RNA–Protein interactions for RNA: ENST00000553823.5

NEK9-202, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-202ENST00000553823 ERGIC2Q96RQ1 377 aa12.78□□□□□ -0.36
NEK9-202ENST00000553823 MCOLN1Q9GZU1 580 aa12.78□□□□□ -0.36
NEK9-202ENST00000553823 RBAKQ9NYW8 714 aaPredicted RBP12.78□□□□□ -0.36
NEK9-202ENST00000553823 IMPACTQ9P2X3 320 aa12.78□□□□□ -0.36
NEK9-202ENST00000553823 ITIH6Q6UXX5 1313 aa12.78□□□□□ -0.36
NEK9-202ENST00000553823 GPR182O15218 404 aa12.77□□□□□ -0.37
NEK9-202ENST00000553823 STX10O60499 249 aa12.77□□□□□ -0.37
NEK9-202ENST00000553823 PTMAP06454 111 aaKnown RBP12.77□□□□□ -0.37
NEK9-202ENST00000553823 CLTAP09496 248 aa12.77□□□□□ -0.37
NEK9-202ENST00000553823 COL6A1P12109 1028 aa12.77□□□□□ -0.37
NEK9-202ENST00000553823 TNFSF9P41273 254 aa12.77□□□□□ -0.37
NEK9-202ENST00000553823 FMO5P49326 533 aa12.77□□□□□ -0.37
NEK9-202ENST00000553823 ATN1P54259 1190 aaPredicted RBP12.77□□□□□ -0.37
NEK9-202ENST00000553823 DLG4P78352 724 aa12.77□□□□□ -0.37
NEK9-202ENST00000553823 BFSP2Q13515 415 aa12.77□□□□□ -0.37
NEK9-202ENST00000553823 PSMD6Q15008 389 aa12.77□□□□□ -0.37
NEK9-202ENST00000553823 SYCP1Q15431 976 aa12.77□□□□□ -0.37
NEK9-202ENST00000553823 SURF1Q15526 300 aa12.77□□□□□ -0.37
NEK9-202ENST00000553823 SEZ6Q53EL9 994 aa12.77□□□□□ -0.37
NEK9-202ENST00000553823 FBXO47Q5MNV8 452 aa12.77□□□□□ -0.37
NEK9-202ENST00000553823 C1orf220Q5T0J3 134 aa12.77□□□□□ -0.37
NEK9-202ENST00000553823 ZNF618Q5T7W0 954 aa12.77□□□□□ -0.37
NEK9-202ENST00000553823 SLC27A1Q6PCB7 646 aa12.77□□□□□ -0.37
NEK9-202ENST00000553823 CCDC155Q8N6L0 562 aa12.77□□□□□ -0.37
NEK9-202ENST00000553823 USP38Q8NB14 1042 aa12.77□□□□□ -0.37
NEK9-202ENST00000553823 PLEKHO2Q8TD55 490 aa12.77□□□□□ -0.37
NEK9-202ENST00000553823 DIS3LQ8TF46 1054 aaKnown RBP12.77□□□□□ -0.37
NEK9-202ENST00000553823 CCDC127Q96BQ5 260 aa12.77□□□□□ -0.37
NEK9-202ENST00000553823 CCDC51Q96ER9 411 aa12.77□□□□□ -0.37
NEK9-202ENST00000553823 FNBP1Q96RU3 617 aa12.77□□□□□ -0.37
NEK9-202ENST00000553823 CPSF3Q9UKF6 684 aaKnown RBP12.77□□□□□ -0.37
NEK9-202ENST00000553823 ST3GAL5Q9UNP4 418 aa12.77□□□□□ -0.37
NEK9-202ENST00000553823 PIN4Q9Y237 131 aaKnown RBP12.77□□□□□ -0.37
NEK9-202ENST00000553823 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.77□□□□□ -0.37
NEK9-202ENST00000553823 SQORQ9Y6N5 450 aa12.77□□□□□ -0.37
NEK9-202ENST00000553823 GTPBP10A4D1E9 387 aaKnown RBP12.76□□□□□ -0.37
NEK9-202ENST00000553823 LRRIQ3A6PVS8 624 aaPredicted RBP12.76□□□□□ -0.37
NEK9-202ENST00000553823 TULP1O00294 542 aaPredicted RBP12.76□□□□□ -0.37
NEK9-202ENST00000553823 PQBP1O60828 265 aaKnown RBP12.76□□□□□ -0.37
NEK9-202ENST00000553823 N4BP1O75113 896 aaKnown RBP12.76□□□□□ -0.37
NEK9-202ENST00000553823 NPTXRO95502 500 aa12.76□□□□□ -0.37
NEK9-202ENST00000553823 STAG3L1P0CL83 205 aa12.76□□□□□ -0.37
NEK9-202ENST00000553823 DLATP10515 647 aaKnown RBP12.76□□□□□ -0.37
NEK9-202ENST00000553823 GHRP10912 638 aa12.76□□□□□ -0.37
NEK9-202ENST00000553823 GTF2H1P32780 548 aa12.76□□□□□ -0.37
NEK9-202ENST00000553823 POU5F1Q01860 360 aaKnown RBP12.76□□□□□ -0.37
NEK9-202ENST00000553823 PPP3CAQ08209 521 aa12.76□□□□□ -0.37
NEK9-202ENST00000553823 NFX1Q12986 1120 aaKnown RBP12.76□□□□□ -0.37
NEK9-202ENST00000553823 C1orf53Q5VUE5 145 aa12.76□□□□□ -0.37
NEK9-202ENST00000553823 GBP6Q6ZN66 633 aa12.76□□□□□ -0.37
NEK9-202ENST00000553823 ANKRD33Q7Z3H0 272 aa12.76□□□□□ -0.37
NEK9-202ENST00000553823 CEP120Q8N960 986 aa12.76□□□□□ -0.37
NEK9-202ENST00000553823 PCMTD1Q96MG8 357 aaPredicted RBP12.76□□□□□ -0.37
NEK9-202ENST00000553823 C11orf49Q9H6J7 331 aa12.76□□□□□ -0.37
NEK9-202ENST00000553823 MMRN2Q9H8L6 949 aa12.76□□□□□ -0.37
NEK9-202ENST00000553823 RPF1Q9H9Y2 349 aaKnown RBP12.76□□□□□ -0.37
NEK9-202ENST00000553823 PDE11AQ9HCR9 933 aa12.76□□□□□ -0.37
NEK9-202ENST00000553823 ERVK-5Q9HDB9 667 aa12.76□□□□□ -0.37
NEK9-202ENST00000553823 CHST12Q9NRB3 414 aa12.76□□□□□ -0.37
NEK9-202ENST00000553823 SIK3Q9Y2K2 1263 aa12.76□□□□□ -0.37
NEK9-202ENST00000553823 DCDC2CA8MYV0 355 aa12.75□□□□□ -0.37
NEK9-202ENST00000553823 PMM2O15305 246 aa12.75□□□□□ -0.37
NEK9-202ENST00000553823 P4HA2O15460 535 aa12.75□□□□□ -0.37
NEK9-202ENST00000553823 SELPP16109 830 aa12.75□□□□□ -0.37
NEK9-202ENST00000553823 GRM5P41594 1212 aa12.75□□□□□ -0.37
NEK9-202ENST00000553823 GCLMP48507 274 aa12.75□□□□□ -0.37
NEK9-202ENST00000553823 MXI1P50539 228 aa12.75□□□□□ -0.37
NEK9-202ENST00000553823 GSDMDP57764 484 aa12.75□□□□□ -0.37
NEK9-202ENST00000553823 OSTNP61366 133 aa12.75□□□□□ -0.37
NEK9-202ENST00000553823 CLDN10P78369 228 aa12.75□□□□□ -0.37
NEK9-202ENST00000553823 MYL7Q01449 175 aa12.75□□□□□ -0.37
NEK9-202ENST00000553823 KCNMA1Q12791 1236 aa12.75□□□□□ -0.37
NEK9-202ENST00000553823 CETN1Q12798 172 aa12.75□□□□□ -0.37
NEK9-202ENST00000553823 PAK2Q13177 524 aa12.75□□□□□ -0.37
NEK9-202ENST00000553823 TBX2Q13207 712 aaPredicted RBP12.75□□□□□ -0.37
NEK9-202ENST00000553823 TRIM14Q14142 442 aa12.75□□□□□ -0.37
NEK9-202ENST00000553823 LPIN1Q14693 890 aa12.75□□□□□ -0.37
NEK9-202ENST00000553823 ENOX2Q16206 610 aaKnown RBP12.75□□□□□ -0.37
NEK9-202ENST00000553823 EXOC3L4Q17RC7 722 aa12.75□□□□□ -0.37
NEK9-202ENST00000553823 CBWD6Q4V339 395 aa12.75□□□□□ -0.37
NEK9-202ENST00000553823 CBWD3Q5JTY5 395 aa12.75□□□□□ -0.37
NEK9-202ENST00000553823 CBWD5Q5RIA9 395 aa12.75□□□□□ -0.37
NEK9-202ENST00000553823 TRAF7Q6Q0C0 670 aa12.75□□□□□ -0.37
NEK9-202ENST00000553823 PPFIBP1Q86W92 1011 aa12.75□□□□□ -0.37
NEK9-202ENST00000553823 TET1Q8NFU7 2136 aa12.75□□□□□ -0.37
NEK9-202ENST00000553823 PAWRQ96IZ0 340 aaKnown RBP12.75□□□□□ -0.37
NEK9-202ENST00000553823 TOX2Q96NM4 488 aa12.75□□□□□ -0.37
NEK9-202ENST00000553823 ACAP3Q96P50 834 aa12.75□□□□□ -0.37
NEK9-202ENST00000553823 POP1Q99575 1024 aaKnown RBP12.75□□□□□ -0.37
NEK9-202ENST00000553823 CRACR2AQ9BSW2 395 aa12.75□□□□□ -0.37
NEK9-202ENST00000553823 NUP58Q9BVL2 599 aa12.75□□□□□ -0.37
NEK9-202ENST00000553823 CCDC94Q9BW85 323 aaPredicted RBP12.75□□□□□ -0.37
NEK9-202ENST00000553823 EIF2AQ9BY44 585 aaKnown RBP12.75□□□□□ -0.37
NEK9-202ENST00000553823 TRIM6Q9C030 488 aaPredicted RBP12.75□□□□□ -0.37
NEK9-202ENST00000553823 AGO3Q9H9G7 860 aaKnown RBP12.75□□□□□ -0.37
NEK9-202ENST00000553823 TMEM8AQ9HCN3 771 aa12.75□□□□□ -0.37
NEK9-202ENST00000553823 RALGAPA2Q2PPJ7 1873 aa12.74□□□□□ -0.37
NEK9-202ENST00000553823 IL18RAPO95256 599 aa12.74□□□□□ -0.37
NEK9-202ENST00000553823 CXCL8P10145 99 aa12.74□□□□□ -0.37
NEK9-202ENST00000553823 ZSCAN20P17040 1043 aaPredicted RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms