RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 CAP1Q01518 475 aa9.64□□□□□ -0.87
TDP1-210ENST00000554976 MAP2K1Q02750 393 aaPredicted RBP9.64□□□□□ -0.87
TDP1-210ENST00000554976 STRN3Q13033 797 aa9.64□□□□□ -0.87
TDP1-210ENST00000554976 PRPF4BQ13523 1007 aaKnown RBP9.64□□□□□ -0.87
TDP1-210ENST00000554976 TUBB2AQ13885 445 aa9.64□□□□□ -0.87
TDP1-210ENST00000554976 BMS1Q14692 1282 aaKnown RBP9.64□□□□□ -0.87
TDP1-210ENST00000554976 EFCAB12Q6NXP0 572 aa9.64□□□□□ -0.87
TDP1-210ENST00000554976 DPP9Q86TI2 863 aa9.64□□□□□ -0.87
TDP1-210ENST00000554976 RNF10Q8N5U6 811 aaKnown RBP9.64□□□□□ -0.87
TDP1-210ENST00000554976 DDX1Q92499 740 aaKnown RBP9.64□□□□□ -0.87
TDP1-210ENST00000554976 VTI1AQ96AJ9 217 aa9.64□□□□□ -0.87
TDP1-210ENST00000554976 TUBB2BQ9BVA1 445 aa9.64□□□□□ -0.87
TDP1-210ENST00000554976 CDC23Q9UJX2 597 aa9.64□□□□□ -0.87
TDP1-210ENST00000554976 INTUQ9ULD6 942 aa9.64□□□□□ -0.87
TDP1-210ENST00000554976 CTAGE9A4FU28 777 aa9.64□□□□□ -0.87
TDP1-210ENST00000554976 ZNF233A6NK53 670 aa9.64□□□□□ -0.87
TDP1-210ENST00000554976 LDHAP00338 332 aaKnown RBP9.64□□□□□ -0.87
TDP1-210ENST00000554976 F2P00734 622 aa9.64□□□□□ -0.87
TDP1-210ENST00000554976 KLRC1P26715 233 aa9.64□□□□□ -0.87
TDP1-210ENST00000554976 TNFSF9P41273 254 aa9.64□□□□□ -0.87
TDP1-210ENST00000554976 CLCN3P51790 818 aa9.64□□□□□ -0.87
TDP1-210ENST00000554976 CRHR2Q13324 411 aa9.64□□□□□ -0.87
TDP1-210ENST00000554976 SPA17Q15506 151 aa9.64□□□□□ -0.87
TDP1-210ENST00000554976 KIAA1328Q86T90 577 aa9.64□□□□□ -0.87
TDP1-210ENST00000554976 BRSK2Q8IWQ3 736 aa9.64□□□□□ -0.87
TDP1-210ENST00000554976 FAM84AQ96KN4 292 aa9.64□□□□□ -0.87
TDP1-210ENST00000554976 JPH2Q9BR39 696 aaPredicted RBP9.64□□□□□ -0.87
TDP1-210ENST00000554976 C2orf40Q9H1Z8 148 aa9.64□□□□□ -0.87
TDP1-210ENST00000554976 RNF216Q9NWF9 866 aaPredicted RBP9.64□□□□□ -0.87
TDP1-210ENST00000554976 RAB20Q9NX57 234 aa9.64□□□□□ -0.87
TDP1-210ENST00000554976 ADAMTS1Q9UHI8 967 aa9.64□□□□□ -0.87
TDP1-210ENST00000554976 CNTN6Q9UQ52 1028 aa9.64□□□□□ -0.87
TDP1-210ENST00000554976 TRIP12Q14669 1992 aaPredicted RBP9.63□□□□□ -0.87
TDP1-210ENST00000554976 ACKR2O00590 384 aa9.63□□□□□ -0.87
TDP1-210ENST00000554976 ASAP2O43150 1006 aa9.63□□□□□ -0.87
TDP1-210ENST00000554976 AKR1B10O60218 316 aa9.63□□□□□ -0.87
TDP1-210ENST00000554976 TOM1L1O75674 476 aa9.63□□□□□ -0.87
TDP1-210ENST00000554976 URI1O94763 535 aaPredicted RBP9.63□□□□□ -0.87
TDP1-210ENST00000554976 MOCS3O95396 460 aa9.63□□□□□ -0.87
TDP1-210ENST00000554976 MAGEA1P43355 309 aa9.63□□□□□ -0.87
TDP1-210ENST00000554976 TAF1CQ15572 869 aaPredicted RBP9.63□□□□□ -0.87
TDP1-210ENST00000554976 PALB2Q86YC2 1186 aa9.63□□□□□ -0.87
TDP1-210ENST00000554976 LRRC57Q8N9N7 239 aa9.63□□□□□ -0.87
TDP1-210ENST00000554976 FBXL13Q8NEE6 735 aa9.63□□□□□ -0.87
TDP1-210ENST00000554976 CXorf38Q8TB03 319 aa9.63□□□□□ -0.87
TDP1-210ENST00000554976 SPAG5Q96R06 1193 aa9.63□□□□□ -0.87
TDP1-210ENST00000554976 MRPL4Q9BYD3 311 aaKnown RBP9.63□□□□□ -0.87
TDP1-210ENST00000554976 Q9Y3F1 56 aa9.63□□□□□ -0.87
TDP1-210ENST00000554976 CITO14578 2027 aa9.63□□□□□ -0.87
TDP1-210ENST00000554976 KAT6AQ92794 2004 aa9.63□□□□□ -0.87
TDP1-210ENST00000554976 A0A0A6YYK5 440 aaPredicted RBP9.63□□□□□ -0.87
TDP1-210ENST00000554976 MBLAC1A4D2B0 266 aaPredicted RBP9.63□□□□□ -0.87
TDP1-210ENST00000554976 B4GALT5O43286 388 aa9.63□□□□□ -0.87
TDP1-210ENST00000554976 PRKCBP05771 671 aa9.63□□□□□ -0.87
TDP1-210ENST00000554976 PRLRP16471 622 aa9.63□□□□□ -0.87
TDP1-210ENST00000554976 ACO1P21399 889 aaKnown RBP9.63□□□□□ -0.87
TDP1-210ENST00000554976 ACOT2P49753 483 aa9.63□□□□□ -0.87
TDP1-210ENST00000554976 GCNT1Q02742 428 aa9.63□□□□□ -0.87
TDP1-210ENST00000554976 KIF5AQ12840 1032 aa9.63□□□□□ -0.87
TDP1-210ENST00000554976 TDRD12Q587J7 1177 aaKnown RBP9.63□□□□□ -0.87
TDP1-210ENST00000554976 RNF149Q8NC42 400 aa9.63□□□□□ -0.87
TDP1-210ENST00000554976 TRPV1Q8NER1 839 aa9.63□□□□□ -0.87
TDP1-210ENST00000554976 OR6J1Q8NGC5 347 aa9.63□□□□□ -0.87
TDP1-210ENST00000554976 UBE2TQ9NPD8 197 aaPredicted RBP9.63□□□□□ -0.87
TDP1-210ENST00000554976 HDAC6Q9UBN7 1215 aa9.63□□□□□ -0.87
TDP1-210ENST00000554976 TRPC6Q9Y210 931 aa9.63□□□□□ -0.87
TDP1-210ENST00000554976 TNFSF13BQ9Y275 285 aa9.63□□□□□ -0.87
TDP1-210ENST00000554976 EFCAB8A8MWE9 144 aa9.62□□□□□ -0.87
TDP1-210ENST00000554976 H3BRB1 525 aa9.62□□□□□ -0.87
TDP1-210ENST00000554976 PRAMEF19Q5SWL8 479 aa9.62□□□□□ -0.87
TDP1-210ENST00000554976 SMYD5Q6GMV2 418 aa9.62□□□□□ -0.87
TDP1-210ENST00000554976 SLFN11Q7Z7L1 901 aa9.62□□□□□ -0.87
TDP1-210ENST00000554976 RHPN2Q8IUC4 686 aa9.62□□□□□ -0.87
TDP1-210ENST00000554976 EPS8L1Q8TE68 723 aa9.62□□□□□ -0.87
TDP1-210ENST00000554976 SLC20A1Q8WUM9 679 aa9.62□□□□□ -0.87
TDP1-210ENST00000554976 BICD1Q96G01 975 aa9.62□□□□□ -0.87
TDP1-210ENST00000554976 APBA2Q99767 749 aa9.62□□□□□ -0.87
TDP1-210ENST00000554976 CARD6Q9BX69 1037 aa9.62□□□□□ -0.87
TDP1-210ENST00000554976 ADAMTS10Q9H324 1103 aa9.62□□□□□ -0.87
TDP1-210ENST00000554976 DEF6Q9H4E7 631 aa9.62□□□□□ -0.87
TDP1-210ENST00000554976 TUT1Q9H6E5 874 aaKnown RBP9.62□□□□□ -0.87
TDP1-210ENST00000554976 APOBEC3GQ9HC16 384 aaKnown RBP9.62□□□□□ -0.87
TDP1-210ENST00000554976 STXBP5LQ9Y2K9 1186 aa9.62□□□□□ -0.87
TDP1-210ENST00000554976 TRIP11Q15643 1979 aa9.62□□□□□ -0.87
TDP1-210ENST00000554976 MAGEB2O15479 319 aa9.62□□□□□ -0.87
TDP1-210ENST00000554976 TNFAIP2Q03169 654 aa9.62□□□□□ -0.87
TDP1-210ENST00000554976 ARID5AQ03989 594 aa9.62□□□□□ -0.87
TDP1-210ENST00000554976 MPZL3Q6UWV2 235 aa9.62□□□□□ -0.87
TDP1-210ENST00000554976 NOP9Q86U38 636 aaKnown RBP9.62□□□□□ -0.87
TDP1-210ENST00000554976 DNAAF5Q86Y56 855 aa9.62□□□□□ -0.87
TDP1-210ENST00000554976 FMNL3Q8IVF7 1028 aa9.62□□□□□ -0.87
TDP1-210ENST00000554976 TRIM58Q8NG06 486 aa9.62□□□□□ -0.87
TDP1-210ENST00000554976 TATDN2Q93075 761 aa9.62□□□□□ -0.87
TDP1-210ENST00000554976 CCDC127Q96BQ5 260 aa9.62□□□□□ -0.87
TDP1-210ENST00000554976 PCDHB18PQ96TA0 734 aa9.62□□□□□ -0.87
TDP1-210ENST00000554976 MSTO1Q9BUK6 570 aa9.62□□□□□ -0.87
TDP1-210ENST00000554976 PDE11AQ9HCR9 933 aa9.62□□□□□ -0.87
TDP1-210ENST00000554976 RBAKQ9NYW8 714 aaPredicted RBP9.62□□□□□ -0.87
TDP1-210ENST00000554976 BCCIPQ9P287 314 aaKnown RBP eCLIP9.62□□□□□ -0.87
TDP1-210ENST00000554976 MACROD2A1Z1Q3 448 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms