RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 CAPSQ13938 189 aa9.79□□□□□ -0.84
TDP1-208ENST00000553989 ANGPT1Q15389 498 aa9.79□□□□□ -0.84
TDP1-208ENST00000553989 CALCRLQ16602 461 aa9.79□□□□□ -0.84
TDP1-208ENST00000553989 FUT10Q6P4F1 479 aa9.79□□□□□ -0.84
TDP1-208ENST00000553989 MAEAQ7L5Y9 396 aa9.79□□□□□ -0.84
TDP1-208ENST00000553989 CDR2LQ86X02 465 aaPredicted RBP9.79□□□□□ -0.84
TDP1-208ENST00000553989 CCDC105Q8IYK2 499 aa9.79□□□□□ -0.84
TDP1-208ENST00000553989 CMASQ8NFW8 434 aaPredicted RBP9.79□□□□□ -0.84
TDP1-208ENST00000553989 KCNG4Q8TDN1 519 aa9.79□□□□□ -0.84
TDP1-208ENST00000553989 ASAP3Q8TDY4 903 aa9.79□□□□□ -0.84
TDP1-208ENST00000553989 RSAD2Q8WXG1 361 aa9.79□□□□□ -0.84
TDP1-208ENST00000553989 RIN2Q8WYP3 895 aaPredicted RBP9.79□□□□□ -0.84
TDP1-208ENST00000553989 B3GALT6Q96L58 329 aa9.79□□□□□ -0.84
TDP1-208ENST00000553989 EIF2AK1Q9BQI3 630 aaKnown RBP9.79□□□□□ -0.84
TDP1-208ENST00000553989 POLR3FQ9H1D9 316 aaPredicted RBP9.79□□□□□ -0.84
TDP1-208ENST00000553989 GRPEL1Q9HAV7 217 aa9.79□□□□□ -0.84
TDP1-208ENST00000553989 WDR6Q9NNW5 1121 aaKnown RBP9.79□□□□□ -0.84
TDP1-208ENST00000553989 XPNPEP1Q9NQW7 623 aa9.79□□□□□ -0.84
TDP1-208ENST00000553989 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.79□□□□□ -0.84
TDP1-208ENST00000553989 KLK14Q9P0G3 267 aa9.79□□□□□ -0.84
TDP1-208ENST00000553989 ORC3Q9UBD5 711 aaPredicted RBP9.79□□□□□ -0.84
TDP1-208ENST00000553989 CA14Q9ULX7 337 aa9.79□□□□□ -0.84
TDP1-208ENST00000553989 GIT1Q9Y2X7 761 aa9.79□□□□□ -0.84
TDP1-208ENST00000553989 PLXNA3P51805 1871 aa9.79□□□□□ -0.84
TDP1-208ENST00000553989 C2orf16Q68DN1 1984 aa9.78□□□□□ -0.84
TDP1-208ENST00000553989 FAM205CA6NFA0 338 aa9.78□□□□□ -0.84
TDP1-208ENST00000553989 LRRIQ4A6NIV6 560 aa9.78□□□□□ -0.84
TDP1-208ENST00000553989 B4GALT5O43286 388 aa9.78□□□□□ -0.84
TDP1-208ENST00000553989 TGM5O43548 720 aa9.78□□□□□ -0.84
TDP1-208ENST00000553989 TADA2AO75478 443 aa9.78□□□□□ -0.84
TDP1-208ENST00000553989 NPR3P17342 541 aa9.78□□□□□ -0.84
TDP1-208ENST00000553989 ARF4P18085 180 aaPredicted RBP9.78□□□□□ -0.84
TDP1-208ENST00000553989 RPL17P18621 184 aaKnown RBP9.78□□□□□ -0.84
TDP1-208ENST00000553989 TXKP42681 527 aa9.78□□□□□ -0.84
TDP1-208ENST00000553989 CREMQ03060 361 aa9.78□□□□□ -0.84
TDP1-208ENST00000553989 MBTD1Q05BQ5 628 aa9.78□□□□□ -0.84
TDP1-208ENST00000553989 DSC1Q08554 894 aa9.78□□□□□ -0.84
TDP1-208ENST00000553989 GRIK3Q13003 919 aa9.78□□□□□ -0.84
TDP1-208ENST00000553989 NR5A1Q13285 461 aa9.78□□□□□ -0.84
TDP1-208ENST00000553989 TRIM29Q14134 588 aa9.78□□□□□ -0.84
TDP1-208ENST00000553989 KLHL40Q2TBA0 621 aa9.78□□□□□ -0.84
TDP1-208ENST00000553989 USP41Q3LFD5 358 aa9.78□□□□□ -0.84
TDP1-208ENST00000553989 EARS2Q5JPH6 523 aaKnown RBP9.78□□□□□ -0.84
TDP1-208ENST00000553989 SPECC1Q5M775 1068 aa9.78□□□□□ -0.84
TDP1-208ENST00000553989 KIAA0319Q5VV43 1072 aa9.78□□□□□ -0.84
TDP1-208ENST00000553989 SLC27A1Q6PCB7 646 aa9.78□□□□□ -0.84
TDP1-208ENST00000553989 CYP26C1Q6V0L0 522 aa9.78□□□□□ -0.84
TDP1-208ENST00000553989 PLPP6Q8IY26 295 aa9.78□□□□□ -0.84
TDP1-208ENST00000553989 ADSSL1Q8N142 457 aa9.78□□□□□ -0.84
TDP1-208ENST00000553989 DTWD2Q8NBA8 298 aa9.78□□□□□ -0.84
TDP1-208ENST00000553989 HASPINQ8TF76 798 aa9.78□□□□□ -0.84
TDP1-208ENST00000553989 RABGGTAQ92696 567 aa9.78□□□□□ -0.84
TDP1-208ENST00000553989 INTS4Q96HW7 963 aaKnown RBP9.78□□□□□ -0.84
TDP1-208ENST00000553989 PLEKHA4Q9H4M7 779 aa9.78□□□□□ -0.84
TDP1-208ENST00000553989 TTC12Q9H892 705 aaPredicted RBP9.78□□□□□ -0.84
TDP1-208ENST00000553989 MIOSQ9NXC5 875 aa9.78□□□□□ -0.84
TDP1-208ENST00000553989 ADAM28Q9UKQ2 775 aa9.78□□□□□ -0.84
TDP1-208ENST00000553989 TPCN1Q9ULQ1 816 aa9.78□□□□□ -0.84
TDP1-208ENST00000553989 PCDHA12Q9UN75 941 aa9.78□□□□□ -0.84
TDP1-208ENST00000553989 ZFHX2Q9C0A1 2572 aaPredicted RBP9.77□□□□□ -0.84
TDP1-208ENST00000553989 ARID2Q68CP9 1835 aa9.77□□□□□ -0.84
TDP1-208ENST00000553989 CASTOR2A6NHX0 329 aa9.77□□□□□ -0.85
TDP1-208ENST00000553989 NEMFO60524 1076 aa9.77□□□□□ -0.85
TDP1-208ENST00000553989 PFKFB2O60825 505 aa9.77□□□□□ -0.85
TDP1-208ENST00000553989 N4BP1O75113 896 aaKnown RBP9.77□□□□□ -0.85
TDP1-208ENST00000553989 SLITRK3O94933 977 aa9.77□□□□□ -0.85
TDP1-208ENST00000553989 SRFP11831 508 aa9.77□□□□□ -0.85
TDP1-208ENST00000553989 LIG1P18858 919 aa9.77□□□□□ -0.85
TDP1-208ENST00000553989 GLRA2P23416 452 aa9.77□□□□□ -0.85
TDP1-208ENST00000553989 RARRES1P49788 294 aa9.77□□□□□ -0.85
TDP1-208ENST00000553989 SPIRE1Q08AE8 756 aa9.77□□□□□ -0.85
TDP1-208ENST00000553989 ANKRD1Q15327 319 aa9.77□□□□□ -0.85
TDP1-208ENST00000553989 LIN9Q5TKA1 542 aa9.77□□□□□ -0.85
TDP1-208ENST00000553989 CEP57Q86XR8 500 aa9.77□□□□□ -0.85
TDP1-208ENST00000553989 ZBTB8OSQ8IWT0 167 aa9.77□□□□□ -0.85
TDP1-208ENST00000553989 RNF168Q8IYW5 571 aaPredicted RBP9.77□□□□□ -0.85
TDP1-208ENST00000553989 ST13P5Q8NFI4 369 aaPredicted RBP9.77□□□□□ -0.85
TDP1-208ENST00000553989 PIGOQ8TEQ8 1089 aa9.77□□□□□ -0.85
TDP1-208ENST00000553989 MYADMQ96S97 322 aa9.77□□□□□ -0.85
TDP1-208ENST00000553989 HINFPQ9BQA5 517 aa9.77□□□□□ -0.85
TDP1-208ENST00000553989 TMEM121BQ9BXQ6 578 aaPredicted RBP9.77□□□□□ -0.85
TDP1-208ENST00000553989 GPR62Q9BZJ7 368 aa9.77□□□□□ -0.85
TDP1-208ENST00000553989 NT5C3AQ9H0P0 336 aa9.77□□□□□ -0.85
TDP1-208ENST00000553989 GZF1Q9H116 711 aaPredicted RBP9.77□□□□□ -0.85
TDP1-208ENST00000553989 TBC1D17Q9HA65 648 aa9.77□□□□□ -0.85
TDP1-208ENST00000553989 RXFP1Q9HBX9 757 aa9.77□□□□□ -0.85
TDP1-208ENST00000553989 ANKEF1Q9NU02 776 aa9.77□□□□□ -0.85
TDP1-208ENST00000553989 ZDHHC7Q9NXF8 308 aa9.77□□□□□ -0.85
TDP1-208ENST00000553989 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.77□□□□□ -0.85
TDP1-208ENST00000553989 EPS15L1Q9UBC2 864 aa9.77□□□□□ -0.85
TDP1-208ENST00000553989 WNT16Q9UBV4 365 aa9.77□□□□□ -0.85
TDP1-208ENST00000553989 POLIQ9UNA4 740 aa9.77□□□□□ -0.85
TDP1-208ENST00000553989 SF3B1O75533 1304 aaKnown RBP eCLIP9.77□□□□□ -0.85
TDP1-208ENST00000553989 A0A087WWV3 80 aa9.76□□□□□ -0.85
TDP1-208ENST00000553989 POTEMA6NI47 508 aa9.76□□□□□ -0.85
TDP1-208ENST00000553989 LYPLA2O95372 231 aa9.76□□□□□ -0.85
TDP1-208ENST00000553989 PDIA4P13667 645 aaKnown RBP9.76□□□□□ -0.85
TDP1-208ENST00000553989 ATP2B1P20020 1258 aa9.76□□□□□ -0.85
TDP1-208ENST00000553989 ARL2P36404 184 aa9.76□□□□□ -0.85
TDP1-208ENST00000553989 FOXK2Q01167 660 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms