RNA–Protein interactions for RNA: ENST00000553578.5

RDH11-204, Transcript of retinol dehydrogenase 11, humanhuman

TSL 1 (best)

Gene RDH11, Length 4,035 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-204ENST00000553578 ZNF280CQ8ND82 737 aa4.34□□□□□ -1.71
RDH11-204ENST00000553578 NSMCE1Q8WV22 266 aa4.34□□□□□ -1.71
RDH11-204ENST00000553578 LPIN2Q92539 896 aa4.34□□□□□ -1.71
RDH11-204ENST00000553578 MUL1Q969V5 352 aa4.34□□□□□ -1.71
RDH11-204ENST00000553578 FUCA2Q9BTY2 467 aa4.34□□□□□ -1.71
RDH11-204ENST00000553578 MRIQ9BWK5 157 aa4.34□□□□□ -1.71
RDH11-204ENST00000553578 DRC3Q9H069 523 aa4.34□□□□□ -1.71
RDH11-204ENST00000553578 VPS11Q9H270 941 aa4.34□□□□□ -1.71
RDH11-204ENST00000553578 VCX3BQ9H321 246 aa4.34□□□□□ -1.71
RDH11-204ENST00000553578 RPAP3Q9H6T3 665 aaPredicted RBP4.34□□□□□ -1.71
RDH11-204ENST00000553578 PREBQ9HCU5 417 aa4.34□□□□□ -1.71
RDH11-204ENST00000553578 KCNH4Q9UQ05 1017 aa4.34□□□□□ -1.71
RDH11-204ENST00000553578 TCHHQ07283 1943 aa4.34□□□□□ -1.71
RDH11-204ENST00000553578 VPS37CA5D8V6 355 aaPredicted RBP4.34□□□□□ -1.71
RDH11-204ENST00000553578 USP27XA6NNY8 438 aa4.34□□□□□ -1.71
RDH11-204ENST00000553578 FAM25EA8MYX2 175 aa4.34□□□□□ -1.71
RDH11-204ENST00000553578 BIN1O00499 593 aa4.34□□□□□ -1.71
RDH11-204ENST00000553578 DDX3YO15523 660 aaKnown RBP4.34□□□□□ -1.71
RDH11-204ENST00000553578 PFKFB2O60825 505 aa4.34□□□□□ -1.71
RDH11-204ENST00000553578 TMCC1O94876 653 aa4.34□□□□□ -1.71
RDH11-204ENST00000553578 KRT14P02533 472 aa4.34□□□□□ -1.71
RDH11-204ENST00000553578 HSPA8P11142 646 aaKnown RBP4.34□□□□□ -1.71
RDH11-204ENST00000553578 IDH3AP50213 366 aa4.34□□□□□ -1.71
RDH11-204ENST00000553578 PLIN5Q00G26 463 aa4.34□□□□□ -1.71
RDH11-204ENST00000553578 GAS6Q14393 721 aa4.34□□□□□ -1.71
RDH11-204ENST00000553578 PDXDC1Q6P996 788 aa4.34□□□□□ -1.71
RDH11-204ENST00000553578 LMBR1LQ6UX01 489 aa4.34□□□□□ -1.71
RDH11-204ENST00000553578 KIF6Q6ZMV9 814 aa4.34□□□□□ -1.71
RDH11-204ENST00000553578 HFE2Q6ZVN8 426 aa4.34□□□□□ -1.71
RDH11-204ENST00000553578 NCCRP1Q6ZVX7 275 aaPredicted RBP4.34□□□□□ -1.71
RDH11-204ENST00000553578 B4GALNT4Q76KP1 1039 aa4.34□□□□□ -1.71
RDH11-204ENST00000553578 EEPD1Q7L9B9 569 aa4.34□□□□□ -1.71
RDH11-204ENST00000553578 ETFBKMTQ8IXQ9 262 aa4.34□□□□□ -1.71
RDH11-204ENST00000553578 ZNF713Q8N859 430 aaPredicted RBP4.34□□□□□ -1.71
RDH11-204ENST00000553578 TRPM4Q8TD43 1214 aa4.34□□□□□ -1.71
RDH11-204ENST00000553578 TEKT4Q8WW24 435 aa4.34□□□□□ -1.71
RDH11-204ENST00000553578 ELMO3Q96BJ8 720 aa4.34□□□□□ -1.71
RDH11-204ENST00000553578 UTP14AQ9BVJ6 771 aaKnown RBP4.34□□□□□ -1.71
RDH11-204ENST00000553578 ANO10Q9NW15 660 aa4.34□□□□□ -1.71
RDH11-204ENST00000553578 TUBGCP4Q9UGJ1 667 aa4.34□□□□□ -1.71
RDH11-204ENST00000553578 R3HDM2Q9Y2K5 976 aaKnown RBP4.34□□□□□ -1.71
RDH11-204ENST00000553578 TRAF6Q9Y4K3 522 aa4.34□□□□□ -1.71
RDH11-204ENST00000553578 FER1L6Q2WGJ9 1857 aa4.34□□□□□ -1.71
RDH11-204ENST00000553578 A0A0D9SFI3 127 aa4.34□□□□□ -1.72
RDH11-204ENST00000553578 RNF113AO15541 343 aaKnown RBP4.34□□□□□ -1.72
RDH11-204ENST00000553578 ATP2C2O75185 946 aa4.34□□□□□ -1.72
RDH11-204ENST00000553578 SLC5A1P13866 664 aa4.34□□□□□ -1.72
RDH11-204ENST00000553578 ID4P47928 161 aa4.34□□□□□ -1.72
RDH11-204ENST00000553578 CTBSQ01459 385 aa4.34□□□□□ -1.72
RDH11-204ENST00000553578 CAMK2GQ13555 558 aaPredicted RBP4.34□□□□□ -1.72
RDH11-204ENST00000553578 LRP8Q14114 963 aa4.34□□□□□ -1.72
RDH11-204ENST00000553578 SLC44A4Q53GD3 710 aa4.34□□□□□ -1.72
RDH11-204ENST00000553578 GRAMD4Q6IC98 578 aa4.34□□□□□ -1.72
RDH11-204ENST00000553578 FBXL19Q6PCT2 694 aa4.34□□□□□ -1.72
RDH11-204ENST00000553578 BZW1Q7L1Q6 419 aaKnown RBP4.34□□□□□ -1.72
RDH11-204ENST00000553578 BTLAQ7Z6A9 289 aa4.34□□□□□ -1.72
RDH11-204ENST00000553578 LINC00116Q8NCU8 138 aa4.34□□□□□ -1.72
RDH11-204ENST00000553578 MAIP1Q8WWC4 291 aa4.34□□□□□ -1.72
RDH11-204ENST00000553578 HVCN1Q96D96 273 aa4.34□□□□□ -1.72
RDH11-204ENST00000553578 C8orf48Q96LL4 319 aa4.34□□□□□ -1.72
RDH11-204ENST00000553578 CLIC6Q96NY7 704 aa4.34□□□□□ -1.72
RDH11-204ENST00000553578 UPF3BQ9BZI7 483 aaKnown RBP4.34□□□□□ -1.72
RDH11-204ENST00000553578 NDEL1Q9GZM8 345 aa4.34□□□□□ -1.72
RDH11-204ENST00000553578 DHX36Q9H2U1 1008 aaKnown RBP4.34□□□□□ -1.72
RDH11-204ENST00000553578 COMMD8Q9NX08 183 aa4.34□□□□□ -1.72
RDH11-204ENST00000553578 ZMAT5Q9UDW3 170 aaKnown RBP4.34□□□□□ -1.72
RDH11-204ENST00000553578 STK17AQ9UEE5 414 aa4.34□□□□□ -1.72
RDH11-204ENST00000553578 DNM3Q9UQ16 869 aa4.34□□□□□ -1.72
RDH11-204ENST00000553578 ZBTB1Q9Y2K1 713 aa4.34□□□□□ -1.72
RDH11-204ENST00000553578 ATP6V0A2Q9Y487 856 aa4.34□□□□□ -1.72
RDH11-204ENST00000553578 BLACEA4D250 179 aa4.33□□□□□ -1.72
RDH11-204ENST00000553578 TRIM43BA6NCK2 446 aa4.33□□□□□ -1.72
RDH11-204ENST00000553578 GOLGA8AA7E2F4 631 aa4.33□□□□□ -1.72
RDH11-204ENST00000553578 GOLGA8BA8MQT2 603 aa4.33□□□□□ -1.72
RDH11-204ENST00000553578 PIP5K1CO60331 668 aa4.33□□□□□ -1.72
RDH11-204ENST00000553578 PGRP06401 933 aa4.33□□□□□ -1.72
RDH11-204ENST00000553578 KRT15P19012 456 aa4.33□□□□□ -1.72
RDH11-204ENST00000553578 RXRAP19793 462 aa4.33□□□□□ -1.72
RDH11-204ENST00000553578 FMR1Q06787 632 aaKnown RBP eCLIP4.33□□□□□ -1.72
RDH11-204ENST00000553578 KLC1Q07866 573 aa4.33□□□□□ -1.72
RDH11-204ENST00000553578 BNIP1Q12981 228 aa4.33□□□□□ -1.72
RDH11-204ENST00000553578 NMIQ13287 307 aaPredicted RBP4.33□□□□□ -1.72
RDH11-204ENST00000553578 ITGA7Q13683 1181 aa4.33□□□□□ -1.72
RDH11-204ENST00000553578 INAQ16352 499 aa4.33□□□□□ -1.72
RDH11-204ENST00000553578 MAP1SQ66K74 1059 aaPredicted RBP4.33□□□□□ -1.72
RDH11-204ENST00000553578 ZNF365Q70YC5 407 aa4.33□□□□□ -1.72
RDH11-204ENST00000553578 UBE2R2Q712K3 238 aaPredicted RBP4.33□□□□□ -1.72
RDH11-204ENST00000553578 UBE3BQ7Z3V4 1068 aa4.33□□□□□ -1.72
RDH11-204ENST00000553578 KRT27Q7Z3Y8 459 aa4.33□□□□□ -1.72
RDH11-204ENST00000553578 CPLX4Q7Z7G2 160 aa4.33□□□□□ -1.72
RDH11-204ENST00000553578 AACSQ86V21 672 aa4.33□□□□□ -1.72
RDH11-204ENST00000553578 MB21D2Q8IYB1 491 aaPredicted RBP4.33□□□□□ -1.72
RDH11-204ENST00000553578 SMYD1Q8NB12 490 aa4.33□□□□□ -1.72
RDH11-204ENST00000553578 ABHD8Q96I13 439 aa4.33□□□□□ -1.72
RDH11-204ENST00000553578 SEC16BQ96JE7 1060 aa4.33□□□□□ -1.72
RDH11-204ENST00000553578 CTAGE1Q96RT6 745 aa4.33□□□□□ -1.72
RDH11-204ENST00000553578 ZNF304Q9HCX3 659 aa4.33□□□□□ -1.72
RDH11-204ENST00000553578 TYW1Q9NV66 732 aaKnown RBP4.33□□□□□ -1.72
RDH11-204ENST00000553578 PAG1Q9NWQ8 432 aa4.33□□□□□ -1.72
RDH11-204ENST00000553578 COQ3Q9NZJ6 369 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms