RNA–Protein interactions for RNA: ENST00000554116.5

TUBB3-204, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 542 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-204ENST00000554116 FNIP2Q9P278 1114 aa12.86□□□□□ -0.35
TUBB3-204ENST00000554116 GIT1Q9Y2X7 761 aa12.86□□□□□ -0.35
TUBB3-204ENST00000554116 SPDYE4A6NLX3 237 aa12.85□□□□□ -0.35
TUBB3-204ENST00000554116 TBX3O15119 743 aa12.85□□□□□ -0.35
TUBB3-204ENST00000554116 ADAM12O43184 909 aa12.85□□□□□ -0.35
TUBB3-204ENST00000554116 SP9P0CG40 484 aa12.85□□□□□ -0.35
TUBB3-204ENST00000554116 RFX1P22670 979 aa12.85□□□□□ -0.35
TUBB3-204ENST00000554116 AXLP30530 894 aa12.85□□□□□ -0.35
TUBB3-204ENST00000554116 NEK4P51957 841 aa12.85□□□□□ -0.35
TUBB3-204ENST00000554116 NOTUMQ6P988 496 aa12.85□□□□□ -0.35
TUBB3-204ENST00000554116 PRSS55Q6UWB4 352 aaPredicted RBP12.85□□□□□ -0.35
TUBB3-204ENST00000554116 TCP11Q8WWU5 503 aa12.85□□□□□ -0.35
TUBB3-204ENST00000554116 NXPE3Q969Y0 559 aa12.85□□□□□ -0.35
TUBB3-204ENST00000554116 MTRQ99707 1265 aa12.85□□□□□ -0.35
TUBB3-204ENST00000554116 HINFPQ9BQA5 517 aa12.85□□□□□ -0.35
TUBB3-204ENST00000554116 CLSTN3Q9BQT9 956 aa12.85□□□□□ -0.35
TUBB3-204ENST00000554116 APOL6Q9BWW8 343 aa12.85□□□□□ -0.35
TUBB3-204ENST00000554116 ZSWIM4Q9H7M6 989 aa12.85□□□□□ -0.35
TUBB3-204ENST00000554116 SLC2A4RGQ9NR83 387 aa12.85□□□□□ -0.35
TUBB3-204ENST00000554116 KLK14Q9P0G3 267 aa12.85□□□□□ -0.35
TUBB3-204ENST00000554116 ADAM28Q9UKQ2 775 aa12.85□□□□□ -0.35
TUBB3-204ENST00000554116 SSX2IPQ9Y2D8 614 aa12.85□□□□□ -0.35
TUBB3-204ENST00000554116 NUMBLQ9Y6R0 609 aa12.85□□□□□ -0.35
TUBB3-204ENST00000554116 CHD6Q8TD26 2715 aa12.84□□□□□ -0.35
TUBB3-204ENST00000554116 F5P12259 2224 aa12.84□□□□□ -0.35
TUBB3-204ENST00000554116 A0A1B0GUA9 196 aa12.84□□□□□ -0.35
TUBB3-204ENST00000554116 SHISA7A6NL88 538 aa12.84□□□□□ -0.35
TUBB3-204ENST00000554116 PTGESO14684 152 aa12.84□□□□□ -0.35
TUBB3-204ENST00000554116 CCNT1O60563 726 aaKnown RBP12.84□□□□□ -0.35
TUBB3-204ENST00000554116 DKC1O60832 514 aaKnown RBP eCLIP12.84□□□□□ -0.35
TUBB3-204ENST00000554116 ZMYND10O75800 440 aa12.84□□□□□ -0.35
TUBB3-204ENST00000554116 LYPLA2O95372 231 aa12.84□□□□□ -0.35
TUBB3-204ENST00000554116 EDN1P05305 212 aa12.84□□□□□ -0.35
TUBB3-204ENST00000554116 FDPSP14324 419 aaKnown RBP12.84□□□□□ -0.35
TUBB3-204ENST00000554116 GCFC2P16383 781 aaKnown RBP12.84□□□□□ -0.35
TUBB3-204ENST00000554116 STARD6P59095 220 aa12.84□□□□□ -0.35
TUBB3-204ENST00000554116 GPC5P78333 572 aa12.84□□□□□ -0.35
TUBB3-204ENST00000554116 NR5A1Q13285 461 aa12.84□□□□□ -0.35
TUBB3-204ENST00000554116 USP41Q3LFD5 358 aa12.84□□□□□ -0.35
TUBB3-204ENST00000554116 SPECC1Q5M775 1068 aa12.84□□□□□ -0.35
TUBB3-204ENST00000554116 NCAPH2Q6IBW4 605 aa12.84□□□□□ -0.35
TUBB3-204ENST00000554116 PARM1Q6UWI2 310 aa12.84□□□□□ -0.35
TUBB3-204ENST00000554116 PIK3AP1Q6ZUJ8 805 aa12.84□□□□□ -0.35
TUBB3-204ENST00000554116 GET4Q7L5D6 327 aaPredicted RBP12.84□□□□□ -0.35
TUBB3-204ENST00000554116 EXOC8Q8IYI6 725 aa12.84□□□□□ -0.35
TUBB3-204ENST00000554116 DCLK2Q8N568 766 aa12.84□□□□□ -0.35
TUBB3-204ENST00000554116 SUMF1Q8NBK3 374 aa12.84□□□□□ -0.35
TUBB3-204ENST00000554116 LNX1Q8TBB1 728 aaPredicted RBP12.84□□□□□ -0.35
TUBB3-204ENST00000554116 RUBCNQ92622 972 aa12.84□□□□□ -0.35
TUBB3-204ENST00000554116 CCDC51Q96ER9 411 aa12.84□□□□□ -0.35
TUBB3-204ENST00000554116 EIF2AK1Q9BQI3 630 aaKnown RBP12.84□□□□□ -0.35
TUBB3-204ENST00000554116 DDX23Q9BUQ8 820 aaKnown RBP12.84□□□□□ -0.35
TUBB3-204ENST00000554116 COLEC11Q9BWP8 271 aa12.84□□□□□ -0.35
TUBB3-204ENST00000554116 NFKBIZQ9BYH8 718 aa12.84□□□□□ -0.35
TUBB3-204ENST00000554116 ARHGEF3Q9NR81 526 aa12.84□□□□□ -0.35
TUBB3-204ENST00000554116 ZDHHC7Q9NXF8 308 aa12.84□□□□□ -0.35
TUBB3-204ENST00000554116 DLL3Q9NYJ7 618 aa12.84□□□□□ -0.35
TUBB3-204ENST00000554116 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.84□□□□□ -0.353e-7■■■□□ 15.4
TUBB3-204ENST00000554116 MTF2Q9Y483 593 aaPredicted RBP12.84□□□□□ -0.35
TUBB3-204ENST00000554116 CCDC194A0A1B0GVG4 234 aa12.83□□□□□ -0.36
TUBB3-204ENST00000554116 INO80B-WBP1J3KQ70 363 aa12.83□□□□□ -0.36
TUBB3-204ENST00000554116 STK25O00506 426 aa12.83□□□□□ -0.36
TUBB3-204ENST00000554116 ERLIN2O94905 339 aa12.83□□□□□ -0.36
TUBB3-204ENST00000554116 NPTXRO95502 500 aa12.83□□□□□ -0.36
TUBB3-204ENST00000554116 XBP1P17861 261 aa12.83□□□□□ -0.36
TUBB3-204ENST00000554116 RARRES1P49788 294 aa12.83□□□□□ -0.36
TUBB3-204ENST00000554116 MXD4Q14582 209 aaPredicted RBP12.83□□□□□ -0.36
TUBB3-204ENST00000554116 PCBP1Q15365 356 aaKnown RBP eCLIP12.83□□□□□ -0.36
TUBB3-204ENST00000554116 ME3Q16798 604 aa12.83□□□□□ -0.36
TUBB3-204ENST00000554116 C8orf34Q49A92 452 aa12.83□□□□□ -0.36
TUBB3-204ENST00000554116 CD300LGQ6UXG3 332 aa12.83□□□□□ -0.36
TUBB3-204ENST00000554116 OTUD6AQ7L8S5 288 aa12.83□□□□□ -0.36
TUBB3-204ENST00000554116 GRASPQ7Z6J2 395 aaPredicted RBP12.83□□□□□ -0.36
TUBB3-204ENST00000554116 C1orf210Q8IVY1 113 aa12.83□□□□□ -0.36
TUBB3-204ENST00000554116 TPH2Q8IWU9 490 aa12.83□□□□□ -0.36
TUBB3-204ENST00000554116 NECAB1Q8N987 351 aa12.83□□□□□ -0.36
TUBB3-204ENST00000554116 PJA1Q8NG27 643 aa12.83□□□□□ -0.36
TUBB3-204ENST00000554116 STAMQ92783 540 aa12.83□□□□□ -0.36
TUBB3-204ENST00000554116 GPRC5CQ9NQ84 441 aa12.83□□□□□ -0.36
TUBB3-204ENST00000554116 FBXW11Q9UKB1 542 aa12.83□□□□□ -0.36
TUBB3-204ENST00000554116 USP20Q9Y2K6 914 aa12.83□□□□□ -0.36
TUBB3-204ENST00000554116 SIT1Q9Y3P8 196 aa12.83□□□□□ -0.36
TUBB3-204ENST00000554116 FRYQ5TBA9 3013 aa12.82□□□□□ -0.36
TUBB3-204ENST00000554116 KIF4AO95239 1232 aa12.82□□□□□ -0.36
TUBB3-204ENST00000554116 LARGE1O95461 756 aa12.82□□□□□ -0.36
TUBB3-204ENST00000554116 GRIK3Q13003 919 aa12.82□□□□□ -0.36
TUBB3-204ENST00000554116 SLC27A1Q6PCB7 646 aa12.82□□□□□ -0.36
TUBB3-204ENST00000554116 DCLRE1AQ6PJP8 1040 aa12.82□□□□□ -0.36
TUBB3-204ENST00000554116 RSPO2Q6UXX9 243 aaPredicted RBP12.82□□□□□ -0.36
TUBB3-204ENST00000554116 ITFG1Q8TB96 612 aa12.82□□□□□ -0.36
TUBB3-204ENST00000554116 PIGOQ8TEQ8 1089 aa12.82□□□□□ -0.36
TUBB3-204ENST00000554116 HASPINQ8TF76 798 aa12.82□□□□□ -0.36
TUBB3-204ENST00000554116 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.82□□□□□ -0.36
TUBB3-204ENST00000554116 ANKEF1Q9NU02 776 aa12.82□□□□□ -0.36
TUBB3-204ENST00000554116 DPP7Q9UHL4 492 aa12.82□□□□□ -0.36
TUBB3-204ENST00000554116 STK36Q9NRP7 1315 aa12.82□□□□□ -0.36
TUBB3-204ENST00000554116 ZMYM2Q9UBW7 1377 aa12.81□□□□□ -0.36
TUBB3-204ENST00000554116 SPATA31C1P0DKV0 1188 aa12.81□□□□□ -0.36
TUBB3-204ENST00000554116 FSHRP23945 695 aa12.81□□□□□ -0.36
TUBB3-204ENST00000554116 FZD5Q13467 585 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms