RNA–Protein interactions for RNA: ENST00000553622.5

CHD8-204, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-204ENST00000553622 KIAA1586Q9HCI6 787 aa10.63□□□□□ -0.71
CHD8-204ENST00000553622 PTPRHQ9HD43 1115 aa10.63□□□□□ -0.71
CHD8-204ENST00000553622 RBAKQ9NYW8 714 aaPredicted RBP10.63□□□□□ -0.71
CHD8-204ENST00000553622 IFNKQ9P0W0 207 aa10.63□□□□□ -0.71
CHD8-204ENST00000553622 PCDH10Q9P2E7 1040 aa10.63□□□□□ -0.71
CHD8-204ENST00000553622 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.63□□□□□ -0.71
CHD8-204ENST00000553622 STYXL1Q9Y6J8 313 aa10.63□□□□□ -0.71
CHD8-204ENST00000553622 TRIM43BA6NCK2 446 aa10.62□□□□□ -0.71
CHD8-204ENST00000553622 ABLIM1O14639 778 aa10.62□□□□□ -0.71
CHD8-204ENST00000553622 CLSTN1O94985 981 aa10.62□□□□□ -0.71
CHD8-204ENST00000553622 TIMP1P01033 207 aa10.62□□□□□ -0.71
CHD8-204ENST00000553622 TRIM49P0CI25 452 aa10.62□□□□□ -0.71
CHD8-204ENST00000553622 TRIM49CP0CI26 452 aa10.62□□□□□ -0.71
CHD8-204ENST00000553622 STAG3L1P0CL83 205 aa10.62□□□□□ -0.71
CHD8-204ENST00000553622 CXCL8P10145 99 aa10.62□□□□□ -0.71
CHD8-204ENST00000553622 DLATP10515 647 aaKnown RBP10.62□□□□□ -0.71
CHD8-204ENST00000553622 VAMP7P51809 220 aa10.62□□□□□ -0.71
CHD8-204ENST00000553622 COPB1P53618 953 aaKnown RBP10.62□□□□□ -0.71
CHD8-204ENST00000553622 UBASH3AP57075 661 aa10.62□□□□□ -0.71
CHD8-204ENST00000553622 CYP24A1Q07973 514 aa10.62□□□□□ -0.71
CHD8-204ENST00000553622 INTS8Q75QN2 995 aaKnown RBP10.62□□□□□ -0.71
CHD8-204ENST00000553622 FRMD5Q7Z6J6 570 aa10.62□□□□□ -0.71
CHD8-204ENST00000553622 HACE1Q8IYU2 909 aa10.62□□□□□ -0.71
CHD8-204ENST00000553622 ANP32BQ92688 251 aaKnown RBP10.62□□□□□ -0.71
CHD8-204ENST00000553622 DPF3Q92784 378 aa10.62□□□□□ -0.71
CHD8-204ENST00000553622 TRIM43Q96BQ3 446 aaPredicted RBP10.62□□□□□ -0.71
CHD8-204ENST00000553622 ACAP3Q96P50 834 aa10.62□□□□□ -0.71
CHD8-204ENST00000553622 FNBP1Q96RU3 617 aa10.62□□□□□ -0.71
CHD8-204ENST00000553622 HTATIP2Q9BUP3 242 aa10.62□□□□□ -0.71
CHD8-204ENST00000553622 TMX1Q9H3N1 280 aa10.62□□□□□ -0.71
CHD8-204ENST00000553622 NXF3Q9H4D5 531 aaKnown RBP10.62□□□□□ -0.71
CHD8-204ENST00000553622 CHST12Q9NRB3 414 aa10.62□□□□□ -0.71
CHD8-204ENST00000553622 SNTG2Q9NY99 539 aa10.62□□□□□ -0.71
CHD8-204ENST00000553622 PARP2Q9UGN5 583 aa10.62□□□□□ -0.71
CHD8-204ENST00000553622 HES2Q9Y543 173 aa10.62□□□□□ -0.71
CHD8-204ENST00000553622 PCDHB2Q9Y5E7 798 aa10.62□□□□□ -0.71
CHD8-204ENST00000553622 SQORQ9Y6N5 450 aa10.62□□□□□ -0.71
CHD8-204ENST00000553622 TTC3P53804 2025 aa10.62□□□□□ -0.71
CHD8-204ENST00000553622 KIAA0355O15063 1070 aa10.61□□□□□ -0.71
CHD8-204ENST00000553622 CBFA2T2O43439 604 aa10.61□□□□□ -0.71
CHD8-204ENST00000553622 EVI5O60447 810 aa10.61□□□□□ -0.71
CHD8-204ENST00000553622 MGEA5O60502 916 aa10.61□□□□□ -0.71
CHD8-204ENST00000553622 PARNO95453 639 aaKnown RBP10.61□□□□□ -0.71
CHD8-204ENST00000553622 TPM3P06753 285 aa10.61□□□□□ -0.71
CHD8-204ENST00000553622 CLTAP09496 248 aa10.61□□□□□ -0.71
CHD8-204ENST00000553622 AKAP5P24588 427 aa10.61□□□□□ -0.71
CHD8-204ENST00000553622 YARSP54577 528 aaKnown RBP10.61□□□□□ -0.71
CHD8-204ENST00000553622 BFSP1Q12934 665 aa10.61□□□□□ -0.71
CHD8-204ENST00000553622 MAN2A1Q16706 1144 aa10.61□□□□□ -0.71
CHD8-204ENST00000553622 KYAT1Q16773 422 aa10.61□□□□□ -0.71
CHD8-204ENST00000553622 UBXN11Q5T124 520 aa10.61□□□□□ -0.71
CHD8-204ENST00000553622 USP37Q86T82 979 aa10.61□□□□□ -0.71
CHD8-204ENST00000553622 TMEM192Q8IY95 271 aa10.61□□□□□ -0.71
CHD8-204ENST00000553622 TMEM199Q8N511 208 aa10.61□□□□□ -0.71
CHD8-204ENST00000553622 DBF4BQ8NFT6 615 aa10.61□□□□□ -0.71
CHD8-204ENST00000553622 PCMTD1Q96MG8 357 aaPredicted RBP10.61□□□□□ -0.71
CHD8-204ENST00000553622 PDE11AQ9HCR9 933 aa10.61□□□□□ -0.71
CHD8-204ENST00000553622 FAM105AQ9NUU6 356 aa10.61□□□□□ -0.71
CHD8-204ENST00000553622 KLK14Q9P0G3 267 aa10.61□□□□□ -0.71
CHD8-204ENST00000553622 LIMA1Q9UHB6 759 aaKnown RBP10.61□□□□□ -0.71
CHD8-204ENST00000553622 CPSF3Q9UKF6 684 aaKnown RBP10.61□□□□□ -0.71
CHD8-204ENST00000553622 IPPQ9Y573 584 aa10.61□□□□□ -0.71
CHD8-204ENST00000553622 FNDC1Q4ZHG4 1894 aaPredicted RBP10.61□□□□□ -0.71
CHD8-204ENST00000553622 MAPK13O15264 365 aa10.6□□□□□ -0.71
CHD8-204ENST00000553622 RECQL4O94761 1208 aa10.6□□□□□ -0.71
CHD8-204ENST00000553622 ITGA4P13612 1032 aa10.6□□□□□ -0.71
CHD8-204ENST00000553622 CSF2RAP15509 400 aa10.6□□□□□ -0.71
CHD8-204ENST00000553622 SYN1P17600 705 aa10.6□□□□□ -0.71
CHD8-204ENST00000553622 TNNI1P19237 187 aa10.6□□□□□ -0.71
CHD8-204ENST00000553622 RFC2P35250 354 aa10.6□□□□□ -0.71
CHD8-204ENST00000553622 GRM5P41594 1212 aa10.6□□□□□ -0.71
CHD8-204ENST00000553622 DLG4P78352 724 aa10.6□□□□□ -0.71
CHD8-204ENST00000553622 UBXN1Q04323 297 aa10.6□□□□□ -0.71
CHD8-204ENST00000553622 PPP2R3AQ06190 1150 aa10.6□□□□□ -0.71
CHD8-204ENST00000553622 DSC3Q14574 896 aa10.6□□□□□ -0.71
CHD8-204ENST00000553622 ENOX2Q16206 610 aaKnown RBP10.6□□□□□ -0.71
CHD8-204ENST00000553622 PTPN21Q16825 1174 aa10.6□□□□□ -0.71
CHD8-204ENST00000553622 VWA3BQ502W6 1294 aa10.6□□□□□ -0.71
CHD8-204ENST00000553622 PLEKHG4Q58EX7 1191 aa10.6□□□□□ -0.71
CHD8-204ENST00000553622 FKBP15Q5T1M5 1219 aa10.6□□□□□ -0.71
CHD8-204ENST00000553622 LMBRD2Q68DH5 695 aaPredicted RBP10.6□□□□□ -0.71
CHD8-204ENST00000553622 CRELD2Q6UXH1 353 aaPredicted RBP10.6□□□□□ -0.71
CHD8-204ENST00000553622 BRSK2Q8IWQ3 736 aa10.6□□□□□ -0.71
CHD8-204ENST00000553622 TRIM59Q8IWR1 403 aa10.6□□□□□ -0.71
CHD8-204ENST00000553622 DRC7Q8IY82 874 aa10.6□□□□□ -0.71
CHD8-204ENST00000553622 APBB2Q92870 758 aa10.6□□□□□ -0.71
CHD8-204ENST00000553622 LPPQ93052 612 aa10.6□□□□□ -0.71
CHD8-204ENST00000553622 MFSD14AQ96MC6 490 aa10.6□□□□□ -0.71
CHD8-204ENST00000553622 FBXL18Q96ME1 805 aa10.6□□□□□ -0.71
CHD8-204ENST00000553622 NAP1L5Q96NT1 182 aaPredicted RBP10.6□□□□□ -0.71
CHD8-204ENST00000553622 POP1Q99575 1024 aaKnown RBP10.6□□□□□ -0.71
CHD8-204ENST00000553622 FTHL17Q9BXU8 183 aa10.6□□□□□ -0.71
CHD8-204ENST00000553622 XPO4Q9C0E2 1151 aaKnown RBP10.6□□□□□ -0.71
CHD8-204ENST00000553622 TOPORSQ9NS56 1045 aaPredicted RBP10.6□□□□□ -0.71
CHD8-204ENST00000553622 ZMYND8Q9ULU4 1186 aaPredicted RBP10.6□□□□□ -0.71
CHD8-204ENST00000553622 PTPRSQ13332 1948 aa10.6□□□□□ -0.71
CHD8-204ENST00000553622 SCN1AP35498 2009 aa10.6□□□□□ -0.71
CHD8-204ENST00000553622 LGALS16A8MUM7 142 aa10.59□□□□□ -0.71
CHD8-204ENST00000553622 LACTBL1A8MY62 500 aa10.59□□□□□ -0.71
CHD8-204ENST00000553622 AP5Z1O43299 807 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms