RNA–Protein interactions for RNA: ENST00000554453.5

ABCD4-221, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 5

Gene ABCD4, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-221ENST00000554453 FNIP2Q9P278 1114 aa12.26□□□□□ -0.45
ABCD4-221ENST00000554453 ADAM28Q9UKQ2 775 aa12.26□□□□□ -0.45
ABCD4-221ENST00000554453 USP20Q9Y2K6 914 aa12.26□□□□□ -0.45
ABCD4-221ENST00000554453 PTPRZ1P23471 2315 aaPredicted RBP12.26□□□□□ -0.45
ABCD4-221ENST00000554453 C2CD4DB7Z1M9 353 aa12.25□□□□□ -0.45
ABCD4-221ENST00000554453 F8W810 466 aa12.25□□□□□ -0.45
ABCD4-221ENST00000554453 C2CD2LO14523 706 aa12.25□□□□□ -0.45
ABCD4-221ENST00000554453 TADA2AO75478 443 aa12.25□□□□□ -0.45
ABCD4-221ENST00000554453 PAPLNO95428 1278 aa12.25□□□□□ -0.45
ABCD4-221ENST00000554453 PTPN21Q16825 1174 aa12.25□□□□□ -0.45
ABCD4-221ENST00000554453 HYIQ5T013 277 aa12.25□□□□□ -0.45
ABCD4-221ENST00000554453 ARL6IP4Q66PJ3 421 aaKnown RBP12.25□□□□□ -0.45
ABCD4-221ENST00000554453 LILRA6Q6PI73 481 aa12.25□□□□□ -0.45
ABCD4-221ENST00000554453 TMC5Q6UXY8 1006 aa12.25□□□□□ -0.45
ABCD4-221ENST00000554453 CYP26C1Q6V0L0 522 aa12.25□□□□□ -0.45
ABCD4-221ENST00000554453 C15orf39Q6ZRI6 1047 aa12.25□□□□□ -0.45
ABCD4-221ENST00000554453 CMASQ8NFW8 434 aaPredicted RBP12.25□□□□□ -0.45
ABCD4-221ENST00000554453 RHOBTB2Q9BYZ6 727 aa12.25□□□□□ -0.45
ABCD4-221ENST00000554453 SFXN1Q9H9B4 322 aa12.25□□□□□ -0.45
ABCD4-221ENST00000554453 C17orf75Q9HAS0 396 aa12.25□□□□□ -0.45
ABCD4-221ENST00000554453 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.25□□□□□ -0.45
ABCD4-221ENST00000554453 DPP7Q9UHL4 492 aa12.25□□□□□ -0.45
ABCD4-221ENST00000554453 KCNG1Q9UIX4 513 aa12.25□□□□□ -0.45
ABCD4-221ENST00000554453 TNFSF13BQ9Y275 285 aa12.25□□□□□ -0.45
ABCD4-221ENST00000554453 RBM19Q9Y4C8 960 aaKnown RBP12.25□□□□□ -0.45
ABCD4-221ENST00000554453 PP2D1A8MPX8 630 aa12.24□□□□□ -0.45
ABCD4-221ENST00000554453 H3BQV1 296 aa12.24□□□□□ -0.45
ABCD4-221ENST00000554453 PTGESO14684 152 aa12.24□□□□□ -0.45
ABCD4-221ENST00000554453 TRIOO75962 3097 aa12.24□□□□□ -0.45
ABCD4-221ENST00000554453 RECQL4O94761 1208 aa12.24□□□□□ -0.45
ABCD4-221ENST00000554453 EDN1P05305 212 aa12.24□□□□□ -0.45
ABCD4-221ENST00000554453 LIG1P18858 919 aa12.24□□□□□ -0.45
ABCD4-221ENST00000554453 MYH11P35749 1972 aa12.24□□□□□ -0.45
ABCD4-221ENST00000554453 NPTX2P47972 431 aa12.24□□□□□ -0.45
ABCD4-221ENST00000554453 PEX3P56589 373 aa12.24□□□□□ -0.45
ABCD4-221ENST00000554453 HSP90AA2PQ14568 343 aaPredicted RBP12.24□□□□□ -0.45
ABCD4-221ENST00000554453 NAB2Q15742 525 aa12.24□□□□□ -0.45
ABCD4-221ENST00000554453 TMEM132AQ24JP5 1023 aa12.24□□□□□ -0.45
ABCD4-221ENST00000554453 DCAF4L1Q3SXM0 396 aa12.24□□□□□ -0.45
ABCD4-221ENST00000554453 ATF7IP2Q5U623 682 aa12.24□□□□□ -0.45
ABCD4-221ENST00000554453 LARP1BQ659C4 914 aaKnown RBP12.24□□□□□ -0.45
ABCD4-221ENST00000554453 KCNK18Q7Z418 384 aa12.24□□□□□ -0.45
ABCD4-221ENST00000554453 APBB1IPQ7Z5R6 666 aaPredicted RBP12.24□□□□□ -0.45
ABCD4-221ENST00000554453 DAW1Q8N136 415 aa12.24□□□□□ -0.45
ABCD4-221ENST00000554453 DOCK8Q8NF50 2099 aa12.24□□□□□ -0.45
ABCD4-221ENST00000554453 FEZF2Q8TBJ5 459 aa12.24□□□□□ -0.45
ABCD4-221ENST00000554453 ASIC4Q96FT7 647 aa12.24□□□□□ -0.45
ABCD4-221ENST00000554453 TBC1D32Q96NH3 1257 aa12.24□□□□□ -0.45
ABCD4-221ENST00000554453 ACO2Q99798 780 aaKnown RBP12.24□□□□□ -0.45
ABCD4-221ENST00000554453 KIFC3Q9BVG8 833 aa12.24□□□□□ -0.45
ABCD4-221ENST00000554453 TIPINQ9BVW5 301 aa12.24□□□□□ -0.45
ABCD4-221ENST00000554453 CXCL16Q9H2A7 254 aa12.24□□□□□ -0.45
ABCD4-221ENST00000554453 PLEKHA4Q9H4M7 779 aa12.24□□□□□ -0.45
ABCD4-221ENST00000554453 PTPRHQ9HD43 1115 aa12.24□□□□□ -0.45
ABCD4-221ENST00000554453 LIMD1Q9UGP4 676 aa12.24□□□□□ -0.45
ABCD4-221ENST00000554453 SMC3Q9UQE7 1217 aa12.24□□□□□ -0.45
ABCD4-221ENST00000554453 CCDC195A0A1B0GUA6 201 aa12.23□□□□□ -0.45
ABCD4-221ENST00000554453 CCDC169A6NNP5 214 aa12.23□□□□□ -0.45
ABCD4-221ENST00000554453 HIP1RO75146 1068 aa12.23□□□□□ -0.45
ABCD4-221ENST00000554453 GLUD1P00367 558 aa12.23□□□□□ -0.45
ABCD4-221ENST00000554453 SP100P23497 879 aaPredicted RBP12.23□□□□□ -0.45
ABCD4-221ENST00000554453 GUCY2CP25092 1073 aa12.23□□□□□ -0.45
ABCD4-221ENST00000554453 MAPK7Q13164 816 aa12.23□□□□□ -0.45
ABCD4-221ENST00000554453 XKR4Q5GH76 650 aa12.23□□□□□ -0.45
ABCD4-221ENST00000554453 ELMSAN1Q6PJG2 1045 aa12.23□□□□□ -0.45
ABCD4-221ENST00000554453 ALKAL1Q6UXT8 129 aa12.23□□□□□ -0.45
ABCD4-221ENST00000554453 OTOP3Q7RTS5 596 aa12.23□□□□□ -0.45
ABCD4-221ENST00000554453 ZBTB33Q86T24 672 aa12.23□□□□□ -0.45
ABCD4-221ENST00000554453 UBALD2Q8IYN6 164 aa12.23□□□□□ -0.45
ABCD4-221ENST00000554453 FBXL6Q8N531 539 aa12.23□□□□□ -0.45
ABCD4-221ENST00000554453 SYT2Q8N9I0 419 aaPredicted RBP12.23□□□□□ -0.45
ABCD4-221ENST00000554453 KREMEN2Q8NCW0 462 aa12.23□□□□□ -0.45
ABCD4-221ENST00000554453 RIN2Q8WYP3 895 aaPredicted RBP12.23□□□□□ -0.45
ABCD4-221ENST00000554453 RABGGTAQ92696 567 aa12.23□□□□□ -0.45
ABCD4-221ENST00000554453 PNMA5Q96PV4 448 aa12.23□□□□□ -0.45
ABCD4-221ENST00000554453 PAAF1Q9BRP4 392 aa12.23□□□□□ -0.45
ABCD4-221ENST00000554453 RUSC1Q9BVN2 902 aa12.23□□□□□ -0.45
ABCD4-221ENST00000554453 NT5C3AQ9H0P0 336 aa12.23□□□□□ -0.45
ABCD4-221ENST00000554453 TSHZ2Q9NRE2 1034 aa12.23□□□□□ -0.45
ABCD4-221ENST00000554453 ARHGAP28Q9P2N2 729 aa12.23□□□□□ -0.45
ABCD4-221ENST00000554453 SORCS3Q9UPU3 1222 aa12.23□□□□□ -0.45
ABCD4-221ENST00000554453 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.23□□□□□ -0.45
ABCD4-221ENST00000554453 PHLPP2Q6ZVD8 1323 aa12.22□□□□□ -0.45
ABCD4-221ENST00000554453 SPDYE4A6NLX3 237 aa12.22□□□□□ -0.45
ABCD4-221ENST00000554453 SFI1A8K8P3 1242 aa12.22□□□□□ -0.45
ABCD4-221ENST00000554453 SLC26A4O43511 780 aa12.22□□□□□ -0.45
ABCD4-221ENST00000554453 HOXD11P31277 338 aaPredicted RBP12.22□□□□□ -0.45
ABCD4-221ENST00000554453 ELAVL2Q12926 359 aaKnown RBP12.22□□□□□ -0.45
ABCD4-221ENST00000554453 DMP1Q13316 513 aaPredicted RBP12.22□□□□□ -0.45
ABCD4-221ENST00000554453 DCLRE1AQ6PJP8 1040 aa12.22□□□□□ -0.45
ABCD4-221ENST00000554453 TAS1R3Q7RTX0 852 aa12.22□□□□□ -0.45
ABCD4-221ENST00000554453 PALB2Q86YC2 1186 aa12.22□□□□□ -0.45
ABCD4-221ENST00000554453 TDRD5Q8NAT2 981 aaKnown RBP12.22□□□□□ -0.45
ABCD4-221ENST00000554453 LNX1Q8TBB1 728 aaPredicted RBP12.22□□□□□ -0.45
ABCD4-221ENST00000554453 SPIRE2Q8WWL2 714 aa12.22□□□□□ -0.45
ABCD4-221ENST00000554453 PIK3R5Q8WYR1 880 aa12.22□□□□□ -0.45
ABCD4-221ENST00000554453 ACSF2Q96CM8 615 aaPredicted RBP12.22□□□□□ -0.45
ABCD4-221ENST00000554453 B3GALT6Q96L58 329 aa12.22□□□□□ -0.45
ABCD4-221ENST00000554453 DRC1Q96MC2 740 aa12.22□□□□□ -0.45
ABCD4-221ENST00000554453 PPP1R10Q96QC0 940 aaKnown RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms