RNA–Protein interactions for RNA: ENST00000554997.1

SYNE2-215, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 711 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-215ENST00000554997 SMTNL1A8MU46 457 aa11.11□□□□□ -0.63
SYNE2-215ENST00000554997 IKBKBO14920 756 aa11.11□□□□□ -0.63
SYNE2-215ENST00000554997 MAPK13O15264 365 aa11.11□□□□□ -0.63
SYNE2-215ENST00000554997 AMHP03971 560 aa11.11□□□□□ -0.63
SYNE2-215ENST00000554997 ADRB2P07550 413 aa11.11□□□□□ -0.63
SYNE2-215ENST00000554997 ITGA4P13612 1032 aa11.11□□□□□ -0.63
SYNE2-215ENST00000554997 PSMC2P35998 433 aaKnown RBP11.11□□□□□ -0.63
SYNE2-215ENST00000554997 MAGEA10P43363 369 aaPredicted RBP11.11□□□□□ -0.63
SYNE2-215ENST00000554997 ACOT2P49753 483 aa11.11□□□□□ -0.63
SYNE2-215ENST00000554997 CYP2J2P51589 502 aa11.11□□□□□ -0.63
SYNE2-215ENST00000554997 ALKAL1Q6UXT8 129 aa11.11□□□□□ -0.63
SYNE2-215ENST00000554997 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.11□□□□□ -0.63
SYNE2-215ENST00000554997 CD302Q8IX05 232 aa11.11□□□□□ -0.63
SYNE2-215ENST00000554997 HACE1Q8IYU2 909 aa11.11□□□□□ -0.63
SYNE2-215ENST00000554997 RDH13Q8NBN7 331 aa11.11□□□□□ -0.63
SYNE2-215ENST00000554997 SAAL1Q96ER3 474 aa11.11□□□□□ -0.63
SYNE2-215ENST00000554997 MFSD14AQ96MC6 490 aa11.11□□□□□ -0.63
SYNE2-215ENST00000554997 GDF15Q99988 308 aa11.11□□□□□ -0.63
SYNE2-215ENST00000554997 FAM213AQ9BRX8 229 aa11.11□□□□□ -0.63
SYNE2-215ENST00000554997 CCDC94Q9BW85 323 aaPredicted RBP11.11□□□□□ -0.63
SYNE2-215ENST00000554997 TSPY26PQ9H489 355 aa11.11□□□□□ -0.63
SYNE2-215ENST00000554997 PLEKHA5Q9HAU0 1116 aa11.11□□□□□ -0.63
SYNE2-215ENST00000554997 SNTG2Q9NY99 539 aa11.11□□□□□ -0.63
SYNE2-215ENST00000554997 PCDH10Q9P2E7 1040 aa11.11□□□□□ -0.63
SYNE2-215ENST00000554997 GIT1Q9Y2X7 761 aa11.11□□□□□ -0.63
SYNE2-215ENST00000554997 HES2Q9Y543 173 aa11.11□□□□□ -0.63
SYNE2-215ENST00000554997 GOLGA8IPA6NC78 632 aa11.1□□□□□ -0.63
SYNE2-215ENST00000554997 GOLGA8JA6NMD2 632 aa11.1□□□□□ -0.63
SYNE2-215ENST00000554997 AKAP3O75969 853 aa11.1□□□□□ -0.63
SYNE2-215ENST00000554997 GNA14O95837 355 aa11.1□□□□□ -0.63
SYNE2-215ENST00000554997 HARSP12081 509 aaKnown RBP11.1□□□□□ -0.63
SYNE2-215ENST00000554997 AKAP5P24588 427 aa11.1□□□□□ -0.63
SYNE2-215ENST00000554997 BMP8BP34820 402 aa11.1□□□□□ -0.63
SYNE2-215ENST00000554997 YARSP54577 528 aaKnown RBP11.1□□□□□ -0.63
SYNE2-215ENST00000554997 OSTNP61366 133 aa11.1□□□□□ -0.63
SYNE2-215ENST00000554997 WDR5P61964 334 aaKnown RBP11.1□□□□□ -0.63
SYNE2-215ENST00000554997 MYL5Q02045 173 aa11.1□□□□□ -0.63
SYNE2-215ENST00000554997 IQCB1Q15051 598 aa11.1□□□□□ -0.63
SYNE2-215ENST00000554997 SNRNP35Q16560 246 aaKnown RBP11.1□□□□□ -0.63
SYNE2-215ENST00000554997 TPD52L1Q16890 204 aaPredicted RBP11.1□□□□□ -0.63
SYNE2-215ENST00000554997 SLC10A6Q3KNW5 377 aa11.1□□□□□ -0.63
SYNE2-215ENST00000554997 SEZ6Q53EL9 994 aa11.1□□□□□ -0.63
SYNE2-215ENST00000554997 XKR4Q5GH76 650 aa11.1□□□□□ -0.63
SYNE2-215ENST00000554997 ZBTB41Q5SVQ8 909 aa11.1□□□□□ -0.63
SYNE2-215ENST00000554997 RASIP1Q5U651 963 aa11.1□□□□□ -0.63
SYNE2-215ENST00000554997 AGMOQ6ZNB7 445 aa11.1□□□□□ -0.63
SYNE2-215ENST00000554997 LRRC55Q6ZSA7 311 aa11.1□□□□□ -0.63
SYNE2-215ENST00000554997 NPAS4Q8IUM7 802 aa11.1□□□□□ -0.63
SYNE2-215ENST00000554997 TMEM192Q8IY95 271 aa11.1□□□□□ -0.63
SYNE2-215ENST00000554997 CEP120Q8N960 986 aa11.1□□□□□ -0.63
SYNE2-215ENST00000554997 ZSWIM2Q8NEG5 633 aa11.1□□□□□ -0.63
SYNE2-215ENST00000554997 PHOSPHO2Q8TCD6 241 aa11.1□□□□□ -0.63
SYNE2-215ENST00000554997 NOC3LQ8WTT2 800 aaKnown RBP11.1□□□□□ -0.63
SYNE2-215ENST00000554997 TSPAN18Q96SJ8 248 aa11.1□□□□□ -0.63
SYNE2-215ENST00000554997 MKNK1Q9BUB5 465 aa11.1□□□□□ -0.63
SYNE2-215ENST00000554997 MTIF3Q9H2K0 278 aaKnown RBP11.1□□□□□ -0.63
SYNE2-215ENST00000554997 NXF3Q9H4D5 531 aaKnown RBP11.1□□□□□ -0.63
SYNE2-215ENST00000554997 RPF1Q9H9Y2 349 aaKnown RBP11.1□□□□□ -0.63
SYNE2-215ENST00000554997 TOPORSQ9NS56 1045 aaPredicted RBP11.1□□□□□ -0.63
SYNE2-215ENST00000554997 PARP2Q9UGN5 583 aa11.1□□□□□ -0.63
SYNE2-215ENST00000554997 DNAH12Q6ZR08 3092 aa11.1□□□□□ -0.63
SYNE2-215ENST00000554997 TTC26A0AVF1 554 aa11.09□□□□□ -0.63
SYNE2-215ENST00000554997 INPPL1O15357 1258 aa11.09□□□□□ -0.63
SYNE2-215ENST00000554997 SLC16A3O15427 465 aaKnown RBP11.09□□□□□ -0.63
SYNE2-215ENST00000554997 OFD1O75665 1012 aa11.09□□□□□ -0.63
SYNE2-215ENST00000554997 ATF7P17544 494 aaPredicted RBP11.09□□□□□ -0.63
SYNE2-215ENST00000554997 TNFSF9P41273 254 aa11.09□□□□□ -0.63
SYNE2-215ENST00000554997 KCNJ6P48051 423 aa11.09□□□□□ -0.63
SYNE2-215ENST00000554997 CASP4P49662 377 aa11.09□□□□□ -0.63
SYNE2-215ENST00000554997 ENPEPQ07075 957 aa11.09□□□□□ -0.63
SYNE2-215ENST00000554997 NCAPHQ15003 741 aa11.09□□□□□ -0.63
SYNE2-215ENST00000554997 SURF1Q15526 300 aa11.09□□□□□ -0.63
SYNE2-215ENST00000554997 ENOX2Q16206 610 aaKnown RBP11.09□□□□□ -0.63
SYNE2-215ENST00000554997 CEP135Q66GS9 1140 aa11.09□□□□□ -0.63
SYNE2-215ENST00000554997 FRMD5Q7Z6J6 570 aa11.09□□□□□ -0.63
SYNE2-215ENST00000554997 IRF2BP1Q8IU81 584 aa11.09□□□□□ -0.63
SYNE2-215ENST00000554997 CBWD2Q8IUF1 395 aa11.09□□□□□ -0.63
SYNE2-215ENST00000554997 DHX40Q8IX18 779 aaKnown RBP11.09□□□□□ -0.63
SYNE2-215ENST00000554997 RNF169Q8NCN4 708 aa11.09□□□□□ -0.63
SYNE2-215ENST00000554997 RSPH1Q8WYR4 309 aa11.09□□□□□ -0.63
SYNE2-215ENST00000554997 EEF2KMTQ96G04 330 aa11.09□□□□□ -0.63
SYNE2-215ENST00000554997 BORCS6Q96GS4 357 aa11.09□□□□□ -0.63
SYNE2-215ENST00000554997 THAP9Q9H5L6 903 aa11.09□□□□□ -0.63
SYNE2-215ENST00000554997 ASB7Q9H672 318 aa11.09□□□□□ -0.63
SYNE2-215ENST00000554997 CBX8Q9HC52 389 aa11.09□□□□□ -0.63
SYNE2-215ENST00000554997 METTL14Q9HCE5 456 aaKnown RBP11.09□□□□□ -0.63
SYNE2-215ENST00000554997 FANCLQ9NW38 375 aa11.09□□□□□ -0.63
SYNE2-215ENST00000554997 LRFN2Q9ULH4 789 aa11.09□□□□□ -0.63
SYNE2-215ENST00000554997 NFE2L3Q9Y4A8 694 aa11.09□□□□□ -0.63
SYNE2-215ENST00000554997 SLC4A7Q9Y6M7 1214 aa11.09□□□□□ -0.63
SYNE2-215ENST00000554997 MYH11P35749 1972 aa11.08□□□□□ -0.64
SYNE2-215ENST00000554997 ARL5CA6NH57 179 aa11.08□□□□□ -0.64
SYNE2-215ENST00000554997 LRRC10BA6NIK2 292 aa11.08□□□□□ -0.64
SYNE2-215ENST00000554997 MEIS3P2A8K0S8 358 aa11.08□□□□□ -0.64
SYNE2-215ENST00000554997 ZBBXA8MT70 800 aa11.08□□□□□ -0.64
SYNE2-215ENST00000554997 BECN2A8MW95 431 aa11.08□□□□□ -0.64
SYNE2-215ENST00000554997 LACTBL1A8MY62 500 aa11.08□□□□□ -0.64
SYNE2-215ENST00000554997 MEFVO15553 781 aaPredicted RBP11.08□□□□□ -0.64
SYNE2-215ENST00000554997 HOXA2O43364 376 aa11.08□□□□□ -0.64
SYNE2-215ENST00000554997 DGKIO75912 1065 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms