 764 aa11.59□□□□□ -0.55
TMEM260-206ENST00000555046 ALDH2P05091 517 aa11.59□□□□□ -0.55
TMEM260-206ENST00000555046 FGFR1P11362 822 aa11.59□□□□□ -0.55
TMEM260-206ENST00000555046 NMT1P30419 496 aaKnown RBP11.59□□□□□ -0.55
TMEM260-206ENST00000555046 PPM1AP35813 382 aa11.59□□□□□ -0.55
TMEM260-206ENST00000555046 UBE2HP62256 183 aa11.59□□□□□ -0.55
TMEM260-206ENST00000555046 SNRPFP62306 86 aaKnown RBP11.59□□□□□ -0.55
TMEM260-206ENST00000555046 POU5F1Q01860 360 aaKnown RBP11.59□□□□□ -0.55
TMEM260-206ENST00000555046 PTPROQ16827 1216 aa11.59□□□□□ -0.55
TMEM260-206ENST00000555046 ZNF568Q3ZCX4 644 aa11.59□□□□□ -0.55
TMEM260-206ENST00000555046 TPRNQ4KMQ1 711 aa11.59□□□□□ -0.55
TMEM260-206ENST00000555046 L1TD1Q5T7N2 865 aaKnown RBP11.59□□□□□ -0.55
TMEM260-206ENST00000555046 MAP4K3Q8IVH8 894 aa11.59□□□□□ -0.55
TMEM260-206ENST00000555046 SMG8Q8ND04 991 aaKnown RBP11.59□□□□□ -0.55
TMEM260-206ENST00000555046 FBXO22Q8NEZ5 403 aa11.59□□□□□ -0.55
TMEM260-206ENST00000555046 ARNTL2Q8WYA1 636 aa11.59□□□□□ -0.55
TMEM260-206ENST00000555046 STAMQ92783 540 aa11.59□□□□□ -0.55
TMEM260-206ENST00000555046 P2RX5Q93086 422 aa11.59□□□□□ -0.55
TMEM260-206ENST00000555046 CHAMP1Q96JM3 812 aa11.59□□□□□ -0.55
TMEM260-206ENST00000555046 ACAP3Q96P50 834 aa11.59□□□□□ -0.55
TMEM260-206ENST00000555046 RPS6KC1Q96S38 1066 aa11.59□□□□□ -0.55
TMEM260-206ENST00000555046 TSPAN18Q96SJ8 248 aa11.59□□□□□ -0.55
TMEM260-206ENST00000555046 EIF2AQ9BY44 585 aaKnown RBP11.59□□□□□ -0.55
TMEM260-206ENST00000555046 RC3H2Q9HBD1 1191 aaKnown RBP11.59□□□□□ -0.55
TMEM260-206ENST00000555046 PTPRHQ9HD43 1115 aa11.59□□□□□ -0.55
TMEM260-206ENST00000555046 TYW1Q9NV66 732 aaKnown RBP11.59□□□□□ -0.55
TMEM260-206ENST00000555046 EXOC1Q9NV70 894 aa11.59□□□□□ -0.55
TMEM260-206ENST00000555046 DMXL1Q9Y485 3027 aa11.59□□□□□ -0.55
TMEM260-206ENST00000555046 WDR87Q6ZQQ6 2873 aa11.58□□□□□ -0.56
TMEM260-206ENST00000555046 LCHNA4D1U4 455 aa11.58□□□□□ -0.56
TMEM260-206ENST00000555046 KIAA0391O15091 583 aaKnown RBP11.58□□□□□ -0.56
TMEM260-206ENST00000555046 INPPL1O15357 1258 aa11.58□□□□□ -0.56
TMEM260-206ENST00000555046 EIF3DO15371 548 aaKnown RBP eCLIP11.58□□□□□ -0.56
TMEM260-206ENST00000555046 KINO60870 393 aaKnown RBP11.58□□□□□ -0.56
TMEM260-206ENST00000555046 CLTAP09496 248 aa11.58□□□□□ -0.56
TMEM260-206ENST00000555046 ATF7P17544 494 aaPredicted RBP11.58□□□□□ -0.56
TMEM260-206ENST00000555046 PROZP22891 400 aa11.58□□□□□ -0.56
TMEM260-206ENST00000555046 GRM5P41594 1212 aa11.58□□□□□ -0.56
TMEM260-206ENST00000555046 MCL1Q07820 350 aa11.58□□□□□ -0.56
TMEM260-206ENST00000555046 COASYQ13057 564 aa11.58□□□□□ -0.56
TMEM260-206ENST00000555046 PAN2Q504Q3 1202 aaKnown RBP11.58□□□□□ -0.56
TMEM260-206ENST00000555046 EPC2Q52LR7 807 aa11.58□□□□□ -0.56
TMEM260-206ENST00000555046 FAM26FQ5R3K3 315 aa11.58□□□□□ -0.56
TMEM260-206ENST00000555046 AGMOQ6ZNB7 445 aa11.58□□□□□ -0.56
TMEM260-206ENST00000555046 TAS1R3Q7RTX0 852 aa11.58□□□□□ -0.56
TMEM260-206ENST00000555046 ERMP1Q7Z2K6 904 aa11.58□□□□□ -0.56
TMEM260-206ENST00000555046 CD302Q8IX05 232 aa11.58□□□□□ -0.56
TMEM260-206ENST00000555046 FMR1NBQ8N0W7 255 aaPredicted RBP11.58□□□□□ -0.56
TMEM260-206ENST00000555046 HELQQ8TDG4 1101 aa11.58□□□□□ -0.56
TMEM260-206ENST00000555046 COL26A1Q96A83 441 aa11.58□□□□□ -0.56
TMEM260-206ENST00000555046 FIZ1Q96SL8 496 aa11.58□□□□□ -0.56
TMEM260-206ENST00000555046 STRA6Q9BX79 667 aa11.58□□□□□ -0.56
TMEM260-206ENST00000555046 PLEKHA5Q9HAU0 1116 aa11.58□□□□□ -0.56
TMEM260-206ENST00000555046 SLC38A7Q9NVC3 462 aa11.58□□□□□ -0.56
TMEM260-206ENST00000555046 RMND1Q9NWS8 449 aa11.58□□□□□ -0.56
TMEM260-206ENST00000555046 TBC1D7Q9P0N9 293 aa11.58□□□□□ -0.56
TMEM260-206ENST00000555046 CGNQ9P2M7 1197 aaKnown RBP11.58□□□□□ -0.56
TMEM260-206ENST00000555046 FASNP49327 2511 aaKnown RBP11.58□□□□□ -0.56
TMEM260-206ENST00000555046 MAP1BP46821 2468 aaKnown RBP11.58□□□□□ -0.56
TMEM260-206ENST00000555046 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.57□□□□□ -0.56
TMEM260-206ENST00000555046 ARL5CA6NH57 179 aa11.57□□□□□ -0.56
TMEM260-206ENST00000555046 H3BNC9 293 aa11.57□□□□□ -0.56
TMEM260-206ENST00000555046 PRPF40AO75400 957 aaKnown RBP11.57□□□□□ -0.56
TMEM260-206ENST00000555046 LDHAP00338 332 aaKnown RBP11.57□□□□□ -0.56
TMEM260-206ENST00000555046 RPN1P04843 607 aaKnown RBP11.57□□□□□ -0.56
TMEM260-206ENST00000555046 THP07101 528 aa11.57□□□□□ -0.56
TMEM260-206ENST00000555046 CTNNB1P35222 781 aa11.57□□□□□ -0.56
TMEM260-206ENST00000555046 UBE3AQ05086 875 aa11.57□□□□□ -0.56
TMEM260-206ENST00000555046 CUL4BQ13620 913 aa11.57□□□□□ -0.56
TMEM260-206ENST00000555046 NOLC1Q14978 699 aaKnown RBP eCLIP11.57□□□□□ -0.56
TMEM260-206ENST00000555046 SKIV2LQ15477 1246 aaKnown RBP11.57□□□□□ -0.56
TMEM260-206ENST00000555046 CLLU1OSQ5K130 101 aa11.57□□□□□ -0.56
TMEM260-206ENST00000555046 PDE12Q6L8Q7 609 aaKnown RBP11.57□□□□□ -0.56
TMEM260-206ENST00000555046 ZBTB33Q86T24 672 aa11.57□□□□□ -0.56
TMEM260-206ENST00000555046 ENGASEQ8NFI3 743 aa11.57□□□□□ -0.56
TMEM260-206ENST00000555046 GOLGA5Q8TBA6 731 aa11.57□□□□□ -0.56
TMEM260-206ENST00000555046 LPPQ93052 612 aa11.57□□□□□ -0.56
TMEM260-206ENST00000555046 ZNF558Q96NG5 402 aa11.57□□□□□ -0.56
TMEM260-206ENST00000555046 GSDMAQ96QA5 445 aa11.57□□□□□ -0.56
TMEM260-206ENST00000555046 GAD1Q99259 594 aa11.57□□□□□ -0.56
TMEM260-206ENST00000555046 TMEM175Q9BSA9 504 aa11.57□□□□□ -0.56
TMEM260-206ENST00000555046 MSTO1Q9BUK6 570 aa11.57□□□□□ -0.56
TMEM260-206ENST00000555046 APOL6Q9BWW8 343 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms