RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 RAB34Q9BZG1 259 aa20.71■□□□□ 0.91
CPSF2-203ENST00000554290 SF3B1O75533 1304 aaKnown RBP eCLIP20.71■□□□□ 0.91
CPSF2-203ENST00000554290 THP07101 528 aa20.7■□□□□ 0.9
CPSF2-203ENST00000554290 LIG1P18858 919 aa20.7■□□□□ 0.9
CPSF2-203ENST00000554290 TCF15Q12870 199 aa20.7■□□□□ 0.9
CPSF2-203ENST00000554290 PALB2Q86YC2 1186 aa20.7■□□□□ 0.9
CPSF2-203ENST00000554290 C4orf32Q8N8J7 132 aa20.7■□□□□ 0.9
CPSF2-203ENST00000554290 RABGGTAQ92696 567 aa20.7■□□□□ 0.9
CPSF2-203ENST00000554290 KIFAP3Q92845 792 aa20.7■□□□□ 0.9
CPSF2-203ENST00000554290 B3GALT6Q96L58 329 aa20.7■□□□□ 0.9
CPSF2-203ENST00000554290 CCDC113Q9H0I3 377 aa20.7■□□□□ 0.9
CPSF2-203ENST00000554290 BHMT2Q9H2M3 363 aa20.7■□□□□ 0.9
CPSF2-203ENST00000554290 MFSD1Q9H3U5 465 aa20.7■□□□□ 0.9
CPSF2-203ENST00000554290 SNTG2Q9NY99 539 aa20.7■□□□□ 0.9
CPSF2-203ENST00000554290 TTLL13PA6NNM8 815 aa20.69■□□□□ 0.9
CPSF2-203ENST00000554290 SPATA31D3P0C874 917 aa20.69■□□□□ 0.9
CPSF2-203ENST00000554290 U2AF2P26368 475 aaKnown RBP eCLIP20.69■□□□□ 0.9
CPSF2-203ENST00000554290 TDGQ13569 410 aa20.69■□□□□ 0.9
CPSF2-203ENST00000554290 SPATA31D4Q6ZUB0 917 aa20.69■□□□□ 0.9
CPSF2-203ENST00000554290 APBB1IPQ7Z5R6 666 aaPredicted RBP20.69■□□□□ 0.9
CPSF2-203ENST00000554290 SMG7Q92540 1137 aaKnown RBP20.69■□□□□ 0.9
CPSF2-203ENST00000554290 SMOC2Q9H3U7 446 aa20.69■□□□□ 0.9
CPSF2-203ENST00000554290 WDR6Q9NNW5 1121 aaKnown RBP20.69■□□□□ 0.9
CPSF2-203ENST00000554290 IGSF9Q9P2J2 1179 aa20.69■□□□□ 0.9
CPSF2-203ENST00000554290 KIAA1024Q9UPX6 916 aa20.69■□□□□ 0.9
CPSF2-203ENST00000554290 RECQL4O94761 1208 aa20.68■□□□□ 0.9
CPSF2-203ENST00000554290 MYBP10242 640 aa20.68■□□□□ 0.9
CPSF2-203ENST00000554290 PTGDRQ13258 359 aa20.68■□□□□ 0.9
CPSF2-203ENST00000554290 DCAF4L1Q3SXM0 396 aa20.68■□□□□ 0.9
CPSF2-203ENST00000554290 SNX29Q8TEQ0 813 aa20.68■□□□□ 0.9
CPSF2-203ENST00000554290 KIF2CQ99661 725 aa20.68■□□□□ 0.9
CPSF2-203ENST00000554290 PIDD1Q9HB75 910 aa20.68■□□□□ 0.9
CPSF2-203ENST00000554290 DDX19AQ9NUU7 478 aaKnown RBP20.68■□□□□ 0.9
CPSF2-203ENST00000554290 ZDHHC7Q9NXF8 308 aa20.68■□□□□ 0.9
CPSF2-203ENST00000554290 KIF3AQ9Y496 699 aa20.68■□□□□ 0.9
CPSF2-203ENST00000554290 TDRD15B5MCY1 1934 aaKnown RBP20.68■□□□□ 0.9
CPSF2-203ENST00000554290 CASTOR2A6NHX0 329 aa20.67■□□□□ 0.9
CPSF2-203ENST00000554290 K7ERI5 159 aa20.67■□□□□ 0.9
CPSF2-203ENST00000554290 LAD1O00515 517 aa20.67■□□□□ 0.9
CPSF2-203ENST00000554290 PTGESO14684 152 aa20.67■□□□□ 0.9
CPSF2-203ENST00000554290 TGM5O43548 720 aa20.67■□□□□ 0.9
CPSF2-203ENST00000554290 RFPL2O75678 378 aa20.67■□□□□ 0.9
CPSF2-203ENST00000554290 GBP2P32456 591 aaPredicted RBP20.67■□□□□ 0.9
CPSF2-203ENST00000554290 ELAVL2Q12926 359 aaKnown RBP20.67■□□□□ 0.9
CPSF2-203ENST00000554290 NBR1Q14596 966 aa20.67■□□□□ 0.9
CPSF2-203ENST00000554290 ECM1Q16610 540 aa20.67■□□□□ 0.9
CPSF2-203ENST00000554290 LILRA6Q6PI73 481 aa20.67■□□□□ 0.9
CPSF2-203ENST00000554290 GLYCTKQ8IVS8 523 aa20.67■□□□□ 0.9
CPSF2-203ENST00000554290 IGSF22Q8N9C0 903 aa20.67■□□□□ 0.9
CPSF2-203ENST00000554290 PAAF1Q9BRP4 392 aa20.67■□□□□ 0.9
CPSF2-203ENST00000554290 TTPALQ9BTX7 342 aa20.67■□□□□ 0.9
CPSF2-203ENST00000554290 NT5C3AQ9H0P0 336 aa20.67■□□□□ 0.9
CPSF2-203ENST00000554290 KCNK12Q9HB15 430 aa20.67■□□□□ 0.9
CPSF2-203ENST00000554290 CACNG4Q9UBN1 327 aa20.67■□□□□ 0.9
CPSF2-203ENST00000554290 DNM3Q9UQ16 869 aa20.67■□□□□ 0.9
CPSF2-203ENST00000554290 CLUHO75153 1309 aa20.67■□□□□ 0.9
CPSF2-203ENST00000554290 RPL17P18621 184 aaKnown RBP20.66■□□□□ 0.9
CPSF2-203ENST00000554290 ATF7IP2Q5U623 682 aa20.66■□□□□ 0.9
CPSF2-203ENST00000554290 FAM171A1Q5VUB5 890 aa20.66■□□□□ 0.9
CPSF2-203ENST00000554290 KRT79Q5XKE5 535 aa20.66■□□□□ 0.9
CPSF2-203ENST00000554290 ASTLQ6HA08 431 aaPredicted RBP20.66■□□□□ 0.9
CPSF2-203ENST00000554290 PDXDC1Q6P996 788 aa20.66■□□□□ 0.9
CPSF2-203ENST00000554290 PHOX2BQ99453 314 aa20.66■□□□□ 0.9
CPSF2-203ENST00000554290 PRKD2Q9BZL6 878 aa20.66■□□□□ 0.9
CPSF2-203ENST00000554290 POLD4Q9HCU8 107 aa20.66■□□□□ 0.9
CPSF2-203ENST00000554290 USP20Q9Y2K6 914 aa20.66■□□□□ 0.9
CPSF2-203ENST00000554290 GDAQ9Y2T3 454 aa20.66■□□□□ 0.9
CPSF2-203ENST00000554290 PCDHB6Q9Y5E3 794 aa20.66■□□□□ 0.9
CPSF2-203ENST00000554290 ZDBF2Q9HCK1 2354 aa20.66■□□□□ 0.9
CPSF2-203ENST00000554290 WDFY4Q6ZS81 3184 aa20.66■□□□□ 0.9
CPSF2-203ENST00000554290 DENND4AQ7Z401 1863 aa20.65■□□□□ 0.9
CPSF2-203ENST00000554290 KMT2EQ8IZD2 1858 aa20.65■□□□□ 0.9
CPSF2-203ENST00000554290 GALR2O43603 387 aaPredicted RBP20.65■□□□□ 0.9
CPSF2-203ENST00000554290 KIF4AO95239 1232 aa20.65■□□□□ 0.9
CPSF2-203ENST00000554290 PAPLNO95428 1278 aa20.65■□□□□ 0.9
CPSF2-203ENST00000554290 TOB1P50616 345 aaPredicted RBP20.65■□□□□ 0.9
CPSF2-203ENST00000554290 CLCN5P51795 746 aa20.65■□□□□ 0.9
CPSF2-203ENST00000554290 RTP2Q5QGT7 225 aa20.65■□□□□ 0.9
CPSF2-203ENST00000554290 EEF1DP3Q658K8 133 aa20.65■□□□□ 0.9
CPSF2-203ENST00000554290 PRSS55Q6UWB4 352 aaPredicted RBP20.65■□□□□ 0.9
CPSF2-203ENST00000554290 CEP57Q86XR8 500 aa20.65■□□□□ 0.9
CPSF2-203ENST00000554290 HASPINQ8TF76 798 aa20.65■□□□□ 0.9
CPSF2-203ENST00000554290 PIK3R5Q8WYR1 880 aa20.65■□□□□ 0.9
CPSF2-203ENST00000554290 ATOH1Q92858 354 aaPredicted RBP20.65■□□□□ 0.9
CPSF2-203ENST00000554290 ZNF707Q96C28 371 aaPredicted RBP20.65■□□□□ 0.9
CPSF2-203ENST00000554290 KIFC3Q9BVG8 833 aa20.65■□□□□ 0.9
CPSF2-203ENST00000554290 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.65■□□□□ 0.9
CPSF2-203ENST00000554290 DUSP12Q9UNI6 340 aa20.65■□□□□ 0.9
CPSF2-203ENST00000554290 MYO10Q9HD67 2058 aa20.65■□□□□ 0.9
CPSF2-203ENST00000554290 CCDC169A6NNP5 214 aa20.64■□□□□ 0.89
CPSF2-203ENST00000554290 N4BP1O75113 896 aaKnown RBP20.64■□□□□ 0.89
CPSF2-203ENST00000554290 ZMYND10O75800 440 aa20.64■□□□□ 0.89
CPSF2-203ENST00000554290 EDN1P05305 212 aa20.64■□□□□ 0.89
CPSF2-203ENST00000554290 PRPHP41219 470 aa20.64■□□□□ 0.89
CPSF2-203ENST00000554290 PSMD5Q16401 504 aa20.64■□□□□ 0.89
CPSF2-203ENST00000554290 NT5DC1Q5TFE4 455 aa20.64■□□□□ 0.89
CPSF2-203ENST00000554290 DTHD1Q6ZMT9 781 aa20.64■□□□□ 0.89
CPSF2-203ENST00000554290 TMEM105Q8N8V8 129 aa20.64■□□□□ 0.89
CPSF2-203ENST00000554290 NXPE3Q969Y0 559 aa20.64■□□□□ 0.89
CPSF2-203ENST00000554290 EPS15L1Q9UBC2 864 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms