RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 PFKFB2O60825 505 aa7.26□□□□□ -1.25
SYNE2-216ENST00000555002 HAUS5O94927 633 aa7.26□□□□□ -1.25
SYNE2-216ENST00000555002 KRT31Q15323 416 aa7.26□□□□□ -1.25
SYNE2-216ENST00000555002 IFNEQ86WN2 208 aa7.26□□□□□ -1.25
SYNE2-216ENST00000555002 RBM41Q96IZ5 413 aaKnown RBP7.26□□□□□ -1.25
SYNE2-216ENST00000555002 ABCE1P61221 599 aaKnown RBP7.26□□□□□ -1.25
SYNE2-216ENST00000555002 RASGRF1Q13972 1273 aa7.26□□□□□ -1.25
SYNE2-216ENST00000555002 OTUD5Q96G74 571 aa7.26□□□□□ -1.25
SYNE2-216ENST00000555002 WRNIP1Q96S55 665 aa7.26□□□□□ -1.25
SYNE2-216ENST00000555002 CCDC3Q9BQI4 270 aa7.26□□□□□ -1.25
SYNE2-216ENST00000555002 OSBPL1AQ9BXW6 950 aa7.26□□□□□ -1.25
SYNE2-216ENST00000555002 USP17L5A8MUK1 530 aa7.25□□□□□ -1.25
SYNE2-216ENST00000555002 CDH2P19022 906 aaPredicted RBP7.25□□□□□ -1.25
SYNE2-216ENST00000555002 CHI3L1P36222 383 aaPredicted RBP7.25□□□□□ -1.25
SYNE2-216ENST00000555002 CDC16Q13042 620 aa7.25□□□□□ -1.25
SYNE2-216ENST00000555002 BEND6Q5SZJ8 279 aaPredicted RBP7.25□□□□□ -1.25
SYNE2-216ENST00000555002 UXS1Q8NBZ7 420 aa7.25□□□□□ -1.25
SYNE2-216ENST00000555002 ORAI2Q96SN7 254 aa7.25□□□□□ -1.25
SYNE2-216ENST00000555002 NFKBIZQ9BYH8 718 aa7.25□□□□□ -1.25
SYNE2-216ENST00000555002 CDC23Q9UJX2 597 aa7.25□□□□□ -1.25
SYNE2-216ENST00000555002 POLR1DQ9Y2S0 133 aa7.25□□□□□ -1.25
SYNE2-216ENST00000555002 RNF103O00237 685 aa7.25□□□□□ -1.25
SYNE2-216ENST00000555002 SASH1O94885 1247 aa7.25□□□□□ -1.25
SYNE2-216ENST00000555002 SERPINB4P48594 390 aa7.25□□□□□ -1.25
SYNE2-216ENST00000555002 SCRN1Q12765 414 aa7.25□□□□□ -1.25
SYNE2-216ENST00000555002 TTLL4Q14679 1199 aa7.25□□□□□ -1.25
SYNE2-216ENST00000555002 CCDC81Q6ZN84 652 aa7.25□□□□□ -1.25
SYNE2-216ENST00000555002 NT5DC4Q86YG4 428 aa7.25□□□□□ -1.25
SYNE2-216ENST00000555002 ANKMY2Q8IV38 441 aa7.25□□□□□ -1.25
SYNE2-216ENST00000555002 AGAP3Q96P47 875 aa7.25□□□□□ -1.25
SYNE2-216ENST00000555002 BRD8Q9H0E9 1235 aa7.25□□□□□ -1.25
SYNE2-216ENST00000555002 NSMCE4AQ9NXX6 385 aa7.25□□□□□ -1.25
SYNE2-216ENST00000555002 EHD2Q9NZN4 543 aa7.25□□□□□ -1.25
SYNE2-216ENST00000555002 DLGAP3O95886 979 aa7.25□□□□□ -1.25
SYNE2-216ENST00000555002 NR3C1P04150 777 aa7.25□□□□□ -1.25
SYNE2-216ENST00000555002 ENO1P06733 434 aaKnown RBP7.25□□□□□ -1.25
SYNE2-216ENST00000555002 USP39Q53GS9 565 aaKnown RBP7.25□□□□□ -1.25
SYNE2-216ENST00000555002 APOA5Q6Q788 366 aa7.25□□□□□ -1.25
SYNE2-216ENST00000555002 FAM196AQ6ZSG2 479 aa7.25□□□□□ -1.25
SYNE2-216ENST00000555002 YIPF3Q9GZM5 350 aa7.25□□□□□ -1.25
SYNE2-216ENST00000555002 NOP53Q9NZM5 478 aaKnown RBP7.25□□□□□ -1.25
SYNE2-216ENST00000555002 PDIA2Q13087 525 aaKnown RBP7.25□□□□□ -1.25
SYNE2-216ENST00000555002 BFSP2Q13515 415 aa7.25□□□□□ -1.25
SYNE2-216ENST00000555002 CCDC60Q8IWA6 550 aaPredicted RBP7.25□□□□□ -1.25
SYNE2-216ENST00000555002 ZBTB38Q8NAP3 1195 aaPredicted RBP7.25□□□□□ -1.25
SYNE2-216ENST00000555002 LEMD2Q8NC56 503 aa7.25□□□□□ -1.25
SYNE2-216ENST00000555002 GIMAP8Q8ND71 665 aaPredicted RBP7.25□□□□□ -1.25
SYNE2-216ENST00000555002 RABGGTAQ92696 567 aa7.25□□□□□ -1.25
SYNE2-216ENST00000555002 CCDC17Q96LX7 622 aa7.25□□□□□ -1.25
SYNE2-216ENST00000555002 MTIF3Q9H2K0 278 aaKnown RBP7.25□□□□□ -1.25
SYNE2-216ENST00000555002 RNPEPQ9H4A4 650 aa7.25□□□□□ -1.25
SYNE2-216ENST00000555002 OLFML3Q9NRN5 406 aa7.25□□□□□ -1.25
SYNE2-216ENST00000555002 CFAP43Q8NDM7 1665 aa7.25□□□□□ -1.25
SYNE2-216ENST00000555002 ZBTB7AO95365 584 aa7.25□□□□□ -1.25
SYNE2-216ENST00000555002 CDH6P55285 790 aa7.25□□□□□ -1.25
SYNE2-216ENST00000555002 AP3B2Q13367 1082 aa7.25□□□□□ -1.25
SYNE2-216ENST00000555002 TP53BP2Q13625 1128 aa7.25□□□□□ -1.25
SYNE2-216ENST00000555002 ALCAMQ13740 583 aa7.25□□□□□ -1.25
SYNE2-216ENST00000555002 CDKL3Q8IVW4 592 aaPredicted RBP7.25□□□□□ -1.25
SYNE2-216ENST00000555002 GSPT2Q8IYD1 628 aaKnown RBP7.25□□□□□ -1.25
SYNE2-216ENST00000555002 PSD3Q9NYI0 1048 aa7.25□□□□□ -1.25
SYNE2-216ENST00000555002 TNPO2O14787 897 aaKnown RBP7.25□□□□□ -1.25
SYNE2-216ENST00000555002 SESN2P58004 480 aaPredicted RBP7.25□□□□□ -1.25
SYNE2-216ENST00000555002 KLHL38Q2WGJ6 581 aa7.25□□□□□ -1.25
SYNE2-216ENST00000555002 RNF181Q9P0P0 153 aa7.25□□□□□ -1.25
SYNE2-216ENST00000555002 CTIFO43310 598 aaKnown RBP7.25□□□□□ -1.25
SYNE2-216ENST00000555002 FGAP02671 866 aa7.25□□□□□ -1.25
SYNE2-216ENST00000555002 CSNK2BP67870 215 aa7.25□□□□□ -1.25
SYNE2-216ENST00000555002 MAPRE1Q15691 268 aaKnown RBP7.25□□□□□ -1.25
SYNE2-216ENST00000555002 BTN2A1Q7KYR7 527 aa7.25□□□□□ -1.25
SYNE2-216ENST00000555002 FAM160B2Q86V87 743 aa7.25□□□□□ -1.25
SYNE2-216ENST00000555002 CDR2LQ86X02 465 aaPredicted RBP7.25□□□□□ -1.25
SYNE2-216ENST00000555002 ZBED8Q8IZ13 594 aa7.25□□□□□ -1.25
SYNE2-216ENST00000555002 THOC2Q8NI27 1593 aaKnown RBP7.25□□□□□ -1.25
SYNE2-216ENST00000555002 A8MXQ7 604 aa7.25□□□□□ -1.25
SYNE2-216ENST00000555002 GSTM1P09488 218 aa7.25□□□□□ -1.25
SYNE2-216ENST00000555002 BRAFP15056 766 aa7.25□□□□□ -1.25
SYNE2-216ENST00000555002 YWHAQP27348 245 aa7.25□□□□□ -1.25
SYNE2-216ENST00000555002 SLC25A24Q6NUK1 477 aa7.25□□□□□ -1.25
SYNE2-216ENST00000555002 PADI6Q6TGC4 694 aa7.25□□□□□ -1.25
SYNE2-216ENST00000555002 VPS50Q96JG6 964 aa7.25□□□□□ -1.25
SYNE2-216ENST00000555002 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.25□□□□□ -1.25
SYNE2-216ENST00000555002 ZMYM3Q14202 1370 aa7.25□□□□□ -1.25
SYNE2-216ENST00000555002 TOP2BQ02880 1626 aa7.25□□□□□ -1.25
SYNE2-216ENST00000555002 TBC1D9BQ66K14 1250 aa7.25□□□□□ -1.25
SYNE2-216ENST00000555002 SLC44A2Q8IWA5 706 aaPredicted RBP7.25□□□□□ -1.25
SYNE2-216ENST00000555002 BBS7Q8IWZ6 715 aa7.25□□□□□ -1.25
SYNE2-216ENST00000555002 PABPC5Q96DU9 382 aaKnown RBP7.25□□□□□ -1.25
SYNE2-216ENST00000555002 RSPH9Q9H1X1 276 aaPredicted RBP7.25□□□□□ -1.25
SYNE2-216ENST00000555002 BFARQ9NZS9 450 aa7.25□□□□□ -1.25
SYNE2-216ENST00000555002 SERPINB13Q9UIV8 391 aa7.25□□□□□ -1.25
SYNE2-216ENST00000555002 DEAF1O75398 565 aaPredicted RBP7.24□□□□□ -1.25
SYNE2-216ENST00000555002 CYP7B1O75881 506 aa7.24□□□□□ -1.25
SYNE2-216ENST00000555002 GUCY1A2P33402 732 aa7.24□□□□□ -1.25
SYNE2-216ENST00000555002 ASAP3Q8TDY4 903 aa7.24□□□□□ -1.25
SYNE2-216ENST00000555002 ENTPD7Q9NQZ7 604 aa7.24□□□□□ -1.25
SYNE2-216ENST00000555002 DNAJC12Q9UKB3 198 aa7.24□□□□□ -1.25
SYNE2-216ENST00000555002 POTEFA5A3E0 1075 aa7.24□□□□□ -1.25
SYNE2-216ENST00000555002 ALOX15P16050 662 aaPredicted RBP7.24□□□□□ -1.25
SYNE2-216ENST00000555002 ZNF211Q13398 564 aaPredicted RBP7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms