RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 TEX19Q8NA77 164 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 CNOT7Q9UIV1 285 aaKnown RBP3.5□□□□□ -1.85
SYNE2-212ENST00000554584 CLIC4Q9Y696 253 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 SCN3AQ9NY46 2000 aa3.5□□□□□ -1.85
SYNE2-212ENST00000554584 ECE2O60344 883 aa3.49□□□□□ -1.85
SYNE2-212ENST00000554584 IFT88Q13099 833 aa3.49□□□□□ -1.85
SYNE2-212ENST00000554584 SWSAP1Q6NVH7 229 aa3.49□□□□□ -1.85
SYNE2-212ENST00000554584 SPATS2Q86XZ4 545 aaKnown RBP3.49□□□□□ -1.85
SYNE2-212ENST00000554584 DOK4Q8TEW6 326 aa3.49□□□□□ -1.85
SYNE2-212ENST00000554584 UCMAQ8WVF2 138 aa3.49□□□□□ -1.85
SYNE2-212ENST00000554584 SERPINB4P48594 390 aa3.49□□□□□ -1.85
SYNE2-212ENST00000554584 KLC1Q07866 573 aa3.49□□□□□ -1.85
SYNE2-212ENST00000554584 CUL1Q13616 776 aa3.49□□□□□ -1.85
SYNE2-212ENST00000554584 CYP27C1Q4G0S4 372 aa3.49□□□□□ -1.85
SYNE2-212ENST00000554584 GMCL1Q96IK5 515 aa3.49□□□□□ -1.85
SYNE2-212ENST00000554584 CEP170P1Q96L14 293 aa3.49□□□□□ -1.85
SYNE2-212ENST00000554584 SPASTQ9UBP0 616 aa3.49□□□□□ -1.85
SYNE2-212ENST00000554584 SYCE1LA8MT33 242 aa3.49□□□□□ -1.85
SYNE2-212ENST00000554584 KBTBD13C9JR72 458 aa3.49□□□□□ -1.85
SYNE2-212ENST00000554584 WDR47O94967 919 aa3.49□□□□□ -1.85
SYNE2-212ENST00000554584 PRAMEP78395 509 aa3.49□□□□□ -1.85
SYNE2-212ENST00000554584 ARID5BQ14865 1188 aa3.49□□□□□ -1.85
SYNE2-212ENST00000554584 NAPGQ99747 312 aaPredicted RBP3.49□□□□□ -1.85
SYNE2-212ENST00000554584 UNC45AQ9H3U1 944 aa3.49□□□□□ -1.85
SYNE2-212ENST00000554584 USE1Q9NZ43 259 aa3.49□□□□□ -1.85
SYNE2-212ENST00000554584 SMARCAL1Q9NZC9 954 aa3.49□□□□□ -1.85
SYNE2-212ENST00000554584 A8MUA0 341 aa3.49□□□□□ -1.85
SYNE2-212ENST00000554584 UMPSP11172 480 aa3.49□□□□□ -1.85
SYNE2-212ENST00000554584 CYTH1Q15438 398 aa3.49□□□□□ -1.85
SYNE2-212ENST00000554584 TAOK1Q7L7X3 1001 aa3.49□□□□□ -1.85
SYNE2-212ENST00000554584 RHPN2Q8IUC4 686 aa3.49□□□□□ -1.85
SYNE2-212ENST00000554584 OXER1Q8TDS5 423 aa3.49□□□□□ -1.85
SYNE2-212ENST00000554584 ING5Q8WYH8 240 aa3.49□□□□□ -1.85
SYNE2-212ENST00000554584 PHF21AQ96BD5 680 aa3.49□□□□□ -1.85
SYNE2-212ENST00000554584 DCUN1D1Q96GG9 259 aa3.49□□□□□ -1.85
SYNE2-212ENST00000554584 PI4K2AQ9BTU6 479 aa3.49□□□□□ -1.85
SYNE2-212ENST00000554584 RNF14Q9UBS8 474 aa3.49□□□□□ -1.85
SYNE2-212ENST00000554584 SERPINB13Q9UIV8 391 aa3.49□□□□□ -1.85
SYNE2-212ENST00000554584 POMCP01189 267 aa3.49□□□□□ -1.85
SYNE2-212ENST00000554584 KRT7P08729 469 aa3.49□□□□□ -1.85
SYNE2-212ENST00000554584 PHBP35232 272 aa3.49□□□□□ -1.85
SYNE2-212ENST00000554584 RAP1GAPP47736 663 aa3.49□□□□□ -1.85
SYNE2-212ENST00000554584 POU5F1Q01860 360 aaKnown RBP3.49□□□□□ -1.85
SYNE2-212ENST00000554584 ZSCAN26Q16670 478 aa3.49□□□□□ -1.85
SYNE2-212ENST00000554584 ZRANB3Q5FWF4 1079 aa3.49□□□□□ -1.85
SYNE2-212ENST00000554584 KRT78Q8N1N4 520 aa3.49□□□□□ -1.85
SYNE2-212ENST00000554584 CARNMT1Q8N4J0 409 aa3.49□□□□□ -1.85
SYNE2-212ENST00000554584 STAG1Q8WVM7 1258 aa3.49□□□□□ -1.85
SYNE2-212ENST00000554584 ZKSCAN4Q969J2 545 aaPredicted RBP3.49□□□□□ -1.85
SYNE2-212ENST00000554584 EPN3Q9H201 632 aa3.49□□□□□ -1.85
SYNE2-212ENST00000554584 ADNPQ9H2P0 1102 aa3.49□□□□□ -1.85
SYNE2-212ENST00000554584 MARCH7Q9H992 704 aa3.49□□□□□ -1.85
SYNE2-212ENST00000554584 SEMA3GQ9NS98 782 aa3.49□□□□□ -1.85
SYNE2-212ENST00000554584 FAM135AQ9P2D6 1515 aa3.49□□□□□ -1.85
SYNE2-212ENST00000554584 A0A0D9SFI3 127 aa3.49□□□□□ -1.85
SYNE2-212ENST00000554584 XPO1O14980 1071 aaKnown RBP3.49□□□□□ -1.85
SYNE2-212ENST00000554584 MAFKO60675 156 aa3.49□□□□□ -1.85
SYNE2-212ENST00000554584 GNPTABQ3T906 1256 aa3.49□□□□□ -1.85
SYNE2-212ENST00000554584 SAPCD2Q86UD0 394 aa3.49□□□□□ -1.85
SYNE2-212ENST00000554584 ANKRD44Q8N8A2 993 aa3.49□□□□□ -1.85
SYNE2-212ENST00000554584 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.49□□□□□ -1.853e-8■■■■■ 70.6
SYNE2-212ENST00000554584 ANKRD2Q9GZV1 360 aa3.49□□□□□ -1.85
SYNE2-212ENST00000554584 SH2D4AQ9H788 454 aa3.49□□□□□ -1.85
SYNE2-212ENST00000554584 RIC8AQ9NPQ8 531 aa3.49□□□□□ -1.85
SYNE2-212ENST00000554584 PPP1R9AQ9ULJ8 1098 aa3.49□□□□□ -1.85
SYNE2-212ENST00000554584 TFR2Q9UP52 801 aa3.49□□□□□ -1.85
SYNE2-212ENST00000554584 ABCC1P33527 1531 aa3.49□□□□□ -1.85
SYNE2-212ENST00000554584 A0A075B6Q4 140 aa3.49□□□□□ -1.85
SYNE2-212ENST00000554584 A0A1W2PQ67 120 aa3.49□□□□□ -1.85
SYNE2-212ENST00000554584 TBKBP1A7MCY6 615 aa3.49□□□□□ -1.85
SYNE2-212ENST00000554584 YWHAQP27348 245 aa3.49□□□□□ -1.85
SYNE2-212ENST00000554584 KDSRQ06136 332 aa3.49□□□□□ -1.85
SYNE2-212ENST00000554584 GRAMD1BQ3KR37 738 aa3.49□□□□□ -1.85
SYNE2-212ENST00000554584 MGAT5BQ3V5L5 792 aa3.49□□□□□ -1.85
SYNE2-212ENST00000554584 SETD6Q8TBK2 473 aa3.49□□□□□ -1.85
SYNE2-212ENST00000554584 PPP1R13BQ96KQ4 1090 aa3.49□□□□□ -1.85
SYNE2-212ENST00000554584 C11orf70Q9BRQ4 267 aa3.49□□□□□ -1.85
SYNE2-212ENST00000554584 USP44Q9H0E7 712 aa3.49□□□□□ -1.85
SYNE2-212ENST00000554584 SYNPO2Q9UMS6 1093 aa3.49□□□□□ -1.85
SYNE2-212ENST00000554584 TRPM2O94759 1503 aa3.49□□□□□ -1.85
SYNE2-212ENST00000554584 ZDBF2Q9HCK1 2354 aa3.49□□□□□ -1.85
SYNE2-212ENST00000554584 HNRNPDLO14979 420 aaKnown RBP3.49□□□□□ -1.85
SYNE2-212ENST00000554584 TMEM11P17152 192 aa3.49□□□□□ -1.85
SYNE2-212ENST00000554584 CCINQ13939 588 aa3.49□□□□□ -1.85
SYNE2-212ENST00000554584 RASGRF1Q13972 1273 aa3.49□□□□□ -1.85
SYNE2-212ENST00000554584 SNCBQ16143 134 aa3.49□□□□□ -1.85
SYNE2-212ENST00000554584 CADPS2Q86UW7 1296 aa3.49□□□□□ -1.85
SYNE2-212ENST00000554584 CENPKQ9BS16 269 aa3.49□□□□□ -1.85
SYNE2-212ENST00000554584 TELO2Q9Y4R8 837 aa3.49□□□□□ -1.85
SYNE2-212ENST00000554584 RGL2O15211 777 aa3.49□□□□□ -1.85
SYNE2-212ENST00000554584 MYBL1P10243 752 aa3.49□□□□□ -1.85
SYNE2-212ENST00000554584 NTSP30990 170 aa3.49□□□□□ -1.85
SYNE2-212ENST00000554584 YWHABP31946 246 aaKnown RBP3.49□□□□□ -1.85
SYNE2-212ENST00000554584 PRKCQQ04759 706 aa3.49□□□□□ -1.85
SYNE2-212ENST00000554584 MRPL28Q13084 256 aaKnown RBP3.49□□□□□ -1.85
SYNE2-212ENST00000554584 NONOQ15233 471 aaKnown RBP eCLIP3.49□□□□□ -1.85
SYNE2-212ENST00000554584 EXOC3L4Q17RC7 722 aa3.49□□□□□ -1.85
SYNE2-212ENST00000554584 CYP26C1Q6V0L0 522 aa3.49□□□□□ -1.85
SYNE2-212ENST00000554584 PHACTR4Q8IZ21 702 aa3.49□□□□□ -1.85
SYNE2-212ENST00000554584 CABS1Q96KC9 395 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms